RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 HOMER3Q9NSC5 361 aa16.02■□□□□ 0.16
PTPN9-206ENST00000618819 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
PTPN9-206ENST00000618819 TAF11Q15544 211 aa16.02■□□□□ 0.16
PTPN9-206ENST00000618819 SYCE1Q8N0S2 351 aa16.02■□□□□ 0.16
PTPN9-206ENST00000618819 PPWD1Q96BP3 646 aaKnown RBP16.02■□□□□ 0.16
PTPN9-206ENST00000618819 PAG1Q9NWQ8 432 aa16.02■□□□□ 0.16
PTPN9-206ENST00000618819 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.16
PTPN9-206ENST00000618819 IFNAR2P48551 515 aa16.02■□□□□ 0.16
PTPN9-206ENST00000618819 CCNT1O60563 726 aaKnown RBP16.02■□□□□ 0.15
PTPN9-206ENST00000618819 DMTNQ08495 405 aa16.02■□□□□ 0.15
PTPN9-206ENST00000618819 FAM173BQ6P4H8 233 aa16.02■□□□□ 0.15
PTPN9-206ENST00000618819 WAPLQ7Z5K2 1190 aa16.02■□□□□ 0.15
PTPN9-206ENST00000618819 SPATS2Q86XZ4 545 aaKnown RBP16.02■□□□□ 0.15
PTPN9-206ENST00000618819 POMGNT1Q8WZA1 660 aa16.02■□□□□ 0.15
PTPN9-206ENST00000618819 IFIH1Q9BYX4 1025 aaKnown RBP16.02■□□□□ 0.15
PTPN9-206ENST00000618819 INTUQ9ULD6 942 aa16.02■□□□□ 0.15
PTPN9-206ENST00000618819 EEF1B2P24534 225 aaKnown RBP16.02■□□□□ 0.15
PTPN9-206ENST00000618819 FAM133BQ5BKY9 247 aaKnown RBP16.02■□□□□ 0.15
PTPN9-206ENST00000618819 CEP70Q8NHQ1 597 aa16.02■□□□□ 0.15
PTPN9-206ENST00000618819 RSAD2Q8WXG1 361 aa16.02■□□□□ 0.15
PTPN9-206ENST00000618819 NUDT16Q96DE0 195 aaKnown RBP16.02■□□□□ 0.15
PTPN9-206ENST00000618819 PARP2Q9UGN5 583 aa16.02■□□□□ 0.15
PTPN9-206ENST00000618819 SLC8A3P57103 927 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTPN9-206ENST00000618819 NUP58Q9BVL2 599 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ATAD2Q6PL18 1390 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 KCNK3O14649 394 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 GADD45BO75293 160 aaPredicted RBP16.01■□□□□ 0.15
PTPN9-206ENST00000618819 IFNB1P01574 187 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ADCY1Q08828 1119 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 NME9Q86XW9 330 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 HAUS1Q96CS2 278 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 CCDC138Q96M89 665 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 SCOCQ9UIL1 159 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 PA2G4Q9UQ80 394 aaKnown RBP16.01■□□□□ 0.15
PTPN9-206ENST00000618819 PIK3R4Q99570 1358 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 BUB1O43683 1085 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 SEC24BO95487 1268 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ANKRD20A4Q4UJ75 823 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ANKRD20A8PQ5CZ79 823 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ANKRD20A2Q5SQ80 823 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ANKRD20A1Q5TYW2 823 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 SEC31AO94979 1220 aaKnown RBP16.01■□□□□ 0.15
PTPN9-206ENST00000618819 RSBN1LQ6PCB5 846 aaPredicted RBP16.01■□□□□ 0.15
PTPN9-206ENST00000618819 SART1O43290 800 aaKnown RBP16.01■□□□□ 0.15
PTPN9-206ENST00000618819 TTC4O95801 387 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ARHGAP4P98171 946 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 IFT122Q9HBG6 1241 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 ADCY8P40145 1251 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 NLRP12P59046 1061 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 IWS1Q96ST2 819 aa16.01■□□□□ 0.15
PTPN9-206ENST00000618819 KRIT1O00522 736 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 ESRRGP62508 458 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 SFMBT2Q5VUG0 894 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 FBXO41Q8TF61 875 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 PIK3R5Q8WYR1 880 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 PIK3AP1Q6ZUJ8 805 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 EIF2AQ9BY44 585 aaKnown RBP16■□□□□ 0.15
PTPN9-206ENST00000618819 KRT82Q9NSB4 513 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16■□□□□ 0.15
PTPN9-206ENST00000618819 ARHGAP44Q17R89 818 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 TSKSQ9UJT2 592 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 THAP12O43422 761 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 CWF19L2Q2TBE0 894 aaKnown RBP16■□□□□ 0.15
PTPN9-206ENST00000618819 RRAGAQ7L523 313 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 LRRC8CQ8TDW0 803 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 FAM207AQ9NSI2 230 aaPredicted RBP16■□□□□ 0.15
PTPN9-206ENST00000618819 GNGT2O14610 69 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 CNGA1P29973 690 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 LRMPQ12912 555 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 AFAP1Q8N556 730 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 MAGEB6Q8N7X4 407 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 GNA11P29992 359 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 FOXD4Q12950 439 aaPredicted RBP16■□□□□ 0.15
PTPN9-206ENST00000618819 CEP19Q96LK0 163 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 YY1AP1Q9H869 796 aa16■□□□□ 0.15
PTPN9-206ENST00000618819 ABCB4P21439 1286 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 DYMQ7RTS9 669 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 NELFBQ8WX92 580 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 NLRC4Q9NPP4 1024 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 GRM1Q13255 1194 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 FAM69CQ0P6D2 419 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 NELFCDQ8IXH7 590 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 NFE2L3Q9Y4A8 694 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 LRRC9Q6ZRR7 1453 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 PHBP35232 272 aa15.99■□□□□ 0.15
PTPN9-206ENST00000618819 ZNF215Q9UL58 517 aaPredicted RBP15.99■□□□□ 0.15
PTPN9-206ENST00000618819 PLCD1P51178 756 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 ANO1Q5XXA6 986 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 PALMDQ9NP74 551 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 MAP3K7CLP57077 242 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 ZKSCAN8Q15776 578 aaPredicted RBP15.98■□□□□ 0.15
PTPN9-206ENST00000618819 TMEM259Q4ZIN3 620 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 HELBQ8NG08 1087 aaPredicted RBP15.98■□□□□ 0.15
PTPN9-206ENST00000618819 HDAC11Q96DB2 347 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 MCM9Q9NXL9 1143 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 AMFRQ9UKV5 643 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.98■□□□□ 0.15
PTPN9-206ENST00000618819 KIAA1107Q9UPP5 1409 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms