RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 MAST2Q6P0Q8 1798 aa12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 XRCC5P13010 732 aaKnown RBP12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 TRIM27P14373 513 aa12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 CACNB2Q08289 660 aaPredicted RBP12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 ZNF697Q5TEC3 545 aa12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 SH3RF3Q8TEJ3 882 aaPredicted RBP12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 SOCS4Q8WXH5 440 aa12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 CDX2Q99626 313 aaPredicted RBP12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 NUDT12Q9BQG2 462 aa12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 TXNRD2Q9NNW7 524 aa12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 AKAP2Q9Y2D5 859 aa12.01□□□□□ -0.49
NOTCH3-202ENST00000595045 MAP4K4O95819 1239 aaPredicted RBP12□□□□□ -0.49
NOTCH3-202ENST00000595045 ZKSCAN1P17029 563 aaPredicted RBP12□□□□□ -0.49
NOTCH3-202ENST00000595045 CCND3P30281 292 aaPredicted RBP12□□□□□ -0.49
NOTCH3-202ENST00000595045 SLF2Q8IX21 1173 aa12□□□□□ -0.49
NOTCH3-202ENST00000595045 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
NOTCH3-202ENST00000595045 MAFAQ8NHW3 353 aaPredicted RBP12□□□□□ -0.49
NOTCH3-202ENST00000595045 LBHD1Q9BQE6 289 aaPredicted RBP12□□□□□ -0.49
NOTCH3-202ENST00000595045 WDR18Q9BV38 432 aa12□□□□□ -0.49
NOTCH3-202ENST00000595045 TBC1D2Q9BYX2 928 aa12□□□□□ -0.49
NOTCH3-202ENST00000595045 MYO9BQ13459 2157 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 USP17L5A8MUK1 530 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 BCAR3O75815 825 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 GNAI3P08754 354 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 PPP4CP60510 307 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 IRX3P78415 501 aaPredicted RBP11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 POLA2Q14181 598 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 CCL14Q16627 93 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 USP6NLQ92738 828 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 NEUROD6Q96NK8 337 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 P2RX7Q99572 595 aaKnown RBP11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 HDAC5Q9UQL6 1122 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 LTBP2Q14767 1821 aa11.99□□□□□ -0.49
NOTCH3-202ENST00000595045 CYP2E1P05181 493 aaPredicted RBP11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 HOXA7P31268 230 aaPredicted RBP11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 PDE3AQ14432 1141 aa11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 Q3C1V9 767 aa11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 GPRC5AQ8NFJ5 357 aa11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 SENP6Q9GZR1 1112 aaPredicted RBP11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 SEMA6BQ9H3T3 888 aa11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 SNRKQ9NRH2 765 aa11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 RAI14Q9P0K7 980 aa11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 RBPJLQ9UBG7 517 aa11.98□□□□□ -0.49
NOTCH3-202ENST00000595045 LDHCP07864 332 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 MAPK4P31152 587 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 RGS2P41220 211 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 BACE1P56817 501 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 HERVK_113P62684 666 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 GSTO1P78417 241 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 MTMR2Q13614 643 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 MORN1Q5T089 497 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 TEX11Q8IYF3 940 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 MYLIPQ8WY64 445 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 PORCNQ9H237 461 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 PIH1D3Q9NQM4 214 aaKnown RBP11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 AATFQ9NY61 560 aaKnown RBP eCLIP11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 PI4KBQ9UBF8 816 aa11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 HERC5Q9UII4 1024 aaKnown RBP11.97□□□□□ -0.49
NOTCH3-202ENST00000595045 FLT1P17948 1338 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 CHD9Q3L8U1 2897 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 GNAI2P04899 355 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 ERVK-9P63128 1117 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 ERVK-24P63145 666 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 SHHQ15465 462 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 ATF7IPQ6VMQ6 1270 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 GPR142Q7Z601 462 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 SSH3Q8TE77 659 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 APBA2Q99767 749 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 TTYH1Q9H313 450 aaPredicted RBP11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 AS3MTQ9HBK9 375 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 GPR108Q9NPR9 543 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 PALD1Q9ULE6 856 aa11.96□□□□□ -0.49
NOTCH3-202ENST00000595045 RLFQ13129 1914 aa11.96□□□□□ -0.5
NOTCH3-202ENST00000595045 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 CNMDO75829 334 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 IGHA2P01877 340 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 UQCRFS1P1P0C7P4 283 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 RTP1P59025 263 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 TNNI3KQ59H18 835 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 C9orf50Q5SZB4 431 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 MAPKAPK5Q8IW41 473 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 CCAR1Q8IX12 1150 aaKnown RBP11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 ZNF512BQ96KM6 892 aaPredicted RBP11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 TMOD4Q9NZQ9 345 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 LRP2BPQ9P2M1 347 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 PRKAG2Q9UGJ0 569 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 FPGT-TNNI3KV9GXZ4 949 aa11.95□□□□□ -0.5
NOTCH3-202ENST00000595045 GDF11O95390 407 aa11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 COL9A1P20849 921 aa11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 ZAP70P43403 619 aa11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 DYNLL1P63167 89 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms