RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 RPGRQ92834 1020 aaKnown RBP9.85□□□□□ -0.83
LIG4-204ENST00000611712 ZBTB9Q96C00 473 aa9.85□□□□□ -0.83
LIG4-204ENST00000611712 OVOS2A0A0G2JMS6 1433 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 MYO1BO43795 1136 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 CDC27P30260 824 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 FAM193AP78312 1265 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 CNGA4Q8IV77 575 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 GRAMD1CQ8IYS0 662 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 CALML4Q96GE6 196 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 ZSCAN10Q96SZ4 725 aaPredicted RBP9.84□□□□□ -0.83
LIG4-204ENST00000611712 RIPOR2Q9Y4F9 1068 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 CTAGE9A4FU28 777 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 USP27XA6NNY8 438 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 NAPAP54920 295 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 AMPD3Q01432 767 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 MCM6Q14566 821 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 NAA30Q147X3 362 aaPredicted RBP9.84□□□□□ -0.83
LIG4-204ENST00000611712 FERMT2Q96AC1 680 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 EXOC1Q9NV70 894 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 KDM6AO15550 1401 aaPredicted RBP9.84□□□□□ -0.83
LIG4-204ENST00000611712 NEDD4P46934 1319 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 UBR1Q8IWV7 1749 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 MPHOSPH10O00566 681 aaKnown RBP9.84□□□□□ -0.83
LIG4-204ENST00000611712 MMP1P03956 469 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 PPP2R3AQ06190 1150 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 TMEM266Q2M3C6 531 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 DESI2Q9BSY9 194 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 RAB34Q9BZG1 259 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 BLZF1Q9H2G9 400 aa9.84□□□□□ -0.83
LIG4-204ENST00000611712 FOXP1Q9H334 677 aaPredicted RBP9.84□□□□□ -0.83
LIG4-204ENST00000611712 NRXN3Q9Y4C0 1643 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 RFC4P35249 363 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 CRKLP46109 303 aaKnown RBP9.83□□□□□ -0.84
LIG4-204ENST00000611712 ASIC1P78348 528 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 SUSD4Q5VX71 490 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 CSRNP2Q9H175 543 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 CTAGE15A4D2H0 777 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 ERVV-1B6SEH8 477 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 LDHBP07195 334 aaKnown RBP9.83□□□□□ -0.84
LIG4-204ENST00000611712 CTAGE8P0CG41 777 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 GSTO1P78417 241 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 CACNA2D4Q7Z3S7 1137 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 CTAGE6Q86UF2 777 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 CTAGE4Q8IX94 777 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 NYXQ9GZU5 481 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 ANKRD2Q9GZV1 360 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 PPP2R2CQ9Y2T4 447 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 MEGF6O75095 1541 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 LOC102724428A0A0B4J2F2 783 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 WDHD1O75717 1129 aaPredicted RBP9.83□□□□□ -0.84
LIG4-204ENST00000611712 SIK1P57059 783 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 ANTXR2P58335 489 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 NCBP1Q09161 790 aaKnown RBP9.83□□□□□ -0.84
LIG4-204ENST00000611712 WWC2Q6AWC2 1192 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 ZSCAN29Q8IWY8 852 aaPredicted RBP9.83□□□□□ -0.84
LIG4-204ENST00000611712 LUC7LQ9NQ29 371 aaKnown RBP9.83□□□□□ -0.84
LIG4-204ENST00000611712 GUCA1BQ9UMX6 200 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 PCDHB6Q9Y5E3 794 aa9.83□□□□□ -0.84
LIG4-204ENST00000611712 CASP7P55210 303 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 CCDC96Q2M329 555 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 IQCEQ6IPM2 695 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 FAM114A1Q8IWE2 563 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 CRACR2BQ8N4Y2 399 aaPredicted RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 CEP112Q8N8E3 955 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 TRIML1Q8N9V2 468 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 TAB2Q9NYJ8 693 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 LUC7L2Q9Y383 392 aaKnown RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 WDR19Q8NEZ3 1342 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 CDHR2Q9BYE9 1310 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 AKAP12Q02952 1782 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 USO1O60763 962 aaKnown RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 RBM5P52756 815 aaKnown RBP eCLIP9.82□□□□□ -0.84
LIG4-204ENST00000611712 RPS8P62241 208 aaKnown RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 ENOX2Q16206 610 aaKnown RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 ENGASEQ8NFI3 743 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 CRACR2AQ9BSW2 395 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 RNF26Q9BY78 433 aaPredicted RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 LY9Q9HBG7 655 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 MAN1B1Q9UKM7 699 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 CYP2D7A0A087X1C5 515 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 DYNLL1P63167 89 aaKnown RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 TFAP4Q01664 338 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 PDE4CQ08493 712 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 PAK1Q13153 545 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 PTGDRQ13258 359 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 SYMPKQ92797 1274 aaKnown RBP9.82□□□□□ -0.84
LIG4-204ENST00000611712 TRERF1Q96PN7 1200 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 JADE2Q9NQC1 790 aa9.82□□□□□ -0.84
LIG4-204ENST00000611712 FGFR1OPO95684 399 aaKnown RBP9.81□□□□□ -0.84
LIG4-204ENST00000611712 CSF1RP07333 972 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 RHOXF2BP0C7M4 288 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 CYP19A1P11511 503 aaPredicted RBP9.81□□□□□ -0.84
LIG4-204ENST00000611712 PLCD1P51178 756 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 LETM2Q2VYF4 491 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 TDRD12Q587J7 1177 aaKnown RBP9.81□□□□□ -0.84
LIG4-204ENST00000611712 RESP18Q5W5W9 173 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 SHC4Q6S5L8 630 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms