RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 PRKAR2AP13861 404 aaKnown RBP28.88■■■□□ 2.21
MMP28-203ENST00000612672 GORABQ5T7V8 394 aa28.88■■■□□ 2.21
MMP28-203ENST00000612672 MAPKAPK5Q8IW41 473 aa28.88■■■□□ 2.21
MMP28-203ENST00000612672 FLT1P17948 1338 aa28.88■■■□□ 2.21
MMP28-203ENST00000612672 HERVK_113P62684 666 aa28.87■■■□□ 2.21
MMP28-203ENST00000612672 PORCNQ9H237 461 aa28.87■■■□□ 2.21
MMP28-203ENST00000612672 AS3MTQ9HBK9 375 aa28.87■■■□□ 2.21
MMP28-203ENST00000612672 MYH1P12882 1939 aa28.86■■■□□ 2.21
MMP28-203ENST00000612672 HOXA7P31268 230 aaPredicted RBP28.86■■■□□ 2.21
MMP28-203ENST00000612672 IRX3P78415 501 aaPredicted RBP28.86■■■□□ 2.21
MMP28-203ENST00000612672 Q3C1V9 767 aa28.86■■■□□ 2.21
MMP28-203ENST00000612672 METTL16Q86W50 562 aaKnown RBP28.86■■■□□ 2.21
MMP28-203ENST00000612672 TGFBRAP1Q8WUH2 860 aa28.86■■■□□ 2.21
MMP28-203ENST00000612672 USP6NLQ92738 828 aa28.86■■■□□ 2.21
MMP28-203ENST00000612672 LRP2BPQ9P2M1 347 aa28.86■■■□□ 2.21
MMP28-203ENST00000612672 PI4KBQ9UBF8 816 aa28.86■■■□□ 2.21
MMP28-203ENST00000612672 RBPJLQ9UBG7 517 aa28.86■■■□□ 2.21
MMP28-203ENST00000612672 CCL14Q16627 93 aa28.85■■■□□ 2.21
MMP28-203ENST00000612672 CACNB2Q08289 660 aaPredicted RBP28.84■■■□□ 2.21
MMP28-203ENST00000612672 ARHGAP45Q92619 1136 aa28.84■■■□□ 2.21
MMP28-203ENST00000612672 PALD1Q9ULE6 856 aa28.84■■■□□ 2.21
MMP28-203ENST00000612672 ASNSP08243 561 aa28.83■■■□□ 2.21
MMP28-203ENST00000612672 COL6A1P12109 1028 aa28.83■■■□□ 2.21
MMP28-203ENST00000612672 TRIM27P14373 513 aa28.83■■■□□ 2.21
MMP28-203ENST00000612672 CCND3P30281 292 aaPredicted RBP28.83■■■□□ 2.21
MMP28-203ENST00000612672 NAA16Q6N069 864 aaPredicted RBP28.83■■■□□ 2.21
MMP28-203ENST00000612672 DBNDD2Q9BQY9 259 aa28.83■■■□□ 2.21
MMP28-203ENST00000612672 ZBTB21Q9ULJ3 1066 aa28.83■■■□□ 2.21
MMP28-203ENST00000612672 VCANP13611 3396 aa28.83■■■□□ 2.21
MMP28-203ENST00000612672 CYP2E1P05181 493 aaPredicted RBP28.82■■■□□ 2.2
MMP28-203ENST00000612672 UQCRFS1P1P0C7P4 283 aa28.82■■■□□ 2.2
MMP28-203ENST00000612672 PPP4CP60510 307 aa28.82■■■□□ 2.2
MMP28-203ENST00000612672 LHX8Q68G74 356 aa28.82■■■□□ 2.2
MMP28-203ENST00000612672 DEFB123Q8N688 67 aa28.82■■■□□ 2.2
MMP28-203ENST00000612672 GPRC5AQ8NFJ5 357 aa28.82■■■□□ 2.2
MMP28-203ENST00000612672 NUDT12Q9BQG2 462 aa28.82■■■□□ 2.2
MMP28-203ENST00000612672 DHX36Q9H2U1 1008 aaKnown RBP28.82■■■□□ 2.2
MMP28-203ENST00000612672 EMILIN3Q9NT22 766 aa28.82■■■□□ 2.2
MMP28-203ENST00000612672 TMOD4Q9NZQ9 345 aa28.82■■■□□ 2.2
MMP28-203ENST00000612672 SAP30BPQ9UHR5 308 aaKnown RBP28.82■■■□□ 2.2
MMP28-203ENST00000612672 XRCC5P13010 732 aaKnown RBP28.81■■■□□ 2.2
MMP28-203ENST00000612672 ERVK-9P63128 1117 aa28.81■■■□□ 2.2
MMP28-203ENST00000612672 ERVK-24P63145 666 aa28.81■■■□□ 2.2
MMP28-203ENST00000612672 LRIT3Q3SXY7 679 aa28.81■■■□□ 2.2
MMP28-203ENST00000612672 MORN1Q5T089 497 aa28.81■■■□□ 2.2
MMP28-203ENST00000612672 USP17L10C9JJH3 530 aa28.8■■■□□ 2.2
MMP28-203ENST00000612672 GNAI2P04899 355 aa28.8■■■□□ 2.2
MMP28-203ENST00000612672 DYNLL1P63167 89 aaKnown RBP28.8■■■□□ 2.2
MMP28-203ENST00000612672 G3BP1Q13283 466 aaKnown RBP eCLIP28.8■■■□□ 2.2
MMP28-203ENST00000612672 LRRC26Q2I0M4 334 aa28.8■■■□□ 2.2
MMP28-203ENST00000612672 GPR142Q7Z601 462 aa28.8■■■□□ 2.2
MMP28-203ENST00000612672 TDHQ8IZJ6 230 aa28.8■■■□□ 2.2
MMP28-203ENST00000612672 SOCS4Q8WXH5 440 aa28.8■■■□□ 2.2
MMP28-203ENST00000612672 PAGR1Q9BTK6 254 aa28.8■■■□□ 2.2
MMP28-203ENST00000612672 PIH1D3Q9NQM4 214 aaKnown RBP28.8■■■□□ 2.2
MMP28-203ENST00000612672 CNMDO75829 334 aa28.79■■■□□ 2.2
MMP28-203ENST00000612672 ZKSCAN1P17029 563 aaPredicted RBP28.79■■■□□ 2.2
MMP28-203ENST00000612672 GPR153Q6NV75 609 aa28.79■■■□□ 2.2
MMP28-203ENST00000612672 CDH23Q9H251 3354 aa28.78■■■□□ 2.2
MMP28-203ENST00000612672 TNNI3KQ59H18 835 aa28.78■■■□□ 2.2
MMP28-203ENST00000612672 NOL10Q9BSC4 688 aaKnown RBP28.78■■■□□ 2.2
MMP28-203ENST00000612672 FPGT-TNNI3KV9GXZ4 949 aa28.78■■■□□ 2.2
MMP28-203ENST00000612672 C19orf81C9J6K1 198 aa28.77■■■□□ 2.2
MMP28-203ENST00000612672 BAG3O95817 575 aa28.77■■■□□ 2.2
MMP28-203ENST00000612672 MAPK4P31152 587 aa28.77■■■□□ 2.2
MMP28-203ENST00000612672 TTC39AQ5SRH9 613 aa28.77■■■□□ 2.2
MMP28-203ENST00000612672 CRACR2BQ8N4Y2 399 aaPredicted RBP28.77■■■□□ 2.2
MMP28-203ENST00000612672 FLRT1Q9NZU1 646 aa28.77■■■□□ 2.2
MMP28-203ENST00000612672 BCAR3O75815 825 aa28.76■■■□□ 2.19
MMP28-203ENST00000612672 ZAP70P43403 619 aa28.76■■■□□ 2.19
MMP28-203ENST00000612672 POLA2Q14181 598 aa28.76■■■□□ 2.19
MMP28-203ENST00000612672 FOXP4Q8IVH2 680 aaPredicted RBP28.76■■■□□ 2.19
MMP28-203ENST00000612672 CLUAP1Q96AJ1 413 aa28.76■■■□□ 2.19
MMP28-203ENST00000612672 UBE2OQ9C0C9 1292 aaKnown RBP28.76■■■□□ 2.19
MMP28-203ENST00000612672 MTMR10Q9NXD2 777 aa28.76■■■□□ 2.19
MMP28-203ENST00000612672 TLR7Q9NYK1 1049 aaKnown RBP28.76■■■□□ 2.19
MMP28-203ENST00000612672 SPTBN5Q9NRC6 3674 aaKnown RBP28.76■■■□□ 2.19
MMP28-203ENST00000612672 PLCG2P16885 1265 aa28.75■■■□□ 2.19
MMP28-203ENST00000612672 PDE3AQ14432 1141 aa28.75■■■□□ 2.19
MMP28-203ENST00000612672 PLEKHH3Q7Z736 793 aa28.75■■■□□ 2.19
MMP28-203ENST00000612672 NDUFB9Q9Y6M9 179 aa28.75■■■□□ 2.19
MMP28-203ENST00000612672 LTBP2Q14767 1821 aa28.75■■■□□ 2.19
MMP28-203ENST00000612672 GH2P01242 217 aa28.74■■■□□ 2.19
MMP28-203ENST00000612672 RGS2P41220 211 aa28.74■■■□□ 2.19
MMP28-203ENST00000612672 ZYXQ15942 572 aaKnown RBP28.74■■■□□ 2.19
MMP28-203ENST00000612672 ATF7IPQ6VMQ6 1270 aa28.74■■■□□ 2.19
MMP28-203ENST00000612672 APBA2Q99767 749 aa28.74■■■□□ 2.19
MMP28-203ENST00000612672 GPR108Q9NPR9 543 aa28.74■■■□□ 2.19
MMP28-203ENST00000612672 MDM2Q00987 491 aaPredicted RBP28.73■■■□□ 2.19
MMP28-203ENST00000612672 STXBP5LQ9Y2K9 1186 aa28.73■■■□□ 2.19
MMP28-203ENST00000612672 PRUNE2Q8WUY3 3088 aa28.72■■■□□ 2.19
MMP28-203ENST00000612672 USP17L2Q6R6M4 530 aa28.72■■■□□ 2.19
MMP28-203ENST00000612672 TMEM57Q8N5G2 664 aa28.72■■■□□ 2.19
MMP28-203ENST00000612672 FRAT1Q92837 279 aaPredicted RBP28.72■■■□□ 2.19
MMP28-203ENST00000612672 TRIM34Q9BYJ4 488 aa28.72■■■□□ 2.19
MMP28-203ENST00000612672 GINM1Q9NU53 330 aa28.72■■■□□ 2.19
MMP28-203ENST00000612672 DBNLQ9UJU6 430 aaKnown RBP28.72■■■□□ 2.19
MMP28-203ENST00000612672 TRMT44Q8IYL2 757 aaKnown RBP28.71■■■□□ 2.19
MMP28-203ENST00000612672 MIGA1Q8NAN2 632 aa28.71■■■□□ 2.19
MMP28-203ENST00000612672 C12orf42Q96LP6 360 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms