RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 GINM1Q9NU53 330 aa27.24■■□□□ 1.95
CCDC9-204ENST00000599398 ZBTB21Q9ULJ3 1066 aa27.24■■□□□ 1.95
CCDC9-204ENST00000599398 SUPT16HQ9Y5B9 1047 aaKnown RBP27.24■■□□□ 1.95
CCDC9-204ENST00000599398 LACTBP83111 547 aaPredicted RBP27.23■■□□□ 1.95
CCDC9-204ENST00000599398 EXOC6Q8TAG9 804 aa27.23■■□□□ 1.95
CCDC9-204ENST00000599398 AGTPBP1Q9UPW5 1226 aa27.23■■□□□ 1.95
CCDC9-204ENST00000599398 SLC45A1Q9Y2W3 748 aa27.23■■□□□ 1.95
CCDC9-204ENST00000599398 ADGRA2Q96PE1 1338 aa27.22■■□□□ 1.95
CCDC9-204ENST00000599398 BAZ2AQ9UIF9 1905 aaKnown RBP27.22■■□□□ 1.95
CCDC9-204ENST00000599398 MX1P20591 662 aa27.22■■□□□ 1.95
CCDC9-204ENST00000599398 TREML2Q5T2D2 321 aa27.22■■□□□ 1.95
CCDC9-204ENST00000599398 TATDN1Q6P1N9 297 aa27.22■■□□□ 1.95
CCDC9-204ENST00000599398 PROCA1Q8NCQ7 364 aaPredicted RBP27.22■■□□□ 1.95
CCDC9-204ENST00000599398 WDR18Q9BV38 432 aa27.22■■□□□ 1.95
CCDC9-204ENST00000599398 PTPN22Q9Y2R2 807 aa27.22■■□□□ 1.95
CCDC9-204ENST00000599398 GLRX3O76003 335 aaKnown RBP27.21■■□□□ 1.95
CCDC9-204ENST00000599398 GH2P01242 217 aa27.21■■□□□ 1.95
CCDC9-204ENST00000599398 MTMR2Q13614 643 aa27.21■■□□□ 1.95
CCDC9-204ENST00000599398 CERKLQ49MI3 558 aaPredicted RBP27.21■■□□□ 1.95
CCDC9-204ENST00000599398 SMCR8Q8TEV9 937 aaPredicted RBP27.21■■□□□ 1.95
CCDC9-204ENST00000599398 DDRGK1Q96HY6 314 aa27.21■■□□□ 1.95
CCDC9-204ENST00000599398 ARHGAP39Q9C0H5 1083 aa27.21■■□□□ 1.95
CCDC9-204ENST00000599398 PUS7LQ9H0K6 701 aaKnown RBP27.21■■□□□ 1.95
CCDC9-204ENST00000599398 ATP8A2Q9NTI2 1148 aa27.21■■□□□ 1.95
CCDC9-204ENST00000599398 ZSWIM8A7E2V4 1837 aa27.2■■□□□ 1.95
CCDC9-204ENST00000599398 LOC285556D6RIA3 1793 aa27.2■■□□□ 1.95
CCDC9-204ENST00000599398 PI4K2BQ8TCG2 481 aa27.2■■□□□ 1.94
CCDC9-204ENST00000599398 SLC4A4Q9Y6R1 1079 aa27.2■■□□□ 1.94
CCDC9-204ENST00000599398 CYP2D6P10635 497 aa27.19■■□□□ 1.94
CCDC9-204ENST00000599398 SOX10P56693 466 aa27.19■■□□□ 1.94
CCDC9-204ENST00000599398 BACE1P56817 501 aa27.19■■□□□ 1.94
CCDC9-204ENST00000599398 EVX2Q03828 476 aa27.19■■□□□ 1.94
CCDC9-204ENST00000599398 ABCB5Q2M3G0 1257 aa27.19■■□□□ 1.94
CCDC9-204ENST00000599398 RWDD1Q9H446 243 aaPredicted RBP27.19■■□□□ 1.94
CCDC9-204ENST00000599398 TMOD4Q9NZQ9 345 aa27.19■■□□□ 1.94
CCDC9-204ENST00000599398 PNMA3Q9UL41 463 aa27.19■■□□□ 1.94
CCDC9-204ENST00000599398 HTTP42858 3142 aa27.18■■□□□ 1.94
CCDC9-204ENST00000599398 RNF113AO15541 343 aaKnown RBP27.18■■□□□ 1.94
CCDC9-204ENST00000599398 SHMT1P34896 483 aa27.18■■□□□ 1.94
CCDC9-204ENST00000599398 PABPC4Q13310 644 aaKnown RBP eCLIP27.18■■□□□ 1.94
CCDC9-204ENST00000599398 RAB3GAP1Q15042 981 aa27.18■■□□□ 1.94
CCDC9-204ENST00000599398 SH3D19Q5HYK7 790 aa27.18■■□□□ 1.94
CCDC9-204ENST00000599398 AMOTL1Q8IY63 956 aa27.18■■□□□ 1.94
CCDC9-204ENST00000599398 CABP5Q9NP86 173 aa27.18■■□□□ 1.94
CCDC9-204ENST00000599398 USP17L10C9JJH3 530 aa27.17■■□□□ 1.94
CCDC9-204ENST00000599398 ZFYP08048 801 aaPredicted RBP27.17■■□□□ 1.94
CCDC9-204ENST00000599398 BCRP11274 1271 aa27.17■■□□□ 1.94
CCDC9-204ENST00000599398 GABPAQ06546 454 aa27.17■■□□□ 1.94
CCDC9-204ENST00000599398 LRRFIP1Q32MZ4 808 aaKnown RBP27.17■■□□□ 1.94
CCDC9-204ENST00000599398 APPBP2Q92624 585 aa27.17■■□□□ 1.94
CCDC9-204ENST00000599398 MYH8P13535 1937 aa27.16■■□□□ 1.94
CCDC9-204ENST00000599398 C19orf81C9J6K1 198 aa27.16■■□□□ 1.94
CCDC9-204ENST00000599398 OSBPP22059 807 aa27.16■■□□□ 1.94
CCDC9-204ENST00000599398 PSMC4P43686 418 aa27.16■■□□□ 1.94
CCDC9-204ENST00000599398 FSD1Q9BTV5 496 aa27.16■■□□□ 1.94
CCDC9-204ENST00000599398 MPHOSPH10O00566 681 aaKnown RBP27.15■■□□□ 1.94
CCDC9-204ENST00000599398 FMNL1O95466 1100 aaPredicted RBP27.15■■□□□ 1.94
CCDC9-204ENST00000599398 OSBP2Q969R2 916 aa27.15■■□□□ 1.94
CCDC9-204ENST00000599398 DYNLL2Q96FJ2 89 aa27.15■■□□□ 1.94
CCDC9-204ENST00000599398 FEZ1Q99689 392 aa27.15■■□□□ 1.94
CCDC9-204ENST00000599398 SALL3Q9BXA9 1300 aa27.15■■□□□ 1.94
CCDC9-204ENST00000599398 CYP2D7A0A087X1C5 515 aa27.14■■□□□ 1.94
CCDC9-204ENST00000599398 USP17L12C9JPN9 530 aa27.14■■□□□ 1.94
CCDC9-204ENST00000599398 USP17L21D6R901 530 aa27.14■■□□□ 1.94
CCDC9-204ENST00000599398 GNRH1P01148 92 aa27.14■■□□□ 1.94
CCDC9-204ENST00000599398 B4GALNT3Q6L9W6 998 aa27.14■■□□□ 1.94
CCDC9-204ENST00000599398 SLC44A5Q8NCS7 719 aa27.14■■□□□ 1.94
CCDC9-204ENST00000599398 STRBPQ96SI9 672 aaKnown RBP27.14■■□□□ 1.94
CCDC9-204ENST00000599398 SWAP70Q9UH65 585 aa27.14■■□□□ 1.94
CCDC9-204ENST00000599398 PTCH2Q9Y6C5 1203 aa27.14■■□□□ 1.94
CCDC9-204ENST00000599398 CTGFP29279 349 aa27.13■■□□□ 1.93
CCDC9-204ENST00000599398 ZYXQ15942 572 aaKnown RBP27.13■■□□□ 1.93
CCDC9-204ENST00000599398 C12orf60Q5U649 245 aa27.13■■□□□ 1.93
CCDC9-204ENST00000599398 TRIM47Q96LD4 638 aa27.13■■□□□ 1.93
CCDC9-204ENST00000599398 LNPKQ9C0E8 428 aa27.13■■□□□ 1.93
CCDC9-204ENST00000599398 ASCC2Q9H1I8 757 aaPredicted RBP27.13■■□□□ 1.93
CCDC9-204ENST00000599398 CENPFP49454 3210 aa27.12■■□□□ 1.93
CCDC9-204ENST00000599398 IRX3P78415 501 aaPredicted RBP27.12■■□□□ 1.93
CCDC9-204ENST00000599398 USP17L2Q6R6M4 530 aa27.12■■□□□ 1.93
CCDC9-204ENST00000599398 ANKRD13CQ8N6S4 541 aa27.12■■□□□ 1.93
CCDC9-204ENST00000599398 MGAMO43451 1857 aa27.12■■□□□ 1.93
CCDC9-204ENST00000599398 M0R2C6 588 aa27.11■■□□□ 1.93
CCDC9-204ENST00000599398 GPAA1O43292 621 aa27.11■■□□□ 1.93
CCDC9-204ENST00000599398 IGHDP01880 384 aa27.11■■□□□ 1.93
CCDC9-204ENST00000599398 HOXD10P28358 340 aa27.11■■□□□ 1.93
CCDC9-204ENST00000599398 PDE1AP54750 535 aa27.11■■□□□ 1.93
CCDC9-204ENST00000599398 FCGRTP55899 365 aa27.11■■□□□ 1.93
CCDC9-204ENST00000599398 SMC5Q8IY18 1101 aa27.11■■□□□ 1.93
CCDC9-204ENST00000599398 RGS19P49795 217 aa27.1■■□□□ 1.93
CCDC9-204ENST00000599398 SEPT2Q15019 361 aa27.1■■□□□ 1.93
CCDC9-204ENST00000599398 SLC9C1Q4G0N8 1177 aa27.1■■□□□ 1.93
CCDC9-204ENST00000599398 CTR9Q6PD62 1173 aa27.1■■□□□ 1.93
CCDC9-204ENST00000599398 EMILIN3Q9NT22 766 aa27.1■■□□□ 1.93
CCDC9-204ENST00000599398 ARPP21Q9UBL0 812 aaPredicted RBP27.1■■□□□ 1.93
CCDC9-204ENST00000599398 STAP2Q9UGK3 403 aa27.1■■□□□ 1.93
CCDC9-204ENST00000599398 TAOK2Q9UL54 1235 aa27.1■■□□□ 1.93
CCDC9-204ENST00000599398 SMIM22K7EJ46 135 aa27.09■■□□□ 1.93
CCDC9-204ENST00000599398 GUCY1A2P33402 732 aa27.09■■□□□ 1.93
CCDC9-204ENST00000599398 GCLCP48506 637 aaPredicted RBP27.09■■□□□ 1.93
CCDC9-204ENST00000599398 PRMT2P55345 433 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms