RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 HDAC5Q9UQL6 1122 aa12.61□□□□□ -0.39
SDF2-209ENST00000591903 DNM1LO00429 736 aa12.6□□□□□ -0.39
SDF2-209ENST00000591903 CAP2P40123 477 aa12.6□□□□□ -0.39
SDF2-209ENST00000591903 SHHQ15465 462 aa12.6□□□□□ -0.39
SDF2-209ENST00000591903 KLHDC4Q8TBB5 520 aa12.6□□□□□ -0.39
SDF2-209ENST00000591903 LPAR1Q92633 364 aa12.6□□□□□ -0.39
SDF2-209ENST00000591903 TMOD4Q9NZQ9 345 aa12.6□□□□□ -0.39
SDF2-209ENST00000591903 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
SDF2-209ENST00000591903 PDS5AQ29RF7 1337 aaKnown RBP12.6□□□□□ -0.39
SDF2-209ENST00000591903 BTDP43251 543 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
SDF2-209ENST00000591903 HERVK_113P62684 666 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 AAMPQ13685 434 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 MORN1Q5T089 497 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 SPTY2D1Q68D10 685 aaPredicted RBP12.59□□□□□ -0.39
SDF2-209ENST00000591903 GPR142Q7Z601 462 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 PLEKHH3Q7Z736 793 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 FTSJ3Q8IY81 847 aaKnown RBP12.59□□□□□ -0.39
SDF2-209ENST00000591903 FRAT1Q92837 279 aaPredicted RBP12.59□□□□□ -0.39
SDF2-209ENST00000591903 WDR18Q9BV38 432 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 TTYH1Q9H313 450 aaPredicted RBP12.59□□□□□ -0.39
SDF2-209ENST00000591903 HERC5Q9UII4 1024 aaKnown RBP12.59□□□□□ -0.39
SDF2-209ENST00000591903 MROH7-TTC4A0A0A0MT08 1334 aa12.59□□□□□ -0.39
SDF2-209ENST00000591903 C19orf81C9J6K1 198 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 GLRX3O76003 335 aaKnown RBP12.58□□□□□ -0.4
SDF2-209ENST00000591903 SLURP2P0DP57 97 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 PLA2G5P39877 138 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 BACE1P56817 501 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 RTP1P59025 263 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 ERVK-24P63145 666 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 CCL14Q16627 93 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 P2RX7Q99572 595 aaKnown RBP12.58□□□□□ -0.4
SDF2-209ENST00000591903 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
SDF2-209ENST00000591903 TXNRD2Q9NNW7 524 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
SDF2-209ENST00000591903 DDX20Q9UHI6 824 aaKnown RBP12.58□□□□□ -0.4
SDF2-209ENST00000591903 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
SDF2-209ENST00000591903 CIAO1O76071 339 aa12.57□□□□□ -0.4
SDF2-209ENST00000591903 ASNSP08243 561 aa12.57□□□□□ -0.4
SDF2-209ENST00000591903 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
SDF2-209ENST00000591903 MAP2K5Q13163 448 aa12.57□□□□□ -0.4
SDF2-209ENST00000591903 MTMR2Q13614 643 aa12.57□□□□□ -0.4
SDF2-209ENST00000591903 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
SDF2-209ENST00000591903 ABCF2Q9UG63 623 aa12.57□□□□□ -0.4
SDF2-209ENST00000591903 FAM196BA6NMK8 535 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 PHKA1P46020 1223 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 RFX5P48382 616 aaPredicted RBP12.56□□□□□ -0.4
SDF2-209ENST00000591903 RHBDL3P58872 404 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 CCNA1P78396 465 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 C9orf50Q5SZB4 431 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 ATG9AQ7Z3C6 839 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 ARRDC4Q8NCT1 418 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 EDC3Q96F86 508 aaKnown RBP12.56□□□□□ -0.4
SDF2-209ENST00000591903 PORCNQ9H237 461 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 GINM1Q9NU53 330 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 RBPJLQ9UBG7 517 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 ATP11BQ9Y2G3 1177 aa12.56□□□□□ -0.4
SDF2-209ENST00000591903 SIPA1L1O43166 1804 aa12.55□□□□□ -0.4
SDF2-209ENST00000591903 KBTBD13C9JR72 458 aa12.55□□□□□ -0.4
SDF2-209ENST00000591903 LDHCP07864 332 aa12.55□□□□□ -0.4
SDF2-209ENST00000591903 GNAI3P08754 354 aa12.55□□□□□ -0.4
SDF2-209ENST00000591903 GSTO1P78417 241 aa12.55□□□□□ -0.4
SDF2-209ENST00000591903 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
SDF2-209ENST00000591903 ERICH6Q7L0X2 663 aa12.55□□□□□ -0.4
SDF2-209ENST00000591903 DHX36Q9H2U1 1008 aaKnown RBP12.55□□□□□ -0.4
SDF2-209ENST00000591903 PRDM5Q9NQX1 630 aaPredicted RBP12.55□□□□□ -0.4
SDF2-209ENST00000591903 PI4KBQ9UBF8 816 aa12.55□□□□□ -0.4
SDF2-209ENST00000591903 FOCADQ5VW36 1801 aa12.55□□□□□ -0.4
SDF2-209ENST00000591903 NCOR1O75376 2440 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 SLC15A5A6NIM6 579 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 USP17L10C9JJH3 530 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 CNGA1P29973 690 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 RASGRF1Q13972 1273 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 SNX17Q15036 470 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 Q3C1V9 767 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
SDF2-209ENST00000591903 BADQ92934 168 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 PAGR1Q9BTK6 254 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
SDF2-209ENST00000591903 ZNF236Q9UL36 1845 aa12.53□□□□□ -0.4
SDF2-209ENST00000591903 HOXC6P09630 235 aa12.53□□□□□ -0.4
SDF2-209ENST00000591903 IL15P40933 162 aaPredicted RBP12.53□□□□□ -0.4
SDF2-209ENST00000591903 ATP2B2Q01814 1243 aa12.53□□□□□ -0.4
SDF2-209ENST00000591903 MECOMQ03112 1051 aa12.53□□□□□ -0.4
SDF2-209ENST00000591903 C1orf53Q5VUE5 145 aa12.53□□□□□ -0.4
SDF2-209ENST00000591903 TMEM57Q8N5G2 664 aa12.53□□□□□ -0.4
SDF2-209ENST00000591903 RNPC3Q96LT9 517 aaKnown RBP12.53□□□□□ -0.4
SDF2-209ENST00000591903 IVNS1ABPQ9Y6Y0 642 aa12.53□□□□□ -0.4
SDF2-209ENST00000591903 PEX10O60683 326 aa12.52□□□□□ -0.41
SDF2-209ENST00000591903 RLBP1P12271 317 aa12.52□□□□□ -0.41
SDF2-209ENST00000591903 PTPREP23469 700 aa12.52□□□□□ -0.41
SDF2-209ENST00000591903 RRP1BQ14684 758 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms