RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-213ENST00000593267 SEC23AQ15436 765 aa13.56□□□□□ -0.24
CACNA1A-213ENST00000593267 SAMD7Q7Z3H4 446 aa13.56□□□□□ -0.24
CACNA1A-213ENST00000593267 FAM83AQ86UY5 434 aa13.56□□□□□ -0.24
CACNA1A-213ENST00000593267 FAM151AQ8WW52 585 aa13.56□□□□□ -0.24
CACNA1A-213ENST00000593267 ZNF274Q96GC6 653 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-213ENST00000593267 SWAP70Q9UH65 585 aa13.56□□□□□ -0.24
CACNA1A-213ENST00000593267 TSPY2A6NKD2 308 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 POTECB2RU33 542 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 H7C1D1 291 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 IFIT3O14879 490 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 PFKFB2O60825 505 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 DDNO94850 711 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 TMEM67Q5HYA8 995 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 METTL16Q86W50 562 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 GTF3C6Q969F1 213 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 ZKSCAN3Q9BRR0 538 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 DNAJC18Q9H819 358 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 MKNK2Q9HBH9 465 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 TCP11L1Q9NUJ3 509 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 PI4KBQ9UBF8 816 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 TNKSO95271 1327 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 NID2Q14112 1375 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 SCN4AP35499 1836 aa13.55□□□□□ -0.24
CACNA1A-213ENST00000593267 KLF18A0A0U1RQI7 1052 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 ERICH2A1L162 156 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 PDIA3P30101 505 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 SHMT1P34896 483 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 TFAP4Q01664 338 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 WTAPQ15007 396 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 TBC1D10BQ4KMP7 808 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 FAM47AQ5JRC9 791 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 ZNF444Q8N0Y2 327 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 TMTC2Q8N394 836 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 ENAHQ8N8S7 591 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 L3MBTL3Q96JM7 780 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 VEZTQ9HBM0 779 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 SENP2Q9HC62 589 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 PGAP2Q9UHJ9 254 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 BRPF3Q9ULD4 1205 aa13.54□□□□□ -0.24
CACNA1A-213ENST00000593267 TSPY3P0CV98 308 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 TSPY8P0CW00 308 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 EPS15P42566 896 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 TNNI2P48788 182 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 RCAN1P53805 252 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 TNFAIP1Q13829 316 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 APOA5Q6Q788 366 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 FOXP4Q8IVH2 680 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 NECAB1Q8N987 351 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 TRPM4Q8TD43 1214 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 CSRNP1Q96S65 589 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 CWC22Q9HCG8 908 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
CACNA1A-213ENST00000593267 CCDC69A6NI79 296 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 GOLGA8BA8MQT2 603 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 LMOD1P29536 600 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 SCRN1Q12765 414 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 STK3Q13188 491 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 RCSD1Q6JBY9 416 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 TATDN1Q6P1N9 297 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 CRACR2BQ8N4Y2 399 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 IL17RBQ9NRM6 502 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 HACL1Q9UJ83 578 aa13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 ASTN2O75129 1339 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-213ENST00000593267 ATAD5Q96QE3 1844 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 IQCA1LA6NCM1 817 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 NMT2O60551 498 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 NOVP48745 357 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 NFXL1Q6ZNB6 911 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 DGKHQ86XP1 1220 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 TMEM39BQ9GZU3 492 aa13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 ADARB2Q9NS39 739 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-213ENST00000593267 PITPNM2Q9BZ72 1349 aa13.5□□□□□ -0.25
CACNA1A-213ENST00000593267 ZBTB43O43298 467 aa13.5□□□□□ -0.25
CACNA1A-213ENST00000593267 TBC1D12O60347 775 aa13.5□□□□□ -0.25
CACNA1A-213ENST00000593267 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
CACNA1A-213ENST00000593267 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms