RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 FAM196BA6NMK8 535 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 ZNF213O14771 459 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 ST18O60284 1047 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 FGAP02671 866 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 ASNSP08243 561 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 CYP2D6P10635 497 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 PCP11498 1178 aaKnown RBP11.92□□□□□ -0.5
UPF1-213ENST00000601981 INPP5BP32019 993 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 NT5C2P49902 561 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 VGLL4Q14135 290 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 CERKLQ49MI3 558 aaPredicted RBP11.92□□□□□ -0.5
UPF1-213ENST00000601981 TATDN1Q6P1N9 297 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 C16orf86Q6ZW13 317 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 CCDC17Q96LX7 622 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 RNF41Q9H4P4 317 aaPredicted RBP11.92□□□□□ -0.5
UPF1-213ENST00000601981 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
UPF1-213ENST00000601981 FZD1Q9UP38 647 aa11.92□□□□□ -0.5
UPF1-213ENST00000601981 CYP2D7A0A087X1C5 515 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 PHF20L1A8MW92 1017 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
UPF1-213ENST00000601981 ZBTB48P10074 688 aaPredicted RBP11.91□□□□□ -0.5
UPF1-213ENST00000601981 CAP2P40123 477 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 CDK8P49336 464 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 GABPAQ06546 454 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 NOGQ13253 232 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 GRM1Q13255 1194 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 ABCB5Q2M3G0 1257 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.91□□□□□ -0.5
UPF1-213ENST00000601981 ERO1BQ86YB8 467 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 KCNB2Q92953 911 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 ZKSCAN4Q969J2 545 aaPredicted RBP11.91□□□□□ -0.5
UPF1-213ENST00000601981 CAPNS2Q96L46 248 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 ELP3Q9H9T3 547 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 AS3MTQ9HBK9 375 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 ANAPC4Q9UJX5 808 aa11.91□□□□□ -0.5
UPF1-213ENST00000601981 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 PTPRFP10586 1907 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 MYH4Q9Y623 1939 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 MPHOSPH10O00566 681 aaKnown RBP11.9□□□□□ -0.5
UPF1-213ENST00000601981 FOXP2O15409 715 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 GDF11O95390 407 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 SLC10A3P09131 477 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 SHMT1P34896 483 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 PTH1RQ03431 593 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 PPATQ06203 517 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 PPP4R3BQ5MIZ7 849 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 RNF20Q5VTR2 975 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 RASAL3Q86YV0 1011 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
UPF1-213ENST00000601981 ZNF444Q8N0Y2 327 aaPredicted RBP11.9□□□□□ -0.5
UPF1-213ENST00000601981 MAP4K1Q92918 833 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 CLMNQ96JQ2 1002 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 DNAJC18Q9H819 358 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 TOMM22Q9NS69 142 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 SNCAIPQ9Y6H5 919 aa11.9□□□□□ -0.5
UPF1-213ENST00000601981 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
UPF1-213ENST00000601981 USP17L5A8MUK1 530 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 CD2BP2O95400 341 aaKnown RBP11.89□□□□□ -0.51
UPF1-213ENST00000601981 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
UPF1-213ENST00000601981 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
UPF1-213ENST00000601981 MCM2P49736 904 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 HAND2P61296 217 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 CTDSPL2Q05D32 466 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 TRDNQ13061 729 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 PPIL2Q13356 520 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 NECTIN1Q15223 517 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 CYP4F22Q6NT55 531 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 MFSD6Q6ZSS7 791 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 TMEM179Q6ZVK1 233 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 STK11IPQ8N1F8 1099 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 OTUD5Q96G74 571 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 CNNM2Q9H8M5 875 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 ZBTB21Q9ULJ3 1066 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 RBM8AQ9Y5S9 174 aaKnown RBP11.89□□□□□ -0.51
UPF1-213ENST00000601981 SNX14Q9Y5W7 946 aa11.89□□□□□ -0.51
UPF1-213ENST00000601981 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
UPF1-213ENST00000601981 MANSC4A6NHS7 340 aaPredicted RBP11.88□□□□□ -0.51
UPF1-213ENST00000601981 TSPY2A6NKD2 308 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 GH2P01242 217 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 TSPY3P0CV98 308 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 TSPY8P0CW00 308 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 PTPRAP18433 802 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 MAP2K2P36507 400 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 GTF2A2P52657 109 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 SREBF2Q12772 1141 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 RAB3GAP1Q15042 981 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 AKNAD1Q5T1N1 836 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 SPRYD7Q5W111 196 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 SLC44A5Q8NCS7 719 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 SH2D4AQ9H788 454 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 THSD7BQ9C0I4 1608 aa11.88□□□□□ -0.51
UPF1-213ENST00000601981 ORC4O43929 436 aa11.87□□□□□ -0.51
UPF1-213ENST00000601981 CAPN15O75808 1086 aa11.87□□□□□ -0.51
UPF1-213ENST00000601981 SLURP2P0DP57 97 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms