RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 N4BP1O75113 896 aaKnown RBP20.45■□□□□ 0.86
SPC24-206ENST00000592540 IFNAR1P17181 557 aa20.45■□□□□ 0.86
SPC24-206ENST00000592540 TAF7LQ5H9L4 462 aa20.45■□□□□ 0.86
SPC24-206ENST00000592540 LEKR1Q6ZMV7 388 aa20.45■□□□□ 0.86
SPC24-206ENST00000592540 FOXP1Q9H334 677 aaPredicted RBP20.45■□□□□ 0.86
SPC24-206ENST00000592540 SUGCTQ9HAC7 445 aa20.45■□□□□ 0.86
SPC24-206ENST00000592540 INCENPQ9NQS7 918 aa20.45■□□□□ 0.86
SPC24-206ENST00000592540 ADD3Q9UEY8 706 aaKnown RBP20.45■□□□□ 0.86
SPC24-206ENST00000592540 RRP15Q9Y3B9 282 aaKnown RBP20.45■□□□□ 0.86
SPC24-206ENST00000592540 PCDHB6Q9Y5E3 794 aa20.45■□□□□ 0.86
SPC24-206ENST00000592540 COL18A1P39060 1754 aa20.45■□□□□ 0.86
SPC24-206ENST00000592540 MFAP3LO75121 409 aa20.44■□□□□ 0.86
SPC24-206ENST00000592540 USP49Q70CQ1 688 aa20.44■□□□□ 0.86
SPC24-206ENST00000592540 IPO4Q8TEX9 1081 aaKnown RBP20.44■□□□□ 0.86
SPC24-206ENST00000592540 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
SPC24-206ENST00000592540 CT47A1Q5JQC4 288 aaPredicted RBP20.44■□□□□ 0.86
SPC24-206ENST00000592540 SLC35F6Q8N357 371 aa20.44■□□□□ 0.86
SPC24-206ENST00000592540 UBR2Q8IWV8 1755 aa20.44■□□□□ 0.86
SPC24-206ENST00000592540 IFIT3O14879 490 aaKnown RBP20.43■□□□□ 0.86
SPC24-206ENST00000592540 UBE3CQ15386 1083 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 ISCA1Q9BUE6 129 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 PIH1D3Q9NQM4 214 aaKnown RBP20.43■□□□□ 0.86
SPC24-206ENST00000592540 FAN1Q9Y2M0 1017 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 LRP6O75581 1613 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 IVLP07476 585 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 RHOXF2BP0C7M4 288 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 CASP14P31944 242 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 RHOXF2Q9BQY4 288 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 CSRNP2Q9H175 543 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 ZSWIM5Q9P217 1185 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 RSPH14Q9UHP6 348 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 TTF2Q9UNY4 1162 aaKnown RBP20.43■□□□□ 0.86
SPC24-206ENST00000592540 ZNF532Q9HCE3 1301 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 SYNRGQ9UMZ2 1314 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 PLEKHG2Q9H7P9 1386 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 RIC1Q4ADV7 1423 aa20.43■□□□□ 0.86
SPC24-206ENST00000592540 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
SPC24-206ENST00000592540 TFRCP02786 760 aaKnown RBP20.42■□□□□ 0.86
SPC24-206ENST00000592540 CD44P16070 742 aaKnown RBP20.42■□□□□ 0.86
SPC24-206ENST00000592540 STX17P56962 302 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 VSNL1P62760 191 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 CUL4BQ13620 913 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 TTF1Q15361 905 aaPredicted RBP20.42■□□□□ 0.86
SPC24-206ENST00000592540 CDKAL1Q5VV42 579 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 WWC2Q6AWC2 1192 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 KLHL10Q6JEL2 608 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 ZBTB9Q96C00 473 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 CTAGE1Q96RT6 745 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 CDC5LQ99459 802 aaKnown RBP20.42■□□□□ 0.86
SPC24-206ENST00000592540 MST1RQ04912 1400 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 MYH6P13533 1939 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 NR5A1Q13285 461 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 IFIT5Q13325 482 aaKnown RBP20.42■□□□□ 0.86
SPC24-206ENST00000592540 CNGA4Q8IV77 575 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 CEP131Q9UPN4 1083 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 TBC1D2BQ9UPU7 963 aa20.42■□□□□ 0.86
SPC24-206ENST00000592540 WDR17Q8IZU2 1322 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 RPS6KA5O75582 802 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 FECHP22830 423 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 CASP8Q14790 479 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 WHAMMP3Q1A5X7 153 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 METTL24Q5JXM2 366 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 TRIM22Q8IYM9 498 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 ACRBPQ8NEB7 543 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 CCDC51Q96ER9 411 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 NAPGQ99747 312 aaPredicted RBP20.41■□□□□ 0.86
SPC24-206ENST00000592540 GBP3Q9H0R5 595 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 NID2Q14112 1375 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 CTAGE15A4D2H0 777 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 GYPCP04921 128 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 CTAGE8P0CG41 777 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 ATP2B1P20020 1258 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 TNNT3P45378 269 aaPredicted RBP20.41■□□□□ 0.86
SPC24-206ENST00000592540 FILIP1LQ4L180 1135 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 CTAGE6Q86UF2 777 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 CTAGE4Q8IX94 777 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 WWC3Q9ULE0 1092 aa20.41■□□□□ 0.86
SPC24-206ENST00000592540 ABL1P00519 1130 aa20.4■□□□□ 0.86
SPC24-206ENST00000592540 PDE6AP16499 860 aa20.4■□□□□ 0.86
SPC24-206ENST00000592540 FXR1P51114 621 aaKnown RBP eCLIP20.4■□□□□ 0.86
SPC24-206ENST00000592540 PIP4K2BP78356 416 aa20.4■□□□□ 0.86
SPC24-206ENST00000592540 ALX1Q15699 326 aa20.4■□□□□ 0.86
SPC24-206ENST00000592540 ZNF512BQ96KM6 892 aaPredicted RBP20.4■□□□□ 0.86
SPC24-206ENST00000592540 STRBPQ96SI9 672 aaKnown RBP20.4■□□□□ 0.86
SPC24-206ENST00000592540 STRN4Q9NRL3 753 aa20.4■□□□□ 0.86
SPC24-206ENST00000592540 SEMA3EO15041 775 aa20.39■□□□□ 0.86
SPC24-206ENST00000592540 CSF1RP07333 972 aa20.39■□□□□ 0.86
SPC24-206ENST00000592540 AFMP43652 599 aa20.39■□□□□ 0.86
SPC24-206ENST00000592540 CTDSPL2Q05D32 466 aa20.39■□□□□ 0.86
SPC24-206ENST00000592540 TCIRG1Q13488 830 aa20.39■□□□□ 0.86
SPC24-206ENST00000592540 FAM89AQ96GI7 184 aa20.39■□□□□ 0.86
SPC24-206ENST00000592540 RIPOR2Q9Y4F9 1068 aa20.39■□□□□ 0.86
SPC24-206ENST00000592540 ITIH6Q6UXX5 1313 aa20.39■□□□□ 0.85
SPC24-206ENST00000592540 A0A087X0B3 334 aa20.39■□□□□ 0.85
SPC24-206ENST00000592540 RTN1Q16799 776 aa20.39■□□□□ 0.85
SPC24-206ENST00000592540 TMTC1Q8IUR5 882 aa20.39■□□□□ 0.85
SPC24-206ENST00000592540 FAM71BQ8TC56 605 aa20.39■□□□□ 0.85
SPC24-206ENST00000592540 OXER1Q8TDS5 423 aa20.39■□□□□ 0.85
SPC24-206ENST00000592540 TACC3Q9Y6A5 838 aa20.39■□□□□ 0.85
SPC24-206ENST00000592540 TCRBV5S4A2TA0A5A2 114 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms