RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 FAM227BQ96M60 508 aa10.51□□□□□ -0.73
SMAD4-217ENST00000611848 PICK1Q9NRD5 415 aa10.51□□□□□ -0.73
SMAD4-217ENST00000611848 DIAPH3Q9NSV4 1193 aa10.51□□□□□ -0.73
SMAD4-217ENST00000611848 GINM1Q9NU53 330 aa10.51□□□□□ -0.73
SMAD4-217ENST00000611848 ARPP21Q9UBL0 812 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-217ENST00000611848 DOCK1Q14185 1865 aa10.51□□□□□ -0.73
SMAD4-217ENST00000611848 MYH8P13535 1937 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 MANSC4A6NHS7 340 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-217ENST00000611848 FAM196BA6NMK8 535 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 CAP2P40123 477 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 INHBEP58166 350 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 GABPAQ06546 454 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 PPIL2Q13356 520 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 SLC4A8Q2Y0W8 1093 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 TATDN1Q6P1N9 297 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 CTR9Q6PD62 1173 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 CASC1Q6TDU7 716 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 IFNL3Q8IZI9 196 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 ZIC5Q96T25 663 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 USP26Q9BXU7 913 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 SLKQ9H2G2 1235 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-217ENST00000611848 DNAJC18Q9H819 358 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 SWAP70Q9UH65 585 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 ATAD5Q96QE3 1844 aa10.5□□□□□ -0.73
SMAD4-217ENST00000611848 LAMB1P07942 1786 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 PCNTO95613 3336 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 DDIT3P35638 169 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 GJA5P36382 358 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 TDO2P48775 406 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 SREBF2Q12772 1141 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 MKRN3Q13064 507 aaKnown RBP10.49□□□□□ -0.73
SMAD4-217ENST00000611848 POTEHQ6S545 545 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 CWC27Q6UX04 472 aaKnown RBP10.49□□□□□ -0.73
SMAD4-217ENST00000611848 CCDC129Q6ZRS4 1044 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 OTUD5Q96G74 571 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 BEGAINQ9BUH8 593 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 WBP1LQ9NX94 342 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 CCDC171Q6TFL3 1326 aa10.49□□□□□ -0.73
SMAD4-217ENST00000611848 IRF6O14896 467 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 ASNSP08243 561 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 CYP2D6P10635 497 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 PTPRAP18433 802 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 TM4SF4P48230 202 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 GTF2A2P52657 109 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 ALX1Q15699 326 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 CERKLQ49MI3 558 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-217ENST00000611848 RUFY2Q8WXA3 655 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 BBXQ8WY36 941 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-217ENST00000611848 NAPBQ9H115 298 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 EPB41L4AQ9HCS5 686 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-217ENST00000611848 CHMP5Q9NZZ3 219 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 PHIPQ8WWQ0 1821 aa10.48□□□□□ -0.73
SMAD4-217ENST00000611848 TESPA1A2RU30 521 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-217ENST00000611848 CXCL11O14625 94 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 HSPD1P10809 573 aaKnown RBP10.47□□□□□ -0.73
SMAD4-217ENST00000611848 SHMT1P34896 483 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 SNAPC2Q13487 334 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 RRP1BQ14684 758 aaKnown RBP10.47□□□□□ -0.73
SMAD4-217ENST00000611848 C16orf86Q6ZW13 317 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 ZNF589Q86UQ0 364 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-217ENST00000611848 CABP5Q9NP86 173 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 KCNH4Q9UQ05 1017 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 ZHX2Q9Y6X8 837 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 RAD50Q92878 1312 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 CYP2D7A0A087X1C5 515 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 USP17L5A8MUK1 530 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 MINDY4BA8MYZ0 360 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 CA12O43570 354 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 ABCB7O75027 752 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 GDF11O95390 407 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 SLC3A2P08195 630 aaKnown RBP10.47□□□□□ -0.73
SMAD4-217ENST00000611848 PRKCSHP14314 528 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-217ENST00000611848 CHMLP26374 656 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 CDK8P49336 464 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 RABEP1Q15276 862 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 OTUD7BQ6GQQ9 843 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 DYNLL2Q96FJ2 89 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 AS3MTQ9HBK9 375 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 ZNF287Q9HBT7 754 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 AFG3L2Q9Y4W6 797 aa10.47□□□□□ -0.73
SMAD4-217ENST00000611848 ZMYM6O95789 1325 aa10.46□□□□□ -0.73
SMAD4-217ENST00000611848 ROBO3Q96MS0 1386 aa10.46□□□□□ -0.73
SMAD4-217ENST00000611848 PTPRFP10586 1907 aa10.46□□□□□ -0.73
SMAD4-217ENST00000611848 FOXP2O15409 715 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 REC8O95072 547 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 ALDH1A1P00352 501 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 FGAP02671 866 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 HSPA1AP0DMV8 641 aaKnown RBP10.46□□□□□ -0.74
SMAD4-217ENST00000611848 HSPA1BP0DMV9 641 aaKnown RBP10.46□□□□□ -0.74
SMAD4-217ENST00000611848 CETPP11597 493 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 EVX2Q03828 476 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 ABCB5Q2M3G0 1257 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 VPS53Q5VIR6 699 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 CCDC17Q96LX7 622 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 SAGE1Q9NXZ1 904 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 ZBTB21Q9ULJ3 1066 aa10.46□□□□□ -0.74
SMAD4-217ENST00000611848 CCL15-CCL14A0A0B4J2E2 113 aa10.45□□□□□ -0.74
SMAD4-217ENST00000611848 GH2P01242 217 aa10.45□□□□□ -0.74
SMAD4-217ENST00000611848 PPARAQ07869 468 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms