RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 CDAN1Q8IWY9 1227 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 ZNF444Q8N0Y2 327 aaPredicted RBP20.54■□□□□ 0.88
DDX49-213ENST00000602113 TMEM39BQ9GZU3 492 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 SWAP70Q9UH65 585 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 PGAP2Q9UHJ9 254 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 HACL1Q9UJ83 578 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 SCAF8Q9UPN6 1271 aaKnown RBP20.54■□□□□ 0.88
DDX49-213ENST00000602113 KLF18A0A0U1RQI7 1052 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 FAM196BA6NMK8 535 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 PDIA3P30101 505 aaKnown RBP20.54■□□□□ 0.88
DDX49-213ENST00000602113 SART3Q15020 963 aaKnown RBP20.54■□□□□ 0.88
DDX49-213ENST00000602113 DPY19L2Q6NUT2 758 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 SGMS1Q86VZ5 419 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 ENAHQ8N8S7 591 aaPredicted RBP20.54■□□□□ 0.88
DDX49-213ENST00000602113 ZNF274Q96GC6 653 aaPredicted RBP20.54■□□□□ 0.88
DDX49-213ENST00000602113 CSRNP1Q96S65 589 aa20.54■□□□□ 0.88
DDX49-213ENST00000602113 WTAPQ15007 396 aa20.53■□□□□ 0.88
DDX49-213ENST00000602113 IQCA1Q86XH1 822 aa20.53■□□□□ 0.88
DDX49-213ENST00000602113 FOXP4Q8IVH2 680 aaPredicted RBP20.53■□□□□ 0.88
DDX49-213ENST00000602113 CCDC83Q8IWF9 413 aa20.53■□□□□ 0.88
DDX49-213ENST00000602113 CRACR2BQ8N4Y2 399 aaPredicted RBP20.53■□□□□ 0.88
DDX49-213ENST00000602113 L3MBTL3Q96JM7 780 aaPredicted RBP20.53■□□□□ 0.88
DDX49-213ENST00000602113 SLKQ9H2G2 1235 aaPredicted RBP20.53■□□□□ 0.88
DDX49-213ENST00000602113 IL17RBQ9NRM6 502 aa20.53■□□□□ 0.88
DDX49-213ENST00000602113 PFKFB2O60825 505 aa20.52■□□□□ 0.88
DDX49-213ENST00000602113 LMOD1P29536 600 aaPredicted RBP20.52■□□□□ 0.88
DDX49-213ENST00000602113 RASA3Q14644 834 aa20.52■□□□□ 0.88
DDX49-213ENST00000602113 INTS4Q96HW7 963 aaKnown RBP20.52■□□□□ 0.88
DDX49-213ENST00000602113 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
DDX49-213ENST00000602113 ERICH2A1L162 156 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 GLTPD2A6NH11 291 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 TSPY3P0CV98 308 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 TSPY8P0CW00 308 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 NEDD1Q8NHV4 660 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 GTF3C6Q969F1 213 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 ADARB2Q9NS39 739 aaKnown RBP20.51■□□□□ 0.87
DDX49-213ENST00000602113 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 NAP1L2Q9ULW6 460 aaPredicted RBP20.51■□□□□ 0.87
DDX49-213ENST00000602113 AKR1B1P15121 316 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 DDIT3P35638 169 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 TNNI2P48788 182 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 SCRN1Q12765 414 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 ANGEL2Q5VTE6 544 aaKnown RBP20.51■□□□□ 0.87
DDX49-213ENST00000602113 RCSD1Q6JBY9 416 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 APOA5Q6Q788 366 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 NFXL1Q6ZNB6 911 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 RAB11FIP4Q86YS3 637 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.51■□□□□ 0.87
DDX49-213ENST00000602113 TAOK2Q9UL54 1235 aa20.51■□□□□ 0.87
DDX49-213ENST00000602113 GOLGA8BA8MQT2 603 aa20.5■□□□□ 0.87
DDX49-213ENST00000602113 DTNBO60941 627 aa20.5■□□□□ 0.87
DDX49-213ENST00000602113 TNFAIP1Q13829 316 aa20.5■□□□□ 0.87
DDX49-213ENST00000602113 TATDN1Q6P1N9 297 aa20.5■□□□□ 0.87
DDX49-213ENST00000602113 TMTC2Q8N394 836 aa20.5■□□□□ 0.87
DDX49-213ENST00000602113 TEPSINQ96N21 525 aa20.5■□□□□ 0.87
DDX49-213ENST00000602113 CCDC69A6NI79 296 aa20.49■□□□□ 0.87
DDX49-213ENST00000602113 CCT2P78371 535 aaKnown RBP20.49■□□□□ 0.87
DDX49-213ENST00000602113 TRIM34Q9BYJ4 488 aa20.49■□□□□ 0.87
DDX49-213ENST00000602113 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
DDX49-213ENST00000602113 GGA3Q9NZ52 723 aa20.49■□□□□ 0.87
DDX49-213ENST00000602113 PLIN4Q96Q06 1357 aa20.49■□□□□ 0.87
DDX49-213ENST00000602113 IFIT1BQ5T764 474 aaKnown RBP20.48■□□□□ 0.87
DDX49-213ENST00000602113 ANKS1AQ92625 1134 aa20.48■□□□□ 0.87
DDX49-213ENST00000602113 MYL10Q9BUA6 226 aa20.48■□□□□ 0.87
DDX49-213ENST00000602113 DEFB129Q9H1M3 183 aa20.48■□□□□ 0.87
DDX49-213ENST00000602113 HERC5Q9UII4 1024 aaKnown RBP20.48■□□□□ 0.87
DDX49-213ENST00000602113 SLC12A7Q9Y666 1083 aa20.48■□□□□ 0.87
DDX49-213ENST00000602113 IGKV6D-41A0A0C4DH26 115 aa20.48■□□□□ 0.87
DDX49-213ENST00000602113 RXRAP19793 462 aa20.48■□□□□ 0.87
DDX49-213ENST00000602113 DGKHQ86XP1 1220 aa20.48■□□□□ 0.87
DDX49-213ENST00000602113 APOBEC3FQ8IUX4 373 aaKnown RBP20.48■□□□□ 0.87
DDX49-213ENST00000602113 ZBTB43O43298 467 aa20.47■□□□□ 0.87
DDX49-213ENST00000602113 RRP1BQ14684 758 aaKnown RBP20.47■□□□□ 0.87
DDX49-213ENST00000602113 SHROOM1Q2M3G4 852 aaPredicted RBP20.47■□□□□ 0.87
DDX49-213ENST00000602113 CERKLQ49MI3 558 aaPredicted RBP20.47■□□□□ 0.87
DDX49-213ENST00000602113 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
DDX49-213ENST00000602113 ZNF654Q8IZM8 581 aa20.47■□□□□ 0.87
DDX49-213ENST00000602113 CCDC17Q96LX7 622 aa20.47■□□□□ 0.87
DDX49-213ENST00000602113 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.47■□□□□ 0.87
DDX49-213ENST00000602113 NOVP48745 357 aa20.46■□□□□ 0.87
DDX49-213ENST00000602113 MAP3K10Q02779 954 aa20.46■□□□□ 0.87
DDX49-213ENST00000602113 MICU3Q86XE3 530 aa20.46■□□□□ 0.87
DDX49-213ENST00000602113 CEP95Q96GE4 821 aa20.46■□□□□ 0.87
DDX49-213ENST00000602113 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.46■□□□□ 0.87
DDX49-213ENST00000602113 POTECB2RU33 542 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 TBC1D12O60347 775 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 CTDNEP1O95476 244 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 METAP2P50579 478 aaKnown RBP eCLIP20.45■□□□□ 0.86
DDX49-213ENST00000602113 JAG1P78504 1218 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 MIGA2Q7L4E1 593 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 CWC22Q9HCG8 908 aaKnown RBP20.45■□□□□ 0.86
DDX49-213ENST00000602113 FAM217BQ9NTX9 383 aaPredicted RBP20.45■□□□□ 0.86
DDX49-213ENST00000602113 MYH8P13535 1937 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 NID2Q14112 1375 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 EPHX2P34913 555 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 SYNE3Q6ZMZ3 975 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 CLEC10AQ8IUN9 316 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 CCDC144CPQ8IYA2 1237 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 MTMR4Q9NYA4 1195 aa20.45■□□□□ 0.86
DDX49-213ENST00000602113 SMC3Q9UQE7 1217 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms