RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 LCORLQ8N3X6 602 aa21.38■■□□□ 1.01
SHKBP1-204ENST00000594862 KBTBD3Q8NAB2 608 aa21.38■■□□□ 1.01
SHKBP1-204ENST00000594862 MCM9Q9NXL9 1143 aa21.38■■□□□ 1.01
SHKBP1-204ENST00000594862 ZBTB21Q9ULJ3 1066 aa21.38■■□□□ 1.01
SHKBP1-204ENST00000594862 PTPN22Q9Y2R2 807 aa21.38■■□□□ 1.01
SHKBP1-204ENST00000594862 SH3D19Q5HYK7 790 aa21.37■■□□□ 1.01
SHKBP1-204ENST00000594862 SMCR8Q8TEV9 937 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-204ENST00000594862 ARMT1Q9H993 441 aa21.37■■□□□ 1.01
SHKBP1-204ENST00000594862 DCP1AQ9NPI6 582 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-204ENST00000594862 C19orf81C9J6K1 198 aa21.36■■□□□ 1.01
SHKBP1-204ENST00000594862 MX1P20591 662 aa21.36■■□□□ 1.01
SHKBP1-204ENST00000594862 SOX10P56693 466 aa21.36■■□□□ 1.01
SHKBP1-204ENST00000594862 RRP1BQ14684 758 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-204ENST00000594862 TMOD4Q9NZQ9 345 aa21.36■■□□□ 1.01
SHKBP1-204ENST00000594862 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-204ENST00000594862 BACE1P56817 501 aa21.35■■□□□ 1.01
SHKBP1-204ENST00000594862 SLC4A8Q2Y0W8 1093 aa21.35■■□□□ 1.01
SHKBP1-204ENST00000594862 CCDC84Q86UT8 332 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-204ENST00000594862 SDR42E1Q8WUS8 393 aa21.35■■□□□ 1.01
SHKBP1-204ENST00000594862 RWDD1Q9H446 243 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-204ENST00000594862 CABP5Q9NP86 173 aa21.35■■□□□ 1.01
SHKBP1-204ENST00000594862 SWAP70Q9UH65 585 aa21.35■■□□□ 1.01
SHKBP1-204ENST00000594862 CPA4Q9UI42 421 aa21.35■■□□□ 1.01
SHKBP1-204ENST00000594862 USP17L10C9JJH3 530 aa21.34■■□□□ 1.01
SHKBP1-204ENST00000594862 GDF11O95390 407 aa21.34■■□□□ 1.01
SHKBP1-204ENST00000594862 BCRP11274 1271 aa21.34■■□□□ 1.01
SHKBP1-204ENST00000594862 OSBPP22059 807 aa21.34■■□□□ 1.01
SHKBP1-204ENST00000594862 HOXD10P28358 340 aa21.34■■□□□ 1.01
SHKBP1-204ENST00000594862 HMGCS2P54868 508 aa21.34■■□□□ 1.01
SHKBP1-204ENST00000594862 CERKLQ49MI3 558 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-204ENST00000594862 APPBP2Q92624 585 aa21.34■■□□□ 1.01
SHKBP1-204ENST00000594862 CYP2C8P10632 490 aa21.33■■□□□ 1.01
SHKBP1-204ENST00000594862 GCLCP48506 637 aaPredicted RBP21.33■■□□□ 1.01
SHKBP1-204ENST00000594862 MTMR2Q13614 643 aa21.33■■□□□ 1.01
SHKBP1-204ENST00000594862 ABCB5Q2M3G0 1257 aa21.33■■□□□ 1.01
SHKBP1-204ENST00000594862 ANKRD45Q5TZF3 282 aa21.33■■□□□ 1.01
SHKBP1-204ENST00000594862 RNF113AO15541 343 aaKnown RBP21.32■■□□□ 1
SHKBP1-204ENST00000594862 GH2P01242 217 aa21.32■■□□□ 1
SHKBP1-204ENST00000594862 PLCD1P51178 756 aa21.32■■□□□ 1
SHKBP1-204ENST00000594862 GABPAQ06546 454 aa21.32■■□□□ 1
SHKBP1-204ENST00000594862 PI4K2BQ8TCG2 481 aa21.32■■□□□ 1
SHKBP1-204ENST00000594862 SLC4A4Q9Y6R1 1079 aa21.32■■□□□ 1
SHKBP1-204ENST00000594862 MYH8P13535 1937 aa21.31■■□□□ 1
SHKBP1-204ENST00000594862 GNAT2P19087 354 aa21.31■■□□□ 1
SHKBP1-204ENST00000594862 SHMT1P34896 483 aa21.31■■□□□ 1
SHKBP1-204ENST00000594862 USP14P54578 494 aa21.31■■□□□ 1
SHKBP1-204ENST00000594862 FCGRTP55899 365 aa21.31■■□□□ 1
SHKBP1-204ENST00000594862 TREML2Q5T2D2 321 aa21.31■■□□□ 1
SHKBP1-204ENST00000594862 TSHZ3Q63HK5 1081 aa21.31■■□□□ 1
SHKBP1-204ENST00000594862 GIMAP6Q6P9H5 292 aa21.31■■□□□ 1
SHKBP1-204ENST00000594862 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
SHKBP1-204ENST00000594862 PSMC4P43686 418 aa21.3■■□□□ 1
SHKBP1-204ENST00000594862 FAM110CQ1W6H9 321 aa21.3■■□□□ 1
SHKBP1-204ENST00000594862 USP17L2Q6R6M4 530 aa21.3■■□□□ 1
SHKBP1-204ENST00000594862 NBPF11Q86T75 865 aa21.3■■□□□ 1
SHKBP1-204ENST00000594862 GTF3C2Q8WUA4 911 aaPredicted RBP21.3■■□□□ 1
SHKBP1-204ENST00000594862 ARMC5Q96C12 935 aa21.3■■□□□ 1
SHKBP1-204ENST00000594862 FEZ1Q99689 392 aa21.3■■□□□ 1
SHKBP1-204ENST00000594862 PUS7LQ9H0K6 701 aaKnown RBP21.3■■□□□ 1
SHKBP1-204ENST00000594862 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
SHKBP1-204ENST00000594862 FMNL1O95466 1100 aaPredicted RBP21.29■■□□□ 1
SHKBP1-204ENST00000594862 HOXA7P31268 230 aaPredicted RBP21.29■■□□□ 1
SHKBP1-204ENST00000594862 IRX3P78415 501 aaPredicted RBP21.29■■□□□ 1
SHKBP1-204ENST00000594862 JAG1P78504 1218 aa21.29■■□□□ 1
SHKBP1-204ENST00000594862 RAB3GAP1Q15042 981 aa21.29■■□□□ 1
SHKBP1-204ENST00000594862 TICAM2Q86XR7 235 aa21.29■■□□□ 1
SHKBP1-204ENST00000594862 C12orf42Q96LP6 360 aa21.29■■□□□ 1
SHKBP1-204ENST00000594862 FSD1Q9BTV5 496 aa21.29■■□□□ 1
SHKBP1-204ENST00000594862 STAP2Q9UGK3 403 aa21.29■■□□□ 1
SHKBP1-204ENST00000594862 BAZ2AQ9UIF9 1905 aaKnown RBP21.29■■□□□ 1
SHKBP1-204ENST00000594862 CENPFP49454 3210 aa21.29■■□□□ 1
SHKBP1-204ENST00000594862 PRKAB2O43741 272 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 SLFNL1Q499Z3 407 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 SLC9C1Q4G0N8 1177 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 C12orf60Q5U649 245 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 TMEM179Q6ZVK1 233 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 SMC5Q8IY18 1101 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 CCDC17Q96LX7 622 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 STRBPQ96SI9 672 aaKnown RBP21.28■■□□□ 1
SHKBP1-204ENST00000594862 ARHGAP39Q9C0H5 1083 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 KIAA1683Q9H0B3 1180 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 SRRDQ9UH36 339 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 PTCH2Q9Y6C5 1203 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 MGAMO43451 1857 aa21.28■■□□□ 1
SHKBP1-204ENST00000594862 RBBP6Q7Z6E9 1792 aaKnown RBP21.28■■□□□ 1
SHKBP1-204ENST00000594862 HTTP42858 3142 aa21.27■■□□□ 1
SHKBP1-204ENST00000594862 OTUD7AQ8TE49 926 aaPredicted RBP21.27■■□□□ 1
SHKBP1-204ENST00000594862 TRIM47Q96LD4 638 aa21.27■■□□□ 1
SHKBP1-204ENST00000594862 ASCC2Q9H1I8 757 aaPredicted RBP21.27■■□□□ 1
SHKBP1-204ENST00000594862 MKI67P46013 3256 aaKnown RBP21.27■■□□□ 1
SHKBP1-204ENST00000594862 ZSWIM8A7E2V4 1837 aa21.27■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L12C9JPN9 530 aa21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 USP17L21D6R901 530 aa21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 MPHOSPH10O00566 681 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 CAP1Q01518 475 aa21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 C16orf86Q6ZW13 317 aa21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 EXOC6Q8TAG9 804 aa21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 EVI5LQ96CN4 794 aa21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 SH2D4AQ9H788 454 aa21.26■□□□□ 0.99
SHKBP1-204ENST00000594862 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms