RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 GDF11O95390 407 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 CYP2E1P05181 493 aaPredicted RBP18.02■□□□□ 0.48
PNKP-202ENST00000593706 HLA-DOAP06340 250 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 BACE1P56817 501 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 NECAB2Q7Z6G3 386 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 ADGRA1Q86SQ6 560 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 PAWRQ96IZ0 340 aaKnown RBP18.02■□□□□ 0.48
PNKP-202ENST00000593706 WDR18Q9BV38 432 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 CRISPLD2Q9H0B8 497 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 C1orf115Q9H7X2 142 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 SAP30BPQ9UHR5 308 aaKnown RBP18.02■□□□□ 0.48
PNKP-202ENST00000593706 PALD1Q9ULE6 856 aa18.02■□□□□ 0.48
PNKP-202ENST00000593706 PPP4CP60510 307 aa18.01■□□□□ 0.47
PNKP-202ENST00000593706 POLA2Q14181 598 aa18.01■□□□□ 0.47
PNKP-202ENST00000593706 SSH3Q8TE77 659 aa18.01■□□□□ 0.47
PNKP-202ENST00000593706 DIS3LQ8TF46 1054 aaKnown RBP18.01■□□□□ 0.47
PNKP-202ENST00000593706 DNAJC18Q9H819 358 aa18.01■□□□□ 0.47
PNKP-202ENST00000593706 HMX1Q9NP08 348 aaPredicted RBP18.01■□□□□ 0.47
PNKP-202ENST00000593706 MORF4L1Q9UBU8 362 aa18.01■□□□□ 0.47
PNKP-202ENST00000593706 ZBTB21Q9ULJ3 1066 aa18.01■□□□□ 0.47
PNKP-202ENST00000593706 USP17L10C9JJH3 530 aa18■□□□□ 0.47
PNKP-202ENST00000593706 ZAP70P43403 619 aa18■□□□□ 0.47
PNKP-202ENST00000593706 HERVK_113P62684 666 aa18■□□□□ 0.47
PNKP-202ENST00000593706 FOXP4Q8IVH2 680 aaPredicted RBP18■□□□□ 0.47
PNKP-202ENST00000593706 ITPRIPQ8IWB1 547 aa18■□□□□ 0.47
PNKP-202ENST00000593706 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
PNKP-202ENST00000593706 ANKLE1Q8NAG6 615 aa18■□□□□ 0.47
PNKP-202ENST00000593706 PRO3102Q9H379 93 aa18■□□□□ 0.47
PNKP-202ENST00000593706 RPTORQ8N122 1335 aa17.99■□□□□ 0.47
PNKP-202ENST00000593706 C19orf81C9J6K1 198 aa17.99■□□□□ 0.47
PNKP-202ENST00000593706 IDH1O75874 414 aaKnown RBP17.99■□□□□ 0.47
PNKP-202ENST00000593706 CYP7A1P22680 504 aa17.99■□□□□ 0.47
PNKP-202ENST00000593706 ATP8B2P98198 1209 aa17.99■□□□□ 0.47
PNKP-202ENST00000593706 PDE3AQ14432 1141 aa17.99■□□□□ 0.47
PNKP-202ENST00000593706 SHROOM1Q2M3G4 852 aaPredicted RBP17.99■□□□□ 0.47
PNKP-202ENST00000593706 SOCS4Q8WXH5 440 aa17.99■□□□□ 0.47
PNKP-202ENST00000593706 ZNF512BQ96KM6 892 aaPredicted RBP17.99■□□□□ 0.47
PNKP-202ENST00000593706 PIH1D3Q9NQM4 214 aaKnown RBP17.99■□□□□ 0.47
PNKP-202ENST00000593706 GINM1Q9NU53 330 aa17.99■□□□□ 0.47
PNKP-202ENST00000593706 GJD2Q9UKL4 321 aa17.99■□□□□ 0.47
PNKP-202ENST00000593706 BAZ2AQ9UIF9 1905 aaKnown RBP17.99■□□□□ 0.47
PNKP-202ENST00000593706 LAMA2P24043 3122 aaKnown RBP17.98■□□□□ 0.47
PNKP-202ENST00000593706 CYP2B6P20813 491 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 HOXA7P31268 230 aaPredicted RBP17.98■□□□□ 0.47
PNKP-202ENST00000593706 DYNLL1P63167 89 aaKnown RBP17.98■□□□□ 0.47
PNKP-202ENST00000593706 JAG1P78504 1218 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 TRIM32Q13049 653 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 METTL16Q86W50 562 aaKnown RBP17.98■□□□□ 0.47
PNKP-202ENST00000593706 C7orf61Q8IZ16 206 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 GPRC5AQ8NFJ5 357 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 TRIB2Q92519 343 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 P2RX7Q99572 595 aaKnown RBP17.98■□□□□ 0.47
PNKP-202ENST00000593706 FEZ1Q99689 392 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 PAGR1Q9BTK6 254 aa17.98■□□□□ 0.47
PNKP-202ENST00000593706 CWC22Q9HCG8 908 aaKnown RBP17.98■□□□□ 0.47
PNKP-202ENST00000593706 TLR7Q9NYK1 1049 aaKnown RBP17.98■□□□□ 0.47
PNKP-202ENST00000593706 DBNLQ9UJU6 430 aaKnown RBP17.98■□□□□ 0.47
PNKP-202ENST00000593706 A0A1W2PPC1 479 aa17.97■□□□□ 0.47
PNKP-202ENST00000593706 PEX10O60683 326 aa17.97■□□□□ 0.47
PNKP-202ENST00000593706 IGSF3O75054 1194 aa17.97■□□□□ 0.47
PNKP-202ENST00000593706 USP5P45974 858 aa17.97■□□□□ 0.47
PNKP-202ENST00000593706 MIGA1Q8NAN2 632 aa17.97■□□□□ 0.47
PNKP-202ENST00000593706 CCDC8Q9H0W5 538 aaPredicted RBP17.97■□□□□ 0.47
PNKP-202ENST00000593706 PRKAR2AP13861 404 aaKnown RBP17.96■□□□□ 0.47
PNKP-202ENST00000593706 ZKSCAN1P17029 563 aaPredicted RBP17.96■□□□□ 0.47
PNKP-202ENST00000593706 MAPK4P31152 587 aa17.96■□□□□ 0.47
PNKP-202ENST00000593706 ERVK-9P63128 1117 aa17.96■□□□□ 0.47
PNKP-202ENST00000593706 ERVK-24P63145 666 aa17.96■□□□□ 0.47
PNKP-202ENST00000593706 ZYXQ15942 572 aaKnown RBP17.96■□□□□ 0.47
PNKP-202ENST00000593706 CERS3Q8IU89 383 aa17.96■□□□□ 0.47
PNKP-202ENST00000593706 GTF3C2Q8WUA4 911 aaPredicted RBP17.96■□□□□ 0.47
PNKP-202ENST00000593706 NBPF3Q9H094 633 aa17.96■□□□□ 0.47
PNKP-202ENST00000593706 TXNRD2Q9NNW7 524 aa17.96■□□□□ 0.47
PNKP-202ENST00000593706 STAP2Q9UGK3 403 aa17.96■□□□□ 0.47
PNKP-202ENST00000593706 PARP14Q460N5 1801 aa17.95■□□□□ 0.46
PNKP-202ENST00000593706 GH2P01242 217 aa17.95■□□□□ 0.46
PNKP-202ENST00000593706 USP17L2Q6R6M4 530 aa17.95■□□□□ 0.46
PNKP-202ENST00000593706 MAGEB6Q8N7X4 407 aa17.95■□□□□ 0.46
PNKP-202ENST00000593706 PANK1Q8TE04 598 aa17.95■□□□□ 0.46
PNKP-202ENST00000593706 C11orf49Q9H6J7 331 aa17.95■□□□□ 0.46
PNKP-202ENST00000593706 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
PNKP-202ENST00000593706 ZNFX1Q9P2E3 1918 aaKnown RBP17.94■□□□□ 0.46
PNKP-202ENST00000593706 A0A0C4DFX4 3053 aa17.94■□□□□ 0.46
PNKP-202ENST00000593706 COL11A1P12107 1806 aaPredicted RBP17.94■□□□□ 0.46
PNKP-202ENST00000593706 RGS2P41220 211 aa17.94■□□□□ 0.46
PNKP-202ENST00000593706 MAP3K12Q12852 859 aa17.94■□□□□ 0.46
PNKP-202ENST00000593706 TRMT44Q8IYL2 757 aaKnown RBP17.94■□□□□ 0.46
PNKP-202ENST00000593706 ZMYND8Q9ULU4 1186 aaPredicted RBP17.94■□□□□ 0.46
PNKP-202ENST00000593706 NDUFB9Q9Y6M9 179 aa17.94■□□□□ 0.46
PNKP-202ENST00000593706 A0A0G2JMZ2 1700 aa17.94■□□□□ 0.46
PNKP-202ENST00000593706 XRCC5P13010 732 aaKnown RBP17.93■□□□□ 0.46
PNKP-202ENST00000593706 RAB3GAP1Q15042 981 aa17.93■□□□□ 0.46
PNKP-202ENST00000593706 MAP3K21Q5TCX8 1036 aa17.93■□□□□ 0.46
PNKP-202ENST00000593706 GPR142Q7Z601 462 aa17.93■□□□□ 0.46
PNKP-202ENST00000593706 EAF2Q96CJ1 260 aaPredicted RBP17.93■□□□□ 0.46
PNKP-202ENST00000593706 PORCNQ9H237 461 aa17.93■□□□□ 0.46
PNKP-202ENST00000593706 EMILIN3Q9NT22 766 aa17.93■□□□□ 0.46
PNKP-202ENST00000593706 RBPJLQ9UBG7 517 aa17.93■□□□□ 0.46
PNKP-202ENST00000593706 SERPINB13Q9UIV8 391 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms