RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 MMRN2Q9H8L6 949 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 NCOA5Q9HCD5 579 aaKnown RBP16.51■□□□□ 0.23
SNPH-203ENST00000614659 BCCIPQ9P287 314 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNPH-203ENST00000614659 ZMYM6O95789 1325 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 RPL13P26373 211 aaKnown RBP16.51■□□□□ 0.23
SNPH-203ENST00000614659 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 IGSF22Q8N9C0 903 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 ZSWIM4Q9H7M6 989 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 A0A0D9SFI3 127 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 VWA3AA6NCI4 1184 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 ERVV-1B6SEH8 477 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
SNPH-203ENST00000614659 PCP11498 1178 aaKnown RBP16.51■□□□□ 0.23
SNPH-203ENST00000614659 CDC25BP30305 580 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 MNAT1P51948 309 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 MCTP2Q6DN12 878 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 TMTC1Q8IUR5 882 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 FERMT1Q9BQL6 677 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 XDHP47989 1333 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 ZNF532Q9HCE3 1301 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 RXRAP19793 462 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 POSTNQ15063 836 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 HOOK3Q86VS8 718 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 CTNND2Q9UQB3 1225 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 ZAP70P43403 619 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 SLC27A3Q5K4L6 730 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 TRIML1Q8N9V2 468 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 ATG3Q9NT62 314 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 ARPP21Q9UBL0 812 aaPredicted RBP16.5■□□□□ 0.23
SNPH-203ENST00000614659 ADRA2BP18089 450 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 DNA2P51530 1060 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 PAK1Q13153 545 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
SNPH-203ENST00000614659 STX17P56962 302 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 PPP2R3AQ06190 1150 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 ZNF174Q15697 407 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 AKNAD1Q5T1N1 836 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 NAPGQ99747 312 aaPredicted RBP16.5■□□□□ 0.23
SNPH-203ENST00000614659 TPCN1Q9ULQ1 816 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 NOD1Q9Y239 953 aa16.5■□□□□ 0.23
SNPH-203ENST00000614659 MAP3K9P80192 1104 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 MRFAP1L1Q96HT8 127 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 JAK2O60674 1132 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 HSP90AA4PQ58FG1 418 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 SPC25Q9HBM1 224 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 E9PCH4 1651 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 NSRP1Q9H0G5 558 aaKnown RBP16.49■□□□□ 0.23
SNPH-203ENST00000614659 A0A1W2PQ27 194 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 A0A1W2PQ64 194 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 A0A1W2PQD8 194 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 SERPINB2P05120 415 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 TNNC1P63316 161 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 POLA2Q14181 598 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 FCHSD1Q86WN1 690 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 IMPG2Q9BZV3 1241 aa16.49■□□□□ 0.23
SNPH-203ENST00000614659 HS2ST1Q7LGA3 356 aa16.48■□□□□ 0.23
SNPH-203ENST00000614659 MED23Q9ULK4 1368 aa16.48■□□□□ 0.23
SNPH-203ENST00000614659 SAP30BPQ9UHR5 308 aaKnown RBP16.48■□□□□ 0.23
SNPH-203ENST00000614659 FAM13AO94988 1023 aa16.48■□□□□ 0.23
SNPH-203ENST00000614659 CMA1P23946 247 aa16.48■□□□□ 0.23
SNPH-203ENST00000614659 PRPF4BQ13523 1007 aaKnown RBP16.48■□□□□ 0.23
SNPH-203ENST00000614659 KARSQ15046 597 aaKnown RBP16.48■□□□□ 0.23
SNPH-203ENST00000614659 DALRD3Q5D0E6 543 aaKnown RBP16.48■□□□□ 0.23
SNPH-203ENST00000614659 GUCA1BQ9UMX6 200 aa16.48■□□□□ 0.23
SNPH-203ENST00000614659 RIOK3O14730 519 aaKnown RBP16.47■□□□□ 0.23
SNPH-203ENST00000614659 UBE4AQ14139 1066 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 CTNNBL1Q8WYA6 563 aaPredicted RBP16.47■□□□□ 0.23
SNPH-203ENST00000614659 LZTFL1Q9NQ48 299 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 ALKQ9UM73 1620 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 POLR2DO15514 142 aaKnown RBP16.47■□□□□ 0.23
SNPH-203ENST00000614659 MFSD14BQ5SR56 506 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 ARFGAP2Q8N6H7 521 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 KIAA1468Q9P260 1216 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 A6NNZ2 444 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 EVCP57679 992 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 TUBB8Q3ZCM7 444 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 CHURC1Q8WUH1 139 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 ZKSCAN3Q9BRR0 538 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 PNPLA6Q8IY17 1366 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
SNPH-203ENST00000614659 UBE3CQ15386 1083 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 HAUS3Q68CZ6 603 aa16.47■□□□□ 0.23
SNPH-203ENST00000614659 VAV2P52735 878 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 SMCR8Q8TEV9 937 aaPredicted RBP16.46■□□□□ 0.23
SNPH-203ENST00000614659 USP40Q9NVE5 1235 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 V9GY48 417 aaPredicted RBP16.46■□□□□ 0.23
SNPH-203ENST00000614659 GABPB1Q06547 395 aaPredicted RBP16.46■□□□□ 0.23
SNPH-203ENST00000614659 LRRC45Q96CN5 670 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 NOC4LQ9BVI4 516 aaKnown RBP16.46■□□□□ 0.23
SNPH-203ENST00000614659 ATP10DQ9P241 1426 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 BACH1O14867 736 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 TAF5LO75529 589 aa16.46■□□□□ 0.23
SNPH-203ENST00000614659 GTF2IP78347 998 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms