RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ANKRD23Q86SG2 305 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
BRCA1-227ENST00000591849 PLEKHM2Q8IWE5 1019 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 FEZ1Q99689 392 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 ZCCHC17Q9NP64 241 aaKnown RBP12.07□□□□□ -0.48
BRCA1-227ENST00000591849 TMOD4Q9NZQ9 345 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-227ENST00000591849 SWAP70Q9UH65 585 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 MAST2Q6P0Q8 1798 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 SALL3Q9BXA9 1300 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 GH2P01242 217 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 SP3Q02447 781 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 RRP1BQ14684 758 aaKnown RBP12.06□□□□□ -0.48
BRCA1-227ENST00000591849 KIF22Q14807 665 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 ZMYM1Q5SVZ6 1142 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 CTU1Q7Z7A3 348 aaKnown RBP12.06□□□□□ -0.48
BRCA1-227ENST00000591849 ERO1AQ96HE7 468 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 CFHR5Q9BXR6 569 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 DNAJC18Q9H819 358 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 ZBTB21Q9ULJ3 1066 aa12.06□□□□□ -0.48
BRCA1-227ENST00000591849 A0A0G2JLL6 359 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 M0R2C6 588 aa12.05□□□□□ -0.48
BRCA1-227ENST00000591849 CENPBP07199 599 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 HMGCS2P54868 508 aa12.05□□□□□ -0.48
BRCA1-227ENST00000591849 PABPC4Q13310 644 aaKnown RBP eCLIP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 NOM1Q5C9Z4 860 aaKnown RBP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 TATDN1Q6P1N9 297 aa12.05□□□□□ -0.48
BRCA1-227ENST00000591849 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
BRCA1-227ENST00000591849 PRRT2Q7Z6L0 340 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 STK11IPQ8N1F8 1099 aa12.05□□□□□ -0.48
BRCA1-227ENST00000591849 DYNLL2Q96FJ2 89 aa12.05□□□□□ -0.48
BRCA1-227ENST00000591849 SEC62Q99442 399 aaKnown RBP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 PARK7Q99497 189 aaKnown RBP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 ARPP21Q9UBL0 812 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-227ENST00000591849 CYP2D7A0A087X1C5 515 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 GSG1L2A8MUP6 293 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 C19orf81C9J6K1 198 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 USP17L10C9JJH3 530 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 TLR2O60603 784 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 SLC3A2P08195 630 aaKnown RBP12.04□□□□□ -0.48
BRCA1-227ENST00000591849 OSBPP22059 807 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 SHMT1P34896 483 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 CDK8P49336 464 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 C12orf60Q5U649 245 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 CTR9Q6PD62 1173 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 SMCR8Q8TEV9 937 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-227ENST00000591849 CCDC17Q96LX7 622 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 WDR18Q9BV38 432 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 NAPBQ9H115 298 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 ZNF287Q9HBT7 754 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 HELLSQ9NRZ9 838 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 PNMA3Q9UL41 463 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
BRCA1-227ENST00000591849 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-227ENST00000591849 SLC34A2O95436 690 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 MFAP1P55081 439 aaKnown RBP12.03□□□□□ -0.48
BRCA1-227ENST00000591849 BACE1P56817 501 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 IRX3P78415 501 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-227ENST00000591849 JAG1P78504 1218 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 MTMR2Q13614 643 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 ZYXQ15942 572 aaKnown RBP12.03□□□□□ -0.48
BRCA1-227ENST00000591849 PKN2Q16513 984 aaKnown RBP12.03□□□□□ -0.48
BRCA1-227ENST00000591849 MCMDC2Q4G0Z9 681 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 GPAT2Q6NUI2 795 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-227ENST00000591849 SLC44A5Q8NCS7 719 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 CD99L2Q8TCZ2 262 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 OSBPL3Q9H4L5 887 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 EFCC1Q9HA90 598 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 DIAPH3Q9NSV4 1193 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 AGTPBP1Q9UPW5 1226 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 TRIM17Q9Y577 477 aa12.03□□□□□ -0.48
BRCA1-227ENST00000591849 MYO5AQ9Y4I1 1855 aaKnown RBP12.03□□□□□ -0.48
BRCA1-227ENST00000591849 HIP1O00291 1037 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 CYP2C8P10632 490 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 USP14P54578 494 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 ATP2B2Q01814 1243 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 GABPAQ06546 454 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 MOGSQ13724 837 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 SEPT2Q15019 361 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 SHROOM1Q2M3G4 852 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-227ENST00000591849 SBK1Q52WX2 424 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 TMEM179Q6ZVK1 233 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 TICAM2Q86XR7 235 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 ZNF444Q8N0Y2 327 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-227ENST00000591849 SLC45A1Q9Y2W3 748 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 DOCK2Q92608 1830 aa12.02□□□□□ -0.49
BRCA1-227ENST00000591849 OTOFQ9HC10 1997 aa12.01□□□□□ -0.49
BRCA1-227ENST00000591849 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-227ENST00000591849 SDSP20132 328 aa12.01□□□□□ -0.49
BRCA1-227ENST00000591849 EVX2Q03828 476 aa12.01□□□□□ -0.49
BRCA1-227ENST00000591849 NMIQ13287 307 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms