RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 TDRD7Q8NHU6 1098 aaKnown RBP12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 FAM117AQ9C073 453 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 KCNF1Q9H3M0 494 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 ECHDC1Q9NTX5 307 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 PTPN22Q9Y2R2 807 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 IRS2Q9Y4H2 1338 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 SMTNL1A8MU46 457 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 SRGAP3O43295 1099 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 FKBP1AP62942 108 aaKnown RBP12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 RASA3Q14644 834 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 NOL8Q76FK4 1167 aaKnown RBP12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 CLASRPQ8N2M8 674 aaKnown RBP12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 RETREG2Q8NC44 543 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 CD99L2Q8TCZ2 262 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 ZNF830Q96NB3 372 aaPredicted RBP12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 JAG2Q9Y219 1238 aa12.93□□□□□ -0.34
RABGAP1-213ENST00000616002 LAMB1P07942 1786 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 FIBPO43427 364 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 USP2O75604 605 aaPredicted RBP12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 SP3Q02447 781 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 TNFAIP1Q13829 316 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 E2F4Q16254 413 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 TAF3Q5VWG9 929 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 PLA2G4DQ86XP0 818 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 KIAA0100Q14667 2235 aaKnown RBP12.92□□□□□ -0.34
RABGAP1-213ENST00000616002 TRIM66O15016 1216 aa12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 AP5Z1O43299 807 aa12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 GJA5P36382 358 aa12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 TYRO3Q06418 890 aa12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 DHX8Q14562 1220 aaKnown RBP12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 TAF7LQ5H9L4 462 aa12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 LARP1BQ659C4 914 aaKnown RBP12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 SARM1Q6SZW1 724 aa12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 CCDC97Q96F63 343 aaPredicted RBP12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 OGFRQ9NZT2 677 aa12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 MRVI1Q9Y6F6 885 aa12.91□□□□□ -0.34
RABGAP1-213ENST00000616002 CTAGE5O15320 804 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 FOXO4P98177 505 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 ATL3Q6DD88 541 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 LDHAL6AQ6ZMR3 332 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 CCDC83Q8IWF9 413 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 OPTNQ96CV9 577 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 PTPN18Q99952 460 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 ELP3Q9H9T3 547 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 CNNM1Q9NRU3 951 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 SERPINA10Q9UK55 444 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 PYCARDQ9ULZ3 195 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 RFX7Q2KHR2 1363 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 UTYO14607 1347 aa12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
RABGAP1-213ENST00000616002 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 KRT32Q14532 448 aa12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 ARHGEF6Q15052 776 aa12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 ME3Q16798 604 aa12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 TTC6Q86TZ1 520 aa12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 CGNQ9P2M7 1197 aaKnown RBP12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 ZNF70Q9UC06 446 aaPredicted RBP12.9□□□□□ -0.35
RABGAP1-213ENST00000616002 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 HTTP42858 3142 aa12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 EN2P19622 333 aaPredicted RBP12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 ZNF75DP51815 510 aa12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 PTH1RQ03431 593 aa12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 GABPB1Q06547 395 aaPredicted RBP12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 IRF5Q13568 498 aa12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 FOXD4L6Q3SYB3 417 aaPredicted RBP12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 FOXD4L3Q6VB84 417 aaPredicted RBP12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 ZNF594Q96JF6 807 aaPredicted RBP12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 ZSCAN16Q9H4T2 348 aaPredicted RBP12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 TDRD3Q9H7E2 651 aaKnown RBP12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 TTF2Q9UNY4 1162 aaKnown RBP12.89□□□□□ -0.35
RABGAP1-213ENST00000616002 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 MKI67P46013 3256 aaKnown RBP12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 LARGE1O95461 756 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 ST3GAL1Q11201 340 aa12.88□□□□□ -0.35
RABGAP1-213ENST00000616002 TAF1CQ15572 869 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms