RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CDK8P49336 464 aa17.79■□□□□ 0.44
DDX39A-221ENST00000593026 PPATQ06203 517 aa17.79■□□□□ 0.44
DDX39A-221ENST00000593026 PPARAQ07869 468 aa17.79■□□□□ 0.44
DDX39A-221ENST00000593026 CERKLQ49MI3 558 aaPredicted RBP17.79■□□□□ 0.44
DDX39A-221ENST00000593026 DSCC1Q9BVC3 393 aa17.79■□□□□ 0.44
DDX39A-221ENST00000593026 MYH8P13535 1937 aa17.78■□□□□ 0.44
DDX39A-221ENST00000593026 SLC3A2P08195 630 aaKnown RBP17.78■□□□□ 0.44
DDX39A-221ENST00000593026 ASNSP08243 561 aa17.78■□□□□ 0.44
DDX39A-221ENST00000593026 KIF23Q02241 960 aaPredicted RBP17.78■□□□□ 0.44
DDX39A-221ENST00000593026 PPIL2Q13356 520 aa17.78■□□□□ 0.44
DDX39A-221ENST00000593026 STK11IPQ8N1F8 1099 aa17.78■□□□□ 0.44
DDX39A-221ENST00000593026 ZIC5Q96T25 663 aa17.78■□□□□ 0.44
DDX39A-221ENST00000593026 ESYT1Q9BSJ8 1104 aa17.78■□□□□ 0.44
DDX39A-221ENST00000593026 GINM1Q9NU53 330 aa17.78■□□□□ 0.44
DDX39A-221ENST00000593026 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.78■□□□□ 0.44
DDX39A-221ENST00000593026 ZBTB21Q9ULJ3 1066 aa17.78■□□□□ 0.44
DDX39A-221ENST00000593026 GH2P01242 217 aa17.77■□□□□ 0.44
DDX39A-221ENST00000593026 JAG1P78504 1218 aa17.77■□□□□ 0.44
DDX39A-221ENST00000593026 ABCB5Q2M3G0 1257 aa17.77■□□□□ 0.44
DDX39A-221ENST00000593026 MKNK2Q9HBH9 465 aa17.77■□□□□ 0.44
DDX39A-221ENST00000593026 ZNF287Q9HBT7 754 aa17.77■□□□□ 0.44
DDX39A-221ENST00000593026 CABP5Q9NP86 173 aa17.77■□□□□ 0.44
DDX39A-221ENST00000593026 GTF3C3Q9Y5Q9 886 aa17.77■□□□□ 0.44
DDX39A-221ENST00000593026 ZHX2Q9Y6X8 837 aa17.77■□□□□ 0.44
DDX39A-221ENST00000593026 MANSC4A6NHS7 340 aaPredicted RBP17.76■□□□□ 0.43
DDX39A-221ENST00000593026 USP17L5A8MUK1 530 aa17.76■□□□□ 0.43
DDX39A-221ENST00000593026 MPHOSPH10O00566 681 aaKnown RBP17.76■□□□□ 0.43
DDX39A-221ENST00000593026 IRF6O14896 467 aa17.76■□□□□ 0.43
DDX39A-221ENST00000593026 HSPA1AP0DMV8 641 aaKnown RBP17.76■□□□□ 0.43
DDX39A-221ENST00000593026 HSPA1BP0DMV9 641 aaKnown RBP17.76■□□□□ 0.43
DDX39A-221ENST00000593026 SHROOM1Q2M3G4 852 aaPredicted RBP17.76■□□□□ 0.43
DDX39A-221ENST00000593026 CCDC84Q86UT8 332 aaPredicted RBP17.76■□□□□ 0.43
DDX39A-221ENST00000593026 CCDC17Q96LX7 622 aa17.76■□□□□ 0.43
DDX39A-221ENST00000593026 CTNNA3Q9UI47 895 aa17.76■□□□□ 0.43
DDX39A-221ENST00000593026 ANAPC4Q9UJX5 808 aa17.76■□□□□ 0.43
DDX39A-221ENST00000593026 GTF2A2P52657 109 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 CTDSPL2Q05D32 466 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 PDE4BQ07343 736 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 SREBF2Q12772 1141 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 KIAA1211Q6ZU35 1233 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
DDX39A-221ENST00000593026 TBC1D2Q9BYX2 928 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 AS3MTQ9HBK9 375 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 LAMA4Q16363 1823 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 PHIPQ8WWQ0 1821 aa17.75■□□□□ 0.43
DDX39A-221ENST00000593026 ZNF213O14771 459 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 PRDM1O75626 825 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 AKR1B1P15121 316 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 RASA1P20936 1047 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 HAND2P61296 217 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
DDX39A-221ENST00000593026 PTH1RQ03431 593 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 RAB3GAP1Q15042 981 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 TMEM179Q6ZVK1 233 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 KCNH4Q9UQ05 1017 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 AFG3L2Q9Y4W6 797 aa17.74■□□□□ 0.43
DDX39A-221ENST00000593026 TRIM75PA6NK02 468 aa17.73■□□□□ 0.43
DDX39A-221ENST00000593026 CXCL11O14625 94 aa17.73■□□□□ 0.43
DDX39A-221ENST00000593026 CETPP11597 493 aa17.73■□□□□ 0.43
DDX39A-221ENST00000593026 INHBEP58166 350 aa17.73■□□□□ 0.43
DDX39A-221ENST00000593026 SEPT2Q15019 361 aa17.73■□□□□ 0.43
DDX39A-221ENST00000593026 IMMTQ16891 758 aaKnown RBP17.73■□□□□ 0.43
DDX39A-221ENST00000593026 ZNF280CQ8ND82 737 aa17.73■□□□□ 0.43
DDX39A-221ENST00000593026 MS4A4AQ96JQ5 239 aa17.73■□□□□ 0.43
DDX39A-221ENST00000593026 ANO2Q9NQ90 1003 aa17.73■□□□□ 0.43
DDX39A-221ENST00000593026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
DDX39A-221ENST00000593026 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-221ENST00000593026 CCL15-CCL14A0A0B4J2E2 113 aa17.72■□□□□ 0.43
DDX39A-221ENST00000593026 SPP2Q13103 211 aa17.72■□□□□ 0.43
DDX39A-221ENST00000593026 CCL15Q16663 113 aa17.72■□□□□ 0.43
DDX39A-221ENST00000593026 ZNF444Q8N0Y2 327 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-221ENST00000593026 WDR18Q9BV38 432 aa17.72■□□□□ 0.43
DDX39A-221ENST00000593026 GUCY1A2P33402 732 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 TM4SF4P48230 202 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 TBC1D10CQ8IV04 446 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 STAG1Q8WVM7 1258 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 BRI3BPQ8WY22 251 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 MAP4K1Q92918 833 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 BEGAINQ9BUH8 593 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 LSG1Q9H089 658 aaKnown RBP17.71■□□□□ 0.43
DDX39A-221ENST00000593026 NBPF3Q9H094 633 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-221ENST00000593026 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
DDX39A-221ENST00000593026 A0A0G2JLL6 359 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-221ENST00000593026 TESPA1A2RU30 521 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-221ENST00000593026 ORC4O43929 436 aa17.7■□□□□ 0.42
DDX39A-221ENST00000593026 PCP11498 1178 aaKnown RBP17.7■□□□□ 0.42
DDX39A-221ENST00000593026 AKNAD1Q5T1N1 836 aa17.7■□□□□ 0.42
DDX39A-221ENST00000593026 MFSD6Q6ZSS7 791 aa17.7■□□□□ 0.42
DDX39A-221ENST00000593026 PRRT2Q7Z6L0 340 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-221ENST00000593026 FEZ1Q99689 392 aa17.7■□□□□ 0.42
DDX39A-221ENST00000593026 INCENPQ9NQS7 918 aa17.7■□□□□ 0.42
DDX39A-221ENST00000593026 WBP1LQ9NX94 342 aa17.7■□□□□ 0.42
DDX39A-221ENST00000593026 TACC3Q9Y6A5 838 aa17.7■□□□□ 0.42
DDX39A-221ENST00000593026 PTPRFP10586 1907 aa17.7■□□□□ 0.42
DDX39A-221ENST00000593026 GREB1LQ9C091 1923 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-221ENST00000593026 TSPY2A6NKD2 308 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 USP17L10C9JJH3 530 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 IGF2BP3O00425 579 aaKnown RBP eCLIP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms