RNA–Protein interactions for RNA: ENST00000611817.4

SPTBN2-210, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

TSL 2 BASIC

Gene SPTBN2, Length 2,890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-210ENST00000611817 HMGB1P09429 215 aaKnown RBP15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 PHKA1P46020 1223 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 KCNQ4P56696 695 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 CCDC12Q8WUD4 166 aaPredicted RBP15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 SEC31BQ9NQW1 1179 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 RTEL1Q9NZ71 1219 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 NIP7Q9Y221 180 aaKnown RBP eCLIP15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 COL24A1Q17RW2 1714 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 FGFR2P21802 821 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 STK38Q15208 465 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 LPIN2Q92539 896 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 BAG1Q99933 345 aaPredicted RBP15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 ARID4AP29374 1257 aaPredicted RBP15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 CCT2P78371 535 aaKnown RBP15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 E2F4Q16254 413 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 WWC2Q6AWC2 1192 aa15.3■□□□□ 0.04
SPTBN2-210ENST00000611817 ZNF202O95125 648 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 USP5P45974 858 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 EXOSC10Q01780 885 aaKnown RBP15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 KARSQ15046 597 aaKnown RBP15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 SRGAP1Q7Z6B7 1085 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 LINC00301Q8NCQ3 95 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 CERKQ8TCT0 537 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 APPBP2Q92624 585 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 PNKPQ96T60 521 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 PLEKHA4Q9H4M7 779 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 DOCK2Q92608 1830 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 FGAP02671 866 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 CNNM3Q8NE01 707 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 NCOA5Q9HCD5 579 aaKnown RBP15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 GPHNQ9NQX3 736 aaPredicted RBP15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 PUF60Q9UHX1 559 aaKnown RBP15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 CLIC4Q9Y696 253 aa15.29■□□□□ 0.04
SPTBN2-210ENST00000611817 ATRNO75882 1429 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 GPAA1O43292 621 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 CUTAO60888 179 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 ERLIN1O75477 346 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 RPS6KA4O75676 772 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 IDH1O75874 414 aaKnown RBP15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 MYL5Q02045 173 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 MSL3Q8N5Y2 521 aaKnown RBP15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.046e-7■■■■■ 31.8
SPTBN2-210ENST00000611817 ABCB6Q9NP58 842 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 PIH1D3Q9NQM4 214 aaKnown RBP15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 RAB21Q9UL25 225 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 L1RE1Q9UN81 338 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 A0A1B0GUL6 1792 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 PHACTR2O75167 634 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 CPP00450 1065 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 SLC9C2Q5TAH2 1124 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 SMIM5Q71RC9 77 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 EFCAB13Q8IY85 973 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 PDILTQ8N807 584 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 CCDC102AQ96A19 550 aa15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 GJD4Q96KN9 370 aaPredicted RBP15.28■□□□□ 0.04
SPTBN2-210ENST00000611817 HSP90B2PQ58FF3 399 aa15.27■□□□□ 0.04
SPTBN2-210ENST00000611817 MMS22LQ6ZRQ5 1243 aa15.27■□□□□ 0.04
SPTBN2-210ENST00000611817 FAM71BQ8TC56 605 aa15.27■□□□□ 0.04
SPTBN2-210ENST00000611817 KCNG4Q8TDN1 519 aa15.27■□□□□ 0.04
SPTBN2-210ENST00000611817 DESI2Q9BSY9 194 aa15.27■□□□□ 0.04
SPTBN2-210ENST00000611817 MYO5AQ9Y4I1 1855 aaKnown RBP15.27■□□□□ 0.04
SPTBN2-210ENST00000611817 POTEB2H3BUK9 544 aa15.27■□□□□ 0.03
SPTBN2-210ENST00000611817 SF3B3Q15393 1217 aaKnown RBP15.27■□□□□ 0.03
SPTBN2-210ENST00000611817 SLC10A5Q5PT55 438 aa15.27■□□□□ 0.03
SPTBN2-210ENST00000611817 MCTP2Q6DN12 878 aa15.27■□□□□ 0.03
SPTBN2-210ENST00000611817 INTS13Q9NVM9 706 aa15.27■□□□□ 0.03
SPTBN2-210ENST00000611817 SALL1Q9NSC2 1324 aa15.27■□□□□ 0.03
SPTBN2-210ENST00000611817 STX10O60499 249 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 WDHD1O75717 1129 aaPredicted RBP15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 SLC5A1P13866 664 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 IGHMBP2P38935 993 aaKnown RBP15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 CCDC91Q7Z6B0 441 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 MSANTD4Q8NCY6 345 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 IRX2Q9BZI1 471 aaPredicted RBP15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 NARFQ9UHQ1 456 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 SPTLC2O15270 562 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 TADA2BQ86TJ2 420 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 CARMIL3Q8ND23 1372 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 PFKFB1P16118 471 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 ADD2P35612 726 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 CASP8Q14790 479 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 IMMTQ16891 758 aaKnown RBP15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 PTF1AQ7RTS3 328 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 CDC5LQ99459 802 aaKnown RBP15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 MRPL44Q9H9J2 332 aaKnown RBP15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
SPTBN2-210ENST00000611817 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
SPTBN2-210ENST00000611817 ADKP55263 362 aaKnown RBP15.25■□□□□ 0.03
SPTBN2-210ENST00000611817 TBX2Q13207 712 aaPredicted RBP15.25■□□□□ 0.03
SPTBN2-210ENST00000611817 FBXL16Q8N461 479 aa15.25■□□□□ 0.03
SPTBN2-210ENST00000611817 CEP112Q8N8E3 955 aa15.25■□□□□ 0.03
SPTBN2-210ENST00000611817 AGXT2Q9BYV1 514 aa15.25■□□□□ 0.03
SPTBN2-210ENST00000611817 NYXQ9GZU5 481 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms