RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 DNAJC18Q9H819 358 aa21.04■□□□□ 0.96
SMG9-210ENST00000600097 PALD1Q9ULE6 856 aa21.04■□□□□ 0.96
SMG9-210ENST00000600097 ATAD5Q96QE3 1844 aa21.04■□□□□ 0.96
SMG9-210ENST00000600097 SURF6O75683 361 aaKnown RBP21.03■□□□□ 0.96
SMG9-210ENST00000600097 HLA-DOAP06340 250 aa21.03■□□□□ 0.96
SMG9-210ENST00000600097 HERVK_113P62684 666 aa21.03■□□□□ 0.96
SMG9-210ENST00000600097 ATP8B2P98198 1209 aa21.03■□□□□ 0.96
SMG9-210ENST00000600097 ADGRA1Q86SQ6 560 aa21.03■□□□□ 0.96
SMG9-210ENST00000600097 GTF3C2Q8WUA4 911 aaPredicted RBP21.03■□□□□ 0.96
SMG9-210ENST00000600097 SOCS4Q8WXH5 440 aa21.03■□□□□ 0.96
SMG9-210ENST00000600097 P2RX7Q99572 595 aaKnown RBP21.03■□□□□ 0.96
SMG9-210ENST00000600097 NUDT12Q9BQG2 462 aa21.03■□□□□ 0.96
SMG9-210ENST00000600097 XRCC5P13010 732 aaKnown RBP21.02■□□□□ 0.96
SMG9-210ENST00000600097 MAPK4P31152 587 aa21.02■□□□□ 0.96
SMG9-210ENST00000600097 ZAP70P43403 619 aa21.02■□□□□ 0.96
SMG9-210ENST00000600097 JAG1P78504 1218 aa21.02■□□□□ 0.96
SMG9-210ENST00000600097 CERS3Q8IU89 383 aa21.02■□□□□ 0.96
SMG9-210ENST00000600097 TRMT44Q8IYL2 757 aaKnown RBP21.02■□□□□ 0.96
SMG9-210ENST00000600097 DIS3LQ8TF46 1054 aaKnown RBP21.02■□□□□ 0.96
SMG9-210ENST00000600097 NBPF3Q9H094 633 aa21.02■□□□□ 0.96
SMG9-210ENST00000600097 ZBTB21Q9ULJ3 1066 aa21.02■□□□□ 0.96
SMG9-210ENST00000600097 MAST2Q6P0Q8 1798 aa21.01■□□□□ 0.95
SMG9-210ENST00000600097 GDF11O95390 407 aa21.01■□□□□ 0.95
SMG9-210ENST00000600097 CYP2B6P20813 491 aa21.01■□□□□ 0.95
SMG9-210ENST00000600097 TRIB2Q92519 343 aa21.01■□□□□ 0.95
SMG9-210ENST00000600097 STAP2Q9UGK3 403 aa21.01■□□□□ 0.95
SMG9-210ENST00000600097 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
SMG9-210ENST00000600097 TRIM32Q13049 653 aa21■□□□□ 0.95
SMG9-210ENST00000600097 PDE3AQ14432 1141 aa21■□□□□ 0.95
SMG9-210ENST00000600097 MAP3K21Q5TCX8 1036 aa21■□□□□ 0.95
SMG9-210ENST00000600097 CCAR1Q8IX12 1150 aaKnown RBP21■□□□□ 0.95
SMG9-210ENST00000600097 TXNRD2Q9NNW7 524 aa21■□□□□ 0.95
SMG9-210ENST00000600097 PIH1D3Q9NQM4 214 aaKnown RBP21■□□□□ 0.95
SMG9-210ENST00000600097 OGDHLQ9ULD0 1010 aa21■□□□□ 0.95
SMG9-210ENST00000600097 SZT2Q5T011 3432 aa21■□□□□ 0.95
SMG9-210ENST00000600097 SIPA1L1O43166 1804 aa20.99■□□□□ 0.95
SMG9-210ENST00000600097 CYP7A1P22680 504 aa20.99■□□□□ 0.95
SMG9-210ENST00000600097 USP17L2Q6R6M4 530 aa20.99■□□□□ 0.95
SMG9-210ENST00000600097 RBPJLQ9UBG7 517 aa20.99■□□□□ 0.95
SMG9-210ENST00000600097 SAP30BPQ9UHR5 308 aaKnown RBP20.99■□□□□ 0.95
SMG9-210ENST00000600097 DBNLQ9UJU6 430 aaKnown RBP20.99■□□□□ 0.95
SMG9-210ENST00000600097 PRKAR2AP13861 404 aaKnown RBP20.98■□□□□ 0.95
SMG9-210ENST00000600097 BMP8BP34820 402 aa20.98■□□□□ 0.95
SMG9-210ENST00000600097 ERVK-9P63128 1117 aa20.98■□□□□ 0.95
SMG9-210ENST00000600097 ERVK-24P63145 666 aa20.98■□□□□ 0.95
SMG9-210ENST00000600097 SHROOM1Q2M3G4 852 aaPredicted RBP20.98■□□□□ 0.95
SMG9-210ENST00000600097 TMED8Q6PL24 325 aaPredicted RBP20.98■□□□□ 0.95
SMG9-210ENST00000600097 FTSJ3Q8IY81 847 aaKnown RBP20.98■□□□□ 0.95
SMG9-210ENST00000600097 C7orf61Q8IZ16 206 aa20.98■□□□□ 0.95
SMG9-210ENST00000600097 GDF15Q99988 308 aa20.98■□□□□ 0.95
SMG9-210ENST00000600097 C11orf49Q9H6J7 331 aa20.98■□□□□ 0.95
SMG9-210ENST00000600097 EMILIN3Q9NT22 766 aa20.98■□□□□ 0.95
SMG9-210ENST00000600097 IDH1O75874 414 aaKnown RBP20.97■□□□□ 0.95
SMG9-210ENST00000600097 ZKSCAN1P17029 563 aaPredicted RBP20.97■□□□□ 0.95
SMG9-210ENST00000600097 MNX1P50219 401 aaPredicted RBP20.97■□□□□ 0.95
SMG9-210ENST00000600097 DYNLL1P63167 89 aaKnown RBP20.97■□□□□ 0.95
SMG9-210ENST00000600097 PEX10O60683 326 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 GH2P01242 217 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 RGS2P41220 211 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 USP5P45974 858 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 Q3C1V9 767 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 TATDN1Q6P1N9 297 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 GPR142Q7Z601 462 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 USP6NLQ92738 828 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 C12orf42Q96LP6 360 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 PAGR1Q9BTK6 254 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 CCDC8Q9H0W5 538 aaPredicted RBP20.96■□□□□ 0.95
SMG9-210ENST00000600097 EHD4Q9H223 541 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 C1orf115Q9H7X2 142 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 SERPINB13Q9UIV8 391 aa20.96■□□□□ 0.95
SMG9-210ENST00000600097 PLEKHH3Q7Z736 793 aa20.95■□□□□ 0.94
SMG9-210ENST00000600097 TTC6Q86TZ1 520 aa20.95■□□□□ 0.94
SMG9-210ENST00000600097 EAF2Q96CJ1 260 aaPredicted RBP20.95■□□□□ 0.94
SMG9-210ENST00000600097 FEZ1Q99689 392 aa20.95■□□□□ 0.94
SMG9-210ENST00000600097 PORCNQ9H237 461 aa20.95■□□□□ 0.94
SMG9-210ENST00000600097 TLR7Q9NYK1 1049 aaKnown RBP20.95■□□□□ 0.94
SMG9-210ENST00000600097 RABGAP1Q9Y3P9 1069 aa20.95■□□□□ 0.94
SMG9-210ENST00000600097 FOCADQ5VW36 1801 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L15C9J2P7 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L13C9JLJ4 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L11C9JVI0 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L18D6R9N7 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L22D6RA61 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L17D6RBQ6 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L19D6RCP7 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L20D6RJB6 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 SOX1O00570 391 aaPredicted RBP20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP14P54578 494 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 CCNA1P78396 465 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 CACNB2Q08289 660 aaPredicted RBP20.94■□□□□ 0.94
SMG9-210ENST00000600097 USP17L24Q0WX57 530 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 MAP3K12Q12852 859 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 MORN1Q5T089 497 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 ITPRIPQ8IWB1 547 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 MAGEB6Q8N7X4 407 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 MIGA1Q8NAN2 632 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 APBA2Q99767 749 aa20.94■□□□□ 0.94
SMG9-210ENST00000600097 CWC22Q9HCG8 908 aaKnown RBP20.94■□□□□ 0.94
SMG9-210ENST00000600097 ZMYND8Q9ULU4 1186 aaPredicted RBP20.94■□□□□ 0.94
SMG9-210ENST00000600097 PLXNB2O15031 1838 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms