RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 ARHGEF25Q86VW2 580 aa14.27□□□□□ -0.12
DNMT1-228ENST00000592705 CCDC155Q8N6L0 562 aa14.27□□□□□ -0.12
DNMT1-228ENST00000592705 ZNF594Q96JF6 807 aaPredicted RBP14.27□□□□□ -0.12
DNMT1-228ENST00000592705 PLVAPQ9BX97 442 aa14.27□□□□□ -0.12
DNMT1-228ENST00000592705 PPEF1O14829 653 aaPredicted RBP14.27□□□□□ -0.13
DNMT1-228ENST00000592705 SP4Q02446 784 aa14.27□□□□□ -0.13
DNMT1-228ENST00000592705 EAF2Q96CJ1 260 aaPredicted RBP14.27□□□□□ -0.13
DNMT1-228ENST00000592705 PAGR1Q9BTK6 254 aa14.27□□□□□ -0.13
DNMT1-228ENST00000592705 SYNRGQ9UMZ2 1314 aa14.27□□□□□ -0.13
DNMT1-228ENST00000592705 CCNA1P78396 465 aa14.27□□□□□ -0.13
DNMT1-228ENST00000592705 C2orf69Q8N8R5 385 aa14.27□□□□□ -0.13
DNMT1-228ENST00000592705 GADL1Q6ZQY3 521 aa14.27□□□□□ -0.13
DNMT1-228ENST00000592705 RASAL2Q9UJF2 1139 aa14.27□□□□□ -0.13
DNMT1-228ENST00000592705 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 CCT6AP40227 531 aaKnown RBP14.26□□□□□ -0.13
DNMT1-228ENST00000592705 R3HDM1Q15032 1099 aaKnown RBP14.26□□□□□ -0.13
DNMT1-228ENST00000592705 KIAA0825Q8IV33 1275 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 LPIN2Q92539 896 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 ARMT1Q9H993 441 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 BCL2L12Q9HB09 334 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 NR1I2O75469 434 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 DHX37Q8IY37 1157 aaKnown RBP14.26□□□□□ -0.13
DNMT1-228ENST00000592705 CARD6Q9BX69 1037 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 NDUFB9Q9Y6M9 179 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 MROH5Q6ZUA9 1318 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 PTCH1Q13635 1447 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 IQGAP3Q86VI3 1631 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 VAV2P52735 878 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 POSTNQ15063 836 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 IGSF3O75054 1194 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 BBOX1O75936 387 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 IL6STP40189 918 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-228ENST00000592705 DOK7Q18PE1 504 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 MYSM1Q5VVJ2 828 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 HOOK3Q86VS8 718 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 KIAA1468Q9P260 1216 aa14.26□□□□□ -0.13
DNMT1-228ENST00000592705 CFAP65Q6ZU64 1925 aaKnown RBP14.25□□□□□ -0.13
DNMT1-228ENST00000592705 DDX12PQ92771 950 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 MRFAP1L1Q96HT8 127 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 ERBB4Q15303 1308 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 MACROD2A1Z1Q3 448 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 USP40Q9NVE5 1235 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 RNF181Q9P0P0 153 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 NFE2L3Q9Y4A8 694 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 METP08581 1390 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 DTNBO60941 627 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 TMTC1Q8IUR5 882 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 MAP4K1Q92918 833 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-228ENST00000592705 XPO4Q9C0E2 1151 aaKnown RBP14.25□□□□□ -0.13
DNMT1-228ENST00000592705 EBAG9O00559 213 aa14.25□□□□□ -0.13
DNMT1-228ENST00000592705 SPOUT1Q5T280 376 aaKnown RBP14.25□□□□□ -0.13
DNMT1-228ENST00000592705 CCDC117Q8IWD4 279 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-228ENST00000592705 KRT13P13646 458 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 FAM47CQ5HY64 1035 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 CIAPIN1Q6FI81 312 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 NSMFQ6X4W1 530 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 CPXCR1Q8N123 301 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 HAUS7Q99871 368 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 IQCA1LA6NCM1 817 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 SLC27A3Q5K4L6 730 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 SV2BQ7L1I2 683 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 VPS16Q9H269 839 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 PAK1Q13153 545 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 TTC38Q5R3I4 469 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 NAP1L4Q99733 375 aaKnown RBP14.24□□□□□ -0.13
DNMT1-228ENST00000592705 ADCY10Q96PN6 1610 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 TAF5LO75529 589 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 ZAP70P43403 619 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 FAM76AQ8TAV0 307 aa14.24□□□□□ -0.13
DNMT1-228ENST00000592705 NSRP1Q9H0G5 558 aaKnown RBP14.24□□□□□ -0.13
DNMT1-228ENST00000592705 V9GY48 417 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-228ENST00000592705 PHACTR2O75167 634 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 PARP1P09874 1014 aaKnown RBP14.23□□□□□ -0.13
DNMT1-228ENST00000592705 TBC1D8BQ0IIM8 1120 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 PHKBQ93100 1093 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 USP28Q96RU2 1077 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 NOC4LQ9BVI4 516 aaKnown RBP14.23□□□□□ -0.13
DNMT1-228ENST00000592705 STMN4Q9H169 189 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-228ENST00000592705 ASAP1Q9ULH1 1129 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 ZBTB24O43167 697 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-228ENST00000592705 CTNNA2P26232 953 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 MNAT1P51948 309 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 TNNC1P63316 161 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 ARFGAP2Q8N6H7 521 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 EDC3Q96F86 508 aaKnown RBP14.23□□□□□ -0.13
DNMT1-228ENST00000592705 NUP58Q9BVL2 599 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 CDK12Q9NYV4 1490 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-228ENST00000592705 PIK3AP1Q6ZUJ8 805 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 ATRIPQ8WXE1 791 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 GPBP1L1Q9HC44 474 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-228ENST00000592705 TET3O43151 1660 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 KCNQ3O43525 872 aa14.23□□□□□ -0.13
DNMT1-228ENST00000592705 NPR1P16066 1061 aa14.22□□□□□ -0.13
DNMT1-228ENST00000592705 PFKFB1P16118 471 aa14.22□□□□□ -0.13
DNMT1-228ENST00000592705 ARID5AQ03989 594 aa14.22□□□□□ -0.13
DNMT1-228ENST00000592705 PLIN2Q99541 437 aa14.22□□□□□ -0.13
DNMT1-228ENST00000592705 ADCY9O60503 1353 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms