RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 GABPB1Q06547 395 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 PLEKHA4Q9H4M7 779 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 SRP68Q9UHB9 627 aaKnown RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 BCS1LQ9Y276 419 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 LDHCP07864 332 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 CLCN6P51797 869 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 FAM47AQ5JRC9 791 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 SPATA5Q8NB90 893 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 ZCCHC17Q9NP64 241 aaKnown RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 POLR3EQ9NVU0 708 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 MYO1BO43795 1136 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 KRT9P35527 623 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 AKNAD1Q5T1N1 836 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 CACNA2D4Q7Z3S7 1137 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 MACROD2A1Z1Q3 448 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 TMEM132AQ24JP5 1023 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
CTCFL-216ENST00000608263 TMTC2Q8N394 836 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 NBPF15Q8N660 670 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZSWIM5Q9P217 1185 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 UBE2Q2LH0YL09 131 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 DEXIO95424 95 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZNF76P36508 570 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ARID5AQ03989 594 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 PDE8AO60658 829 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZSCAN20P17040 1043 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-216ENST00000608263 CDC25BP30305 580 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 PDIA6Q15084 440 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 CTR9Q6PD62 1173 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 CYB5R4Q7L1T6 521 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 MLKLQ8NB16 471 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 GBP3Q9H0R5 595 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
CTCFL-216ENST00000608263 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 CYP2D7A0A087X1C5 515 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 AKR1B10O60218 316 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 MCAMP43121 646 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 SMC1AQ14683 1233 aaKnown RBP11.71□□□□□ -0.53
CTCFL-216ENST00000608263 PUM3Q15397 648 aaKnown RBP11.71□□□□□ -0.53
CTCFL-216ENST00000608263 TBC1D10CQ8IV04 446 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 FAM107BQ9H098 131 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 PIH1D3Q9NQM4 214 aaKnown RBP11.71□□□□□ -0.53
CTCFL-216ENST00000608263 PCDHB6Q9Y5E3 794 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 ZMYM6O95789 1325 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 TCHHQ07283 1943 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 H7C1W4 665 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 CDC27P30260 824 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 MMRN2Q9H8L6 949 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 FDPSP14324 419 aaKnown RBP11.71□□□□□ -0.54
CTCFL-216ENST00000608263 GYG1P46976 350 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 ASIC1P78348 528 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 IQUBQ8NA54 791 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.54
CTCFL-216ENST00000608263 CSRNP2Q9H175 543 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 SENP2Q9HC62 589 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 SAP30BPQ9UHR5 308 aaKnown RBP11.71□□□□□ -0.54
CTCFL-216ENST00000608263 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.54
CTCFL-216ENST00000608263 CCZ1BP86790 482 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CCZ1P86791 482 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 TCP11L1Q9NUJ3 509 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 ADAMTS13Q76LX8 1427 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 SOWAHDA6NJG2 315 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 E4F1Q66K89 784 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 SARM1Q6SZW1 724 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 ZNF804AQ7Z570 1209 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 LPIN2Q92539 896 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CTAGE1Q96RT6 745 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CRNKL1Q9BZJ0 848 aaKnown RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 UBA5Q9GZZ9 404 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 ZNF287Q9HBT7 754 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 DLC1Q96QB1 1528 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 H0YIN7 160 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 ZBTB22O15209 634 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CTSWP56202 376 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 EIF6P56537 245 aaKnown RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 RNASE9P60153 205 aaKnown RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 HLFQ16534 295 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 DPP8Q6V1X1 898 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms