RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 GINM1Q9NU53 330 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 TSKSQ9UJT2 592 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 ZHX2Q9Y6X8 837 aa22.33■■□□□ 1.17
TCF3-216ENST00000592395 PTPRFP10586 1907 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 GSG1L2A8MUP6 293 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 USP17L12C9JPN9 530 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 USP17L21D6R901 530 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 IGF2BP3O00425 579 aaKnown RBP eCLIP22.32■■□□□ 1.16
TCF3-216ENST00000592395 CXCL11O14625 94 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 ASNSP08243 561 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 CYP2D6P10635 497 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 LBX1P52954 281 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 TTC22Q5TAA0 569 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 C12orf60Q5U649 245 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 BRI3BPQ8WY22 251 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 TBC1D2Q9BYX2 928 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 HELLSQ9NRZ9 838 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 ARPP21Q9UBL0 812 aaPredicted RBP22.32■■□□□ 1.16
TCF3-216ENST00000592395 AFG3L2Q9Y4W6 797 aa22.32■■□□□ 1.16
TCF3-216ENST00000592395 PATL2C9JE40 543 aaKnown RBP22.31■■□□□ 1.16
TCF3-216ENST00000592395 CTR9Q6PD62 1173 aa22.31■■□□□ 1.16
TCF3-216ENST00000592395 CCDC136Q96JN2 1154 aa22.31■■□□□ 1.16
TCF3-216ENST00000592395 PTPN18Q99952 460 aa22.31■■□□□ 1.16
TCF3-216ENST00000592395 PRDM10Q9NQV6 1147 aa22.31■■□□□ 1.16
TCF3-216ENST00000592395 GDF11O95390 407 aa22.3■■□□□ 1.16
TCF3-216ENST00000592395 APPP05067 770 aa22.3■■□□□ 1.16
TCF3-216ENST00000592395 SHMT1P34896 483 aa22.3■■□□□ 1.16
TCF3-216ENST00000592395 EVX2Q03828 476 aa22.3■■□□□ 1.16
TCF3-216ENST00000592395 CFHR5Q9BXR6 569 aa22.3■■□□□ 1.16
TCF3-216ENST00000592395 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.3■■□□□ 1.16
TCF3-216ENST00000592395 SWAP70Q9UH65 585 aa22.3■■□□□ 1.16
TCF3-216ENST00000592395 A0A0D9SFI3 127 aa22.29■■□□□ 1.16
TCF3-216ENST00000592395 USP17L5A8MUK1 530 aa22.29■■□□□ 1.16
TCF3-216ENST00000592395 SDSP20132 328 aa22.29■■□□□ 1.16
TCF3-216ENST00000592395 CERKLQ49MI3 558 aaPredicted RBP22.29■■□□□ 1.16
TCF3-216ENST00000592395 MCMDC2Q4G0Z9 681 aa22.29■■□□□ 1.16
TCF3-216ENST00000592395 SBK1Q52WX2 424 aa22.29■■□□□ 1.16
TCF3-216ENST00000592395 CCDC84Q86UT8 332 aaPredicted RBP22.29■■□□□ 1.16
TCF3-216ENST00000592395 FAM227BQ96M60 508 aa22.29■■□□□ 1.16
TCF3-216ENST00000592395 NACAP1Q9BZK3 213 aa22.29■■□□□ 1.16
TCF3-216ENST00000592395 EPB41L4AQ9HCS5 686 aaPredicted RBP22.29■■□□□ 1.16
TCF3-216ENST00000592395 ZBTB21Q9ULJ3 1066 aa22.29■■□□□ 1.16
TCF3-216ENST00000592395 CYP2D7A0A087X1C5 515 aa22.28■■□□□ 1.16
TCF3-216ENST00000592395 HIP1O00291 1037 aa22.28■■□□□ 1.16
TCF3-216ENST00000592395 GSPT1P15170 499 aaKnown RBP22.28■■□□□ 1.16
TCF3-216ENST00000592395 TDO2P48775 406 aa22.28■■□□□ 1.16
TCF3-216ENST00000592395 JAG1P78504 1218 aa22.28■■□□□ 1.16
TCF3-216ENST00000592395 NMIQ13287 307 aaPredicted RBP22.28■■□□□ 1.16
TCF3-216ENST00000592395 CCDC129Q6ZRS4 1044 aa22.28■■□□□ 1.16
TCF3-216ENST00000592395 DYNLL2Q96FJ2 89 aa22.28■■□□□ 1.16
TCF3-216ENST00000592395 AS3MTQ9HBK9 375 aa22.28■■□□□ 1.16
TCF3-216ENST00000592395 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
TCF3-216ENST00000592395 A0A0G2JLL6 359 aaPredicted RBP22.27■■□□□ 1.16
TCF3-216ENST00000592395 TRIM75PA6NK02 468 aa22.27■■□□□ 1.16
TCF3-216ENST00000592395 TBC1D8O95759 1140 aa22.27■■□□□ 1.16
TCF3-216ENST00000592395 GH2P01242 217 aa22.27■■□□□ 1.16
TCF3-216ENST00000592395 SHROOM1Q2M3G4 852 aaPredicted RBP22.27■■□□□ 1.16
TCF3-216ENST00000592395 PRRT2Q7Z6L0 340 aaPredicted RBP22.27■■□□□ 1.16
TCF3-216ENST00000592395 IFNL3Q8IZI9 196 aa22.27■■□□□ 1.16
TCF3-216ENST00000592395 FAM43AQ8N2R8 423 aa22.27■■□□□ 1.16
TCF3-216ENST00000592395 ZNF280CQ8ND82 737 aa22.27■■□□□ 1.16
TCF3-216ENST00000592395 DIAPH3Q9NSV4 1193 aa22.27■■□□□ 1.16
TCF3-216ENST00000592395 BTBD19C9JJ37 291 aa22.26■■□□□ 1.15
TCF3-216ENST00000592395 ABCB5Q2M3G0 1257 aa22.26■■□□□ 1.15
TCF3-216ENST00000592395 ERICH6BQ5W0A0 696 aa22.26■■□□□ 1.15
TCF3-216ENST00000592395 C16orf86Q6ZW13 317 aa22.26■■□□□ 1.15
TCF3-216ENST00000592395 FASTKD5Q7L8L6 764 aaKnown RBP22.26■■□□□ 1.15
TCF3-216ENST00000592395 SLC44A5Q8NCS7 719 aa22.26■■□□□ 1.15
TCF3-216ENST00000592395 WDR18Q9BV38 432 aa22.26■■□□□ 1.15
TCF3-216ENST00000592395 NAPBQ9H115 298 aa22.26■■□□□ 1.15
TCF3-216ENST00000592395 CABP5Q9NP86 173 aa22.26■■□□□ 1.15
TCF3-216ENST00000592395 ROBO3Q96MS0 1386 aa22.25■■□□□ 1.15
TCF3-216ENST00000592395 LOC285556D6RIA3 1793 aa22.25■■□□□ 1.15
TCF3-216ENST00000592395 SMIM22K7EJ46 135 aa22.25■■□□□ 1.15
TCF3-216ENST00000592395 SPP2Q13103 211 aa22.25■■□□□ 1.15
TCF3-216ENST00000592395 MOGSQ13724 837 aa22.25■■□□□ 1.15
TCF3-216ENST00000592395 NOM1Q5C9Z4 860 aaKnown RBP22.25■■□□□ 1.15
TCF3-216ENST00000592395 ANKRD23Q86SG2 305 aa22.25■■□□□ 1.15
TCF3-216ENST00000592395 MINDY4BA8MYZ0 360 aa22.24■■□□□ 1.15
TCF3-216ENST00000592395 FOXP2O15409 715 aa22.24■■□□□ 1.15
TCF3-216ENST00000592395 CDK8P49336 464 aa22.24■■□□□ 1.15
TCF3-216ENST00000592395 MFAP1P55081 439 aaKnown RBP22.24■■□□□ 1.15
TCF3-216ENST00000592395 TAF1CQ15572 869 aaPredicted RBP22.24■■□□□ 1.15
TCF3-216ENST00000592395 IFNLR1Q8IU57 520 aaPredicted RBP22.24■■□□□ 1.15
TCF3-216ENST00000592395 CASP8AP2Q9UKL3 1982 aa22.24■■□□□ 1.15
TCF3-216ENST00000592395 CCDC171Q6TFL3 1326 aa22.24■■□□□ 1.15
TCF3-216ENST00000592395 CRHR2Q13324 411 aa22.23■■□□□ 1.15
TCF3-216ENST00000592395 CWC27Q6UX04 472 aaKnown RBP22.23■■□□□ 1.15
TCF3-216ENST00000592395 ZNF589Q86UQ0 364 aaPredicted RBP22.23■■□□□ 1.15
TCF3-216ENST00000592395 CCDC17Q96LX7 622 aa22.23■■□□□ 1.15
TCF3-216ENST00000592395 RAB3GAP1Q15042 981 aa22.22■■□□□ 1.15
TCF3-216ENST00000592395 VPS53Q5VIR6 699 aa22.22■■□□□ 1.15
TCF3-216ENST00000592395 GADL1Q6ZQY3 521 aa22.22■■□□□ 1.15
TCF3-216ENST00000592395 PROCA1Q8NCQ7 364 aaPredicted RBP22.22■■□□□ 1.15
TCF3-216ENST00000592395 R3HDMLQ9H3Y0 253 aa22.22■■□□□ 1.15
TCF3-216ENST00000592395 ZFYVE28Q9HCC9 887 aa22.22■■□□□ 1.15
TCF3-216ENST00000592395 GPR25O00155 361 aa22.21■■□□□ 1.15
TCF3-216ENST00000592395 PDHXO00330 501 aa22.21■■□□□ 1.15
TCF3-216ENST00000592395 MPHOSPH10O00566 681 aaKnown RBP22.21■■□□□ 1.15
TCF3-216ENST00000592395 BACE1P56817 501 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms