RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
CTCFL-220ENST00000608858 KAZALD1Q96I82 304 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 GAS2L1Q99501 681 aaPredicted RBP11.66□□□□□ -0.54
CTCFL-220ENST00000608858 C1QTNF1Q9BXJ1 281 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 DDX20Q9UHI6 824 aaKnown RBP11.66□□□□□ -0.54
CTCFL-220ENST00000608858 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.65□□□□□ -0.54
CTCFL-220ENST00000608858 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.65□□□□□ -0.54
CTCFL-220ENST00000608858 ATP2B2Q01814 1243 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 TFF2Q03403 129 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 RALBP1Q15311 655 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 MORN1Q5T089 497 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 MFSD14CQ5VZR4 134 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 TRPV1Q8NER1 839 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 SOCS4Q8WXH5 440 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 LPAR1Q92633 364 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 TIFAQ96CG3 184 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 PDLIM7Q9NR12 457 aa11.65□□□□□ -0.54
CTCFL-220ENST00000608858 DNM1LO00429 736 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 ENTPD3O75355 529 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 IFIT1P09914 478 aaKnown RBP11.64□□□□□ -0.55
CTCFL-220ENST00000608858 MAPK4P31152 587 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 HERVK_113P62684 666 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 TLE2Q04725 743 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 ADGRE1Q14246 886 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 IDI2Q9BXS1 227 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 HCN4Q9Y3Q4 1203 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 NCOR1O75376 2440 aa11.64□□□□□ -0.55
CTCFL-220ENST00000608858 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 FAM86C2PA6NEL3 165 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 USP17L5A8MUK1 530 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 NBPF7P0C2Y1 421 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-220ENST00000608858 BMP1P13497 986 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 ERVK-24P63145 666 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 MAP2K5Q13163 448 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 MTMR2Q13614 643 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 PRAMEF19Q5SWL8 479 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 MICALL1Q8N3F8 863 aa11.63□□□□□ -0.55
CTCFL-220ENST00000608858 BICC1Q9H694 974 aaKnown RBP11.63□□□□□ -0.55
CTCFL-220ENST00000608858 SYNGAP1Q96PV0 1343 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 KBTBD13C9JR72 458 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 RAG1P15918 1043 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 FGFR2P21802 821 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 KCNQ1P51787 676 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 JAG1P78504 1218 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-220ENST00000608858 ARRDC4Q8NCT1 418 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 NPLOC4Q8TAT6 608 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 APBA2Q99767 749 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 TMOD4Q9NZQ9 345 aa11.62□□□□□ -0.55
CTCFL-220ENST00000608858 CAP2P40123 477 aa11.61□□□□□ -0.55
CTCFL-220ENST00000608858 BTDP43251 543 aa11.61□□□□□ -0.55
CTCFL-220ENST00000608858 PUM3Q15397 648 aaKnown RBP11.61□□□□□ -0.55
CTCFL-220ENST00000608858 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
CTCFL-220ENST00000608858 SNX27Q96L92 541 aa11.61□□□□□ -0.55
CTCFL-220ENST00000608858 ABCF2Q9UG63 623 aa11.61□□□□□ -0.55
CTCFL-220ENST00000608858 DOCK1Q14185 1865 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 MAST2Q6P0Q8 1798 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 VAMP4O75379 141 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 SLC5A1P13866 664 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 HOXA7P31268 230 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-220ENST00000608858 BACE1P56817 501 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 FPGSQ05932 587 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 TMEM31Q5JXX7 168 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 AKNAD1Q5T1N1 836 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 PBX4Q9BYU1 374 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-220ENST00000608858 TMEM39AQ9NV64 488 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 TACC3Q9Y6A5 838 aa11.6□□□□□ -0.55
CTCFL-220ENST00000608858 DOCK2Q92608 1830 aa11.59□□□□□ -0.55
CTCFL-220ENST00000608858 TBC1D12O60347 775 aa11.59□□□□□ -0.55
CTCFL-220ENST00000608858 PQBP1O60828 265 aaKnown RBP11.59□□□□□ -0.55
CTCFL-220ENST00000608858 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
CTCFL-220ENST00000608858 ZYXQ15942 572 aaKnown RBP11.59□□□□□ -0.55
CTCFL-220ENST00000608858 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
CTCFL-220ENST00000608858 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.59□□□□□ -0.552e-13■□□□□ 8.7
CTCFL-220ENST00000608858 SRCIN1Q9C0H9 1055 aa11.59□□□□□ -0.55
CTCFL-220ENST00000608858 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
CTCFL-220ENST00000608858 MYBBP1AQ9BQG0 1328 aaKnown RBP11.59□□□□□ -0.55
CTCFL-220ENST00000608858 PLXNA1Q9UIW2 1896 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 MSCO60682 206 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 CNMDO75829 334 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 CLTBP09497 229 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 ACRP10323 421 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 PTPREP23469 700 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 PHKA1P46020 1223 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 DZIP1Q86YF9 867 aaKnown RBP11.58□□□□□ -0.56
CTCFL-220ENST00000608858 ANKRD44Q8N8A2 993 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 LPIN2Q92539 896 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 SALL2Q9Y467 1007 aaPredicted RBP11.58□□□□□ -0.56
CTCFL-220ENST00000608858 RLFQ13129 1914 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 MYH2Q9UKX2 1941 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 FRMPD3Q5JV73 1810 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 UTYO14607 1347 aa11.58□□□□□ -0.56
CTCFL-220ENST00000608858 XIRP2A4UGR9 3374 aa11.57□□□□□ -0.56
CTCFL-220ENST00000608858 SLC15A5A6NIM6 579 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms