RNA–Protein interactions for RNA: ENST00000599570.5

SNRPA-207, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-207ENST00000599570 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
SNRPA-207ENST00000599570 CXCL11O14625 94 aa16.46■□□□□ 0.23
SNRPA-207ENST00000599570 TM4SF4P48230 202 aa16.46■□□□□ 0.23
SNRPA-207ENST00000599570 ABCB5Q2M3G0 1257 aa16.46■□□□□ 0.23
SNRPA-207ENST00000599570 C12orf60Q5U649 245 aa16.46■□□□□ 0.23
SNRPA-207ENST00000599570 TATDN1Q6P1N9 297 aa16.46■□□□□ 0.23
SNRPA-207ENST00000599570 IFNL3Q8IZI9 196 aa16.46■□□□□ 0.23
SNRPA-207ENST00000599570 ZHX2Q9Y6X8 837 aa16.46■□□□□ 0.23
SNRPA-207ENST00000599570 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 MPHOSPH10O00566 681 aaKnown RBP16.45■□□□□ 0.22
SNRPA-207ENST00000599570 IRF6O14896 467 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 CDC45O75419 566 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 GDF11O95390 407 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 PLCD1P51178 756 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 PDE4BQ07343 736 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 CTR9Q6PD62 1173 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 FASTKD5Q7L8L6 764 aaKnown RBP16.45■□□□□ 0.22
SNRPA-207ENST00000599570 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
SNRPA-207ENST00000599570 CCDC17Q96LX7 622 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 DNAJC18Q9H819 358 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
SNRPA-207ENST00000599570 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
SNRPA-207ENST00000599570 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 ROBO3Q96MS0 1386 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 PTPRFP10586 1907 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 ZMYM6O95789 1325 aa16.45■□□□□ 0.22
SNRPA-207ENST00000599570 GJA5P36382 358 aa16.44■□□□□ 0.22
SNRPA-207ENST00000599570 C16orf86Q6ZW13 317 aa16.44■□□□□ 0.22
SNRPA-207ENST00000599570 IFNL1Q8IU54 200 aa16.44■□□□□ 0.22
SNRPA-207ENST00000599570 ZNF280CQ8ND82 737 aa16.44■□□□□ 0.22
SNRPA-207ENST00000599570 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
SNRPA-207ENST00000599570 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
SNRPA-207ENST00000599570 KCNH4Q9UQ05 1017 aa16.44■□□□□ 0.22
SNRPA-207ENST00000599570 TESPA1A2RU30 521 aaPredicted RBP16.43■□□□□ 0.22
SNRPA-207ENST00000599570 TRIM75PA6NK02 468 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 GH2P01242 217 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 CYP2D6P10635 497 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 HSPD1P10809 573 aaKnown RBP16.43■□□□□ 0.22
SNRPA-207ENST00000599570 SHMT1P34896 483 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 GABPAQ06546 454 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNRPA-207ENST00000599570 TMEM179Q6ZVK1 233 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 ZIC5Q96T25 663 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 FEZ1Q99689 392 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 SH2D4AQ9H788 454 aa16.43■□□□□ 0.22
SNRPA-207ENST00000599570 SGSM2O43147 1006 aa16.42■□□□□ 0.22
SNRPA-207ENST00000599570 TRPA1O75762 1119 aa16.42■□□□□ 0.22
SNRPA-207ENST00000599570 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
SNRPA-207ENST00000599570 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
SNRPA-207ENST00000599570 DSCC1Q9BVC3 393 aa16.42■□□□□ 0.22
SNRPA-207ENST00000599570 RNF186Q9NXI6 227 aa16.42■□□□□ 0.22
SNRPA-207ENST00000599570 TMOD4Q9NZQ9 345 aa16.42■□□□□ 0.22
SNRPA-207ENST00000599570 AFG3L2Q9Y4W6 797 aa16.42■□□□□ 0.22
SNRPA-207ENST00000599570 MYH4Q9Y623 1939 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 CYP2D7A0A087X1C5 515 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 A0A0G2JLL6 359 aaPredicted RBP16.41■□□□□ 0.22
SNRPA-207ENST00000599570 FOXN1O15353 648 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 CDK8P49336 464 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 USP14P54578 494 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 PPARAQ07869 468 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 ALX1Q15699 326 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 PPP4R3BQ5MIZ7 849 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 GADL1Q6ZQY3 521 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 KIAA1211Q6ZU35 1233 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 PRRT2Q7Z6L0 340 aaPredicted RBP16.41■□□□□ 0.22
SNRPA-207ENST00000599570 ANKRD23Q86SG2 305 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 PROCA1Q8NCQ7 364 aaPredicted RBP16.41■□□□□ 0.22
SNRPA-207ENST00000599570 BRI3BPQ8WY22 251 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 DYNLL2Q96FJ2 89 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 MS4A4AQ96JQ5 239 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 WDR18Q9BV38 432 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 ARHGEF10LQ9HCE6 1279 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 CTNNA3Q9UI47 895 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
SNRPA-207ENST00000599570 C19orf81C9J6K1 198 aa16.4■□□□□ 0.22
SNRPA-207ENST00000599570 USP17L10C9JJH3 530 aa16.4■□□□□ 0.22
SNRPA-207ENST00000599570 SLURP2P0DP57 97 aa16.4■□□□□ 0.22
SNRPA-207ENST00000599570 SPP2Q13103 211 aa16.4■□□□□ 0.22
SNRPA-207ENST00000599570 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
SNRPA-207ENST00000599570 ZNF444Q8N0Y2 327 aaPredicted RBP16.4■□□□□ 0.22
SNRPA-207ENST00000599570 PARK7Q99497 189 aaKnown RBP16.4■□□□□ 0.22
SNRPA-207ENST00000599570 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
SNRPA-207ENST00000599570 CFHR5Q9BXR6 569 aa16.4■□□□□ 0.22
SNRPA-207ENST00000599570 ZFYVE28Q9HCC9 887 aa16.4■□□□□ 0.22
SNRPA-207ENST00000599570 GREB1LQ9C091 1923 aaPredicted RBP16.4■□□□□ 0.22
SNRPA-207ENST00000599570 LOC285556D6RIA3 1793 aa16.4■□□□□ 0.22
SNRPA-207ENST00000599570 IGF2BP3O00425 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNRPA-207ENST00000599570 FOXP2O15409 715 aa16.39■□□□□ 0.21
SNRPA-207ENST00000599570 FGAP02671 866 aa16.39■□□□□ 0.21
SNRPA-207ENST00000599570 PCP11498 1178 aaKnown RBP16.39■□□□□ 0.21
SNRPA-207ENST00000599570 NT5C2P49902 561 aa16.39■□□□□ 0.21
SNRPA-207ENST00000599570 MTMR2Q13614 643 aa16.39■□□□□ 0.21
SNRPA-207ENST00000599570 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
SNRPA-207ENST00000599570 IL25Q9H293 177 aa16.39■□□□□ 0.21
SNRPA-207ENST00000599570 RNF41Q9H4P4 317 aaPredicted RBP16.39■□□□□ 0.21
SNRPA-207ENST00000599570 SLC45A1Q9Y2W3 748 aa16.39■□□□□ 0.21
SNRPA-207ENST00000599570 HSPA8P11142 646 aaKnown RBP16.38■□□□□ 0.21
SNRPA-207ENST00000599570 BACE1P56817 501 aa16.38■□□□□ 0.21
SNRPA-207ENST00000599570 EVX2Q03828 476 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms