RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 GPR75-ASB3A0A0A6YYF3 556 aa10.49□□□□□ -0.73
GPC6-202ENST00000617456 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
GPC6-202ENST00000617456 TBC1D12O60347 775 aa10.49□□□□□ -0.73
GPC6-202ENST00000617456 RHBDL3P58872 404 aa10.49□□□□□ -0.73
GPC6-202ENST00000617456 MDM2Q00987 491 aaPredicted RBP10.49□□□□□ -0.73
GPC6-202ENST00000617456 MECOMQ03112 1051 aa10.49□□□□□ -0.73
GPC6-202ENST00000617456 RRP1BQ14684 758 aaKnown RBP10.49□□□□□ -0.73
GPC6-202ENST00000617456 OGDHLQ9ULD0 1010 aa10.49□□□□□ -0.73
GPC6-202ENST00000617456 PFASO15067 1338 aa10.49□□□□□ -0.73
GPC6-202ENST00000617456 DDX60LQ5H9U9 1706 aaKnown RBP10.48□□□□□ -0.73
GPC6-202ENST00000617456 MAP4K4O95819 1239 aaPredicted RBP10.48□□□□□ -0.73
GPC6-202ENST00000617456 GNAI2P04899 355 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 TRIM27P14373 513 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
GPC6-202ENST00000617456 CAP2P40123 477 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 MTMR2Q13614 643 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 ZNF384Q8TF68 577 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 P2RX7Q99572 595 aaKnown RBP10.48□□□□□ -0.73
GPC6-202ENST00000617456 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 AS3MTQ9HBK9 375 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 TMOD4Q9NZQ9 345 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 RAI14Q9P0K7 980 aa10.48□□□□□ -0.73
GPC6-202ENST00000617456 A0A1B0GUL7 405 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 SRGAP3O43295 1099 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 LDHCP07864 332 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 GSTO1P78417 241 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 CACNB2Q08289 660 aaPredicted RBP10.47□□□□□ -0.73
GPC6-202ENST00000617456 TFCP2Q12800 502 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 PDE3AQ14432 1141 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 TMEM132AQ24JP5 1023 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 LRRC26Q2I0M4 334 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 ZKSCAN2Q63HK3 967 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 TBC1D9Q6ZT07 1266 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 TEX2Q8IWB9 1127 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 CCAR1Q8IX12 1150 aaKnown RBP10.47□□□□□ -0.73
GPC6-202ENST00000617456 TEX11Q8IYF3 940 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 GPRC5AQ8NFJ5 357 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 YTHDC1Q96MU7 727 aaKnown RBP10.47□□□□□ -0.73
GPC6-202ENST00000617456 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 NEUROD6Q96NK8 337 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 MEIS3Q99687 375 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 COL25A1Q9BXS0 654 aaPredicted RBP10.47□□□□□ -0.73
GPC6-202ENST00000617456 TBC1D2Q9BYX2 928 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 TXNRD2Q9NNW7 524 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 MORF4L1Q9UBU8 362 aa10.47□□□□□ -0.73
GPC6-202ENST00000617456 NAP1L2Q9ULW6 460 aaPredicted RBP10.47□□□□□ -0.73
GPC6-202ENST00000617456 CCND3P30281 292 aaPredicted RBP10.46□□□□□ -0.73
GPC6-202ENST00000617456 MVPQ14764 893 aaKnown RBP10.46□□□□□ -0.73
GPC6-202ENST00000617456 CCL14Q16627 93 aa10.46□□□□□ -0.73
GPC6-202ENST00000617456 SH3D19Q5HYK7 790 aa10.46□□□□□ -0.73
GPC6-202ENST00000617456 GORABQ5T7V8 394 aa10.46□□□□□ -0.73
GPC6-202ENST00000617456 MAP3K21Q5TCX8 1036 aa10.46□□□□□ -0.73
GPC6-202ENST00000617456 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.46□□□□□ -0.73
GPC6-202ENST00000617456 SH3RF3Q8TEJ3 882 aaPredicted RBP10.46□□□□□ -0.73
GPC6-202ENST00000617456 SOCS4Q8WXH5 440 aa10.46□□□□□ -0.73
GPC6-202ENST00000617456 PAGR1Q9BTK6 254 aa10.46□□□□□ -0.73
GPC6-202ENST00000617456 CWC22Q9HCG8 908 aaKnown RBP10.46□□□□□ -0.73
GPC6-202ENST00000617456 GPR108Q9NPR9 543 aa10.46□□□□□ -0.73
GPC6-202ENST00000617456 HMG20BQ9P0W2 317 aa10.46□□□□□ -0.73
GPC6-202ENST00000617456 GDF11O95390 407 aa10.45□□□□□ -0.74
GPC6-202ENST00000617456 COL6A1P12109 1028 aa10.45□□□□□ -0.74
GPC6-202ENST00000617456 HERVK_113P62684 666 aa10.45□□□□□ -0.74
GPC6-202ENST00000617456 SHROOM1Q2M3G4 852 aaPredicted RBP10.45□□□□□ -0.74
GPC6-202ENST00000617456 Q3C1V9 767 aa10.45□□□□□ -0.74
GPC6-202ENST00000617456 TRMT44Q8IYL2 757 aaKnown RBP10.45□□□□□ -0.74
GPC6-202ENST00000617456 SPATA5Q8NB90 893 aa10.45□□□□□ -0.74
GPC6-202ENST00000617456 NSUN4Q96CB9 384 aaKnown RBP10.45□□□□□ -0.74
GPC6-202ENST00000617456 WDR18Q9BV38 432 aa10.45□□□□□ -0.74
GPC6-202ENST00000617456 TRIM34Q9BYJ4 488 aa10.45□□□□□ -0.74
GPC6-202ENST00000617456 PORCNQ9H237 461 aa10.45□□□□□ -0.74
GPC6-202ENST00000617456 LOC285556D6RIA3 1793 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 UNC80Q8N2C7 3258 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 ZBED9Q6R2W3 1325 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 RRP9O43818 475 aaKnown RBP10.44□□□□□ -0.74
GPC6-202ENST00000617456 MS4A1P11836 297 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
GPC6-202ENST00000617456 MAPK4P31152 587 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 RGS2P41220 211 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 BACE1P56817 501 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 ERVK-9P63128 1117 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 ERVK-24P63145 666 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 JAG1P78504 1218 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 LHX8Q68G74 356 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 TMED8Q6PL24 325 aaPredicted RBP10.44□□□□□ -0.74
GPC6-202ENST00000617456 GPR142Q7Z601 462 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 PLEKHH3Q7Z736 793 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 MAPKAPK5Q8IW41 473 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 GUCD1Q96NT3 240 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 LBHD1Q9BQE6 289 aaPredicted RBP10.44□□□□□ -0.74
GPC6-202ENST00000617456 NOL10Q9BSC4 688 aaKnown RBP10.44□□□□□ -0.74
GPC6-202ENST00000617456 LRP2BPQ9P2M1 347 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 PI4KBQ9UBF8 816 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 RBPJLQ9UBG7 517 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 HERC5Q9UII4 1024 aaKnown RBP10.44□□□□□ -0.74
GPC6-202ENST00000617456 NDUFB9Q9Y6M9 179 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.44□□□□□ -0.74
GPC6-202ENST00000617456 PLXNB2O15031 1838 aa10.44□□□□□ -0.74
GPC6-202ENST00000617456 ATAD5Q96QE3 1844 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms