RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 WTAPQ15007 396 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 LINC00301Q8NCQ3 95 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 ZNF397Q8NF99 534 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 ZNF396Q96N95 335 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 TNKSO95271 1327 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 MYH15Q9Y2K3 1946 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 CHRM1P11229 460 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 IARSP41252 1262 aaKnown RBP13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 DIXDC1Q155Q3 683 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 CHD4Q14839 1912 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 MARCKSP29966 332 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 GRAPQ13588 217 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 GRAPLQ8TC17 118 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 ANKRD2Q9GZV1 360 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 DNAJC25Q9H1X3 360 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 KCNJ14Q9UNX9 436 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 PAXBP1Q9Y5B6 917 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 RAD51AP2Q09MP3 1159 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 STK38Q15208 465 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
PCDHGA9-202ENST00000616887 NDUFA8P51970 172 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 DDR1Q08345 913 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 ZNF654Q8IZM8 581 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 NOL10Q9BSC4 688 aaKnown RBP13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 MYH13Q9UKX3 1938 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 SERPINB2P05120 415 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 CYP2C19P33261 490 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 GPSM2P81274 684 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 SEC23AQ15436 765 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 RTN1Q16799 776 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 FAM47AQ5JRC9 791 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 FBXO38Q6PIJ6 1188 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 CBX8Q9HC52 389 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 DCP1AQ9NPI6 582 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 FAM53CQ9NYF3 392 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 MROH7-TTC4A0A0A0MT08 1334 aa13.14□□□□□ -0.31
PCDHGA9-202ENST00000616887 UTRNP46939 3433 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 CDKL5O76039 1030 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 TPD52L1Q16890 204 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 ECM29Q5VYK3 1845 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 UBR3Q6ZT12 1888 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 C11orf57Q6ZUT1 292 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 FAM200AQ8TCP9 573 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 ZNF215Q9UL58 517 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 ERICH2A1L162 156 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 USP17L8P0C7I0 530 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 SART3Q15020 963 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 NBPF11Q86T75 865 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 DZIP1Q86YF9 867 aaKnown RBP13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 DRC7Q8IY82 874 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 ESR2Q92731 530 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
PCDHGA9-202ENST00000616887 DUOX1Q9NRD9 1551 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 BTBD18B2RXH4 712 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 SPTLC2O15270 562 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 GNL2Q13823 731 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 ANO1Q5XXA6 986 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 RPGRQ92834 1020 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 BRIP1Q9BX63 1249 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 POLR3EQ9NVU0 708 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 RSPH14Q9UHP6 348 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 SEMA3EO15041 775 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 IFNAR1P17181 557 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 NR5A1Q13285 461 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 SYNE3Q6ZMZ3 975 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 BRAPQ7Z569 592 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-202ENST00000616887 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 UFL1O94874 794 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 ELF2Q15723 593 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 AXDND1Q5T1B0 1012 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 CEP135Q66GS9 1140 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms