RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 EVX2Q03828 476 aa18.34■□□□□ 0.53
ERCC1-213ENST00000592023 MTMR2Q13614 643 aa18.34■□□□□ 0.53
ERCC1-213ENST00000592023 UBE3CQ15386 1083 aa18.34■□□□□ 0.53
ERCC1-213ENST00000592023 ZSCAN25Q6NSZ9 544 aa18.34■□□□□ 0.53
ERCC1-213ENST00000592023 PROCA1Q8NCQ7 364 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-213ENST00000592023 OTUD7AQ8TE49 926 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-213ENST00000592023 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-213ENST00000592023 DCP1AQ9NPI6 582 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-213ENST00000592023 GH2P01242 217 aa18.33■□□□□ 0.52
ERCC1-213ENST00000592023 BCRP11274 1271 aa18.33■□□□□ 0.52
ERCC1-213ENST00000592023 WDR18Q9BV38 432 aa18.33■□□□□ 0.52
ERCC1-213ENST00000592023 PTCH2Q9Y6C5 1203 aa18.33■□□□□ 0.52
ERCC1-213ENST00000592023 CYP2D6P10635 497 aa18.32■□□□□ 0.52
ERCC1-213ENST00000592023 CTGFP29279 349 aa18.32■□□□□ 0.52
ERCC1-213ENST00000592023 TATDN1Q6P1N9 297 aa18.32■□□□□ 0.52
ERCC1-213ENST00000592023 KBTBD3Q8NAB2 608 aa18.32■□□□□ 0.52
ERCC1-213ENST00000592023 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
ERCC1-213ENST00000592023 PNMA3Q9UL41 463 aa18.32■□□□□ 0.52
ERCC1-213ENST00000592023 MGAMO43451 1857 aa18.32■□□□□ 0.52
ERCC1-213ENST00000592023 MYH8P13535 1937 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 SHMT1P34896 483 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 PSMC4P43686 418 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 RGS19P49795 217 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 BACE1P56817 501 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 MLLT1Q03111 559 aaPredicted RBP18.31■□□□□ 0.52
ERCC1-213ENST00000592023 SH3D19Q5HYK7 790 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 TRIM47Q96LD4 638 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
ERCC1-213ENST00000592023 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
ERCC1-213ENST00000592023 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
ERCC1-213ENST00000592023 ERC2O15083 957 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 FMNL1O95466 1100 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-213ENST00000592023 MX1P20591 662 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 GABPAQ06546 454 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■□□ 15.1
ERCC1-213ENST00000592023 HDAC1Q13547 482 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-213ENST00000592023 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 ABCB5Q2M3G0 1257 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 CERKLQ49MI3 558 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-213ENST00000592023 ANKRD45Q5TZF3 282 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 SLC44A5Q8NCS7 719 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 PI4K2BQ8TCG2 481 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 FEZ1Q99689 392 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 SLC4A4Q9Y6R1 1079 aa18.3■□□□□ 0.52
ERCC1-213ENST00000592023 USP17L10C9JJH3 530 aa18.29■□□□□ 0.52
ERCC1-213ENST00000592023 OSBPP22059 807 aa18.29■□□□□ 0.52
ERCC1-213ENST00000592023 ZYXQ15942 572 aaKnown RBP18.29■□□□□ 0.52
ERCC1-213ENST00000592023 SLC9C1Q4G0N8 1177 aa18.29■□□□□ 0.52
ERCC1-213ENST00000592023 ATP8A2Q9NTI2 1148 aa18.29■□□□□ 0.52
ERCC1-213ENST00000592023 MYPNQ86TC9 1320 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 RBBP6Q7Z6E9 1792 aaKnown RBP18.28■□□□□ 0.52
ERCC1-213ENST00000592023 CYP2D7A0A087X1C5 515 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 GLRX3O76003 335 aaKnown RBP18.28■□□□□ 0.52
ERCC1-213ENST00000592023 GNRH1P01148 92 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 FCGRTP55899 365 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 AMOTL1Q8IY63 956 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 ANKRD13CQ8N6S4 541 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 APPBP2Q92624 585 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 ARMC5Q96C12 935 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 DYNLL2Q96FJ2 89 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 DDRGK1Q96HY6 314 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 ASCC2Q9H1I8 757 aaPredicted RBP18.28■□□□□ 0.52
ERCC1-213ENST00000592023 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
ERCC1-213ENST00000592023 SALL3Q9BXA9 1300 aa18.27■□□□□ 0.52
ERCC1-213ENST00000592023 C19orf81C9J6K1 198 aa18.27■□□□□ 0.52
ERCC1-213ENST00000592023 MPHOSPH10O00566 681 aaKnown RBP18.27■□□□□ 0.52
ERCC1-213ENST00000592023 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
ERCC1-213ENST00000592023 PRMT2P55345 433 aa18.27■□□□□ 0.52
ERCC1-213ENST00000592023 IRX3P78415 501 aaPredicted RBP18.27■□□□□ 0.52
ERCC1-213ENST00000592023 OSBP2Q969R2 916 aa18.27■□□□□ 0.52
ERCC1-213ENST00000592023 SRRDQ9UH36 339 aa18.27■□□□□ 0.52
ERCC1-213ENST00000592023 HTTP42858 3142 aa18.27■□□□□ 0.51
ERCC1-213ENST00000592023 USP17L12C9JPN9 530 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 USP17L21D6R901 530 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 ZFYP08048 801 aaPredicted RBP18.26■□□□□ 0.51
ERCC1-213ENST00000592023 HOXD10P28358 340 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 PRKCZQ05513 592 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 AAMPQ13685 434 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 FAM110CQ1W6H9 321 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 USP17L2Q6R6M4 530 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 SH3TC2Q8TF17 1288 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 FSD1Q9BTV5 496 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 SWAP70Q9UH65 585 aa18.26■□□□□ 0.51
ERCC1-213ENST00000592023 M0R2C6 588 aa18.25■□□□□ 0.51
ERCC1-213ENST00000592023 MYCP01106 439 aaPredicted RBP18.25■□□□□ 0.51
ERCC1-213ENST00000592023 GUCY1A2P33402 732 aa18.25■□□□□ 0.51
ERCC1-213ENST00000592023 GCLCP48506 637 aaPredicted RBP18.25■□□□□ 0.51
ERCC1-213ENST00000592023 SEPT2Q15019 361 aa18.25■□□□□ 0.51
ERCC1-213ENST00000592023 C12orf60Q5U649 245 aa18.25■□□□□ 0.51
ERCC1-213ENST00000592023 RAET1EQ8TD07 263 aa18.25■□□□□ 0.51
ERCC1-213ENST00000592023 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
ERCC1-213ENST00000592023 ZNF333Q96JL9 665 aa18.25■□□□□ 0.51
ERCC1-213ENST00000592023 STRBPQ96SI9 672 aaKnown RBP18.25■□□□□ 0.51
ERCC1-213ENST00000592023 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
ERCC1-213ENST00000592023 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
ERCC1-213ENST00000592023 POTEFA5A3E0 1075 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms