RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 AGXT2Q9BYV1 514 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 PXDNQ92626 1479 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 SLIT1O75093 1534 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 AKAP12Q02952 1782 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 ERCC3P19447 782 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 SSRP1Q08945 709 aaKnown RBP14.91□□□□□ -0.02
MSH6-214ENST00000616033 FCHSD1Q86WN1 690 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 OXER1Q8TDS5 423 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 PCMTD1Q96MG8 357 aaPredicted RBP14.91□□□□□ -0.02
MSH6-214ENST00000616033 SLC12A7Q9Y666 1083 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 RGPD1P0DJD0 1748 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 A0A0G2JS52 829 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 KCTD19Q17RG1 926 aaPredicted RBP14.91□□□□□ -0.02
MSH6-214ENST00000616033 APOA5Q6Q788 366 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 HELBQ8NG08 1087 aaPredicted RBP14.91□□□□□ -0.02
MSH6-214ENST00000616033 CHP1Q99653 195 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 CSRNP2Q9H175 543 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 ATG3Q9NT62 314 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 FAM43BQ6ZT52 329 aaPredicted RBP14.91□□□□□ -0.02
MSH6-214ENST00000616033 CCDC148Q8NFR7 591 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 FAM107BQ9H098 131 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 SLC24A3Q9HC58 644 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 HPSEQ9Y251 543 aa14.91□□□□□ -0.02
MSH6-214ENST00000616033 RNF225M0QZC1 329 aaPredicted RBP14.9□□□□□ -0.02
MSH6-214ENST00000616033 RANBP6O60518 1105 aaKnown RBP14.9□□□□□ -0.02
MSH6-214ENST00000616033 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
MSH6-214ENST00000616033 KRT9P35527 623 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 MAGEA9P43362 315 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 TBX2Q13207 712 aaPredicted RBP14.9□□□□□ -0.02
MSH6-214ENST00000616033 DNAJC5Q9H3Z4 198 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 SYNRGQ9UMZ2 1314 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 PRDM1O75626 825 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 FBXW10Q5XX13 1052 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 SYNE4Q8N205 404 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 RASSF8Q8NHQ8 419 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 PLIN2Q99541 437 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 ACBD3Q9H3P7 528 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 DACH1Q9UI36 760 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 MYO6Q9UM54 1294 aa14.9□□□□□ -0.02
MSH6-214ENST00000616033 FRMD3A2A2Y4 597 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 H0YHG0 523 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 EYA2O00167 538 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 GUCY2CP25092 1073 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 FAM89AQ96GI7 184 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 JADE2Q9NQC1 790 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 JCADQ9P266 1359 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 MACROD2A1Z1Q3 448 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 SNAP23O00161 211 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 ZNF185O15231 689 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 RRAGBQ5VZM2 374 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 KCNH5Q8NCM2 988 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 CEP83Q9Y592 693 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 FOXP2O15409 715 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 CDKL5O76039 1030 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 IL15P40933 162 aaPredicted RBP14.89□□□□□ -0.03
MSH6-214ENST00000616033 NR1I3Q14994 352 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 NOSTRINQ8IVI9 506 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 MLKLQ8NB16 471 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 MAP3K14Q99558 947 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 CXorf56Q9H5V9 222 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 MTMR7Q9Y216 660 aa14.89□□□□□ -0.03
MSH6-214ENST00000616033 UTYO14607 1347 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 GGCXP38435 758 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 ZNF174Q15697 407 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 SUFUQ9UMX1 484 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 UBN2Q6ZU65 1347 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 ZEB2O60315 1214 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 PPP6R2O75170 966 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 SNRPA1P09661 255 aaKnown RBP14.88□□□□□ -0.03
MSH6-214ENST00000616033 GPTP24298 496 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 KIAA1328Q86T90 577 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 CENPHQ9H3R5 247 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 GNL3LQ9NVN8 582 aaKnown RBP14.88□□□□□ -0.03
MSH6-214ENST00000616033 TMEM94Q12767 1356 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 CCDC172P0C7W6 258 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 ATP2B2Q01814 1243 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 ENOX1Q8TC92 643 aaKnown RBP14.88□□□□□ -0.03
MSH6-214ENST00000616033 MMS19Q96T76 1030 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 STRN4Q9NRL3 753 aa14.88□□□□□ -0.03
MSH6-214ENST00000616033 ZPR1O75312 459 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 GYPCP04921 128 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 TOB1P50616 345 aaPredicted RBP14.87□□□□□ -0.03
MSH6-214ENST00000616033 CABP4P57796 275 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 ERVK-24P63145 666 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 SF3A3Q12874 501 aaKnown RBP eCLIP14.87□□□□□ -0.03
MSH6-214ENST00000616033 METTL24Q5JXM2 366 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 CCDC122Q5T0U0 273 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 KCTD16Q68DU8 428 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 FAM71BQ8TC56 605 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 PPM1EQ8WY54 764 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 CWC25Q9NXE8 425 aaPredicted RBP14.87□□□□□ -0.03
MSH6-214ENST00000616033 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 ZMYM6O95789 1325 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 MFAP3LO75121 409 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 ATP1A2P50993 1020 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 UBXN1Q04323 297 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 PPARAQ07869 468 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 STIM1Q13586 685 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 GBP3Q9H0R5 595 aa14.87□□□□□ -0.03
MSH6-214ENST00000616033 SLC52A2Q9HAB3 445 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms