RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 ZNF532Q9HCE3 1301 aa12.42□□□□□ -0.42
LINC01140-210ENST00000590653 KDM6AO15550 1401 aaPredicted RBP12.42□□□□□ -0.42
LINC01140-210ENST00000590653 IFIT5Q13325 482 aaKnown RBP12.42□□□□□ -0.42
LINC01140-210ENST00000590653 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
LINC01140-210ENST00000590653 EEF2KMTQ96G04 330 aa12.42□□□□□ -0.42
LINC01140-210ENST00000590653 FAM204AQ9H8W3 233 aa12.42□□□□□ -0.42
LINC01140-210ENST00000590653 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
LINC01140-210ENST00000590653 HDAC6Q9UBN7 1215 aa12.42□□□□□ -0.42
LINC01140-210ENST00000590653 FBXO2Q9UK22 296 aaPredicted RBP12.42□□□□□ -0.42
LINC01140-210ENST00000590653 L1RE1Q9UN81 338 aa12.42□□□□□ -0.42
LINC01140-210ENST00000590653 PLCD1P51178 756 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 NTRK3Q16288 839 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 PIH1D3Q9NQM4 214 aaKnown RBP12.41□□□□□ -0.42
LINC01140-210ENST00000590653 TAB2Q9NYJ8 693 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 CTNND2Q9UQB3 1225 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 SYNRGQ9UMZ2 1314 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 LRRIQ3A6PVS8 624 aaPredicted RBP12.41□□□□□ -0.42
LINC01140-210ENST00000590653 SRGAP2O75044 1071 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 PTPREP23469 700 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 SLC20A2Q08357 652 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 IGDCC4Q8TDY8 1250 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 NAPGQ99747 312 aaPredicted RBP12.41□□□□□ -0.42
LINC01140-210ENST00000590653 NAPBQ9H115 298 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 LY9Q9HBG7 655 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 MRC1P22897 1456 aa12.41□□□□□ -0.42
LINC01140-210ENST00000590653 RNF225M0QZC1 329 aaPredicted RBP12.4□□□□□ -0.42
LINC01140-210ENST00000590653 PRDM1O75626 825 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 FKBP15Q5T1M5 1219 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 GPIHBP1Q8IV16 184 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 GSPT2Q8IYD1 628 aaKnown RBP12.4□□□□□ -0.42
LINC01140-210ENST00000590653 FBXL16Q8N461 479 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 A0A1B0GTH6 734 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 CPDO75976 1380 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 A0A087X0B3 334 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 PRKAB2O43741 272 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 MRPS25P82663 173 aaKnown RBP12.4□□□□□ -0.42
LINC01140-210ENST00000590653 RTN1Q16799 776 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 PANX2Q96RD6 677 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 ARMT1Q9H993 441 aa12.4□□□□□ -0.42
LINC01140-210ENST00000590653 MFAP3LO75121 409 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 MMP1P03956 469 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 ZNF174Q15697 407 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 VPS54Q9P1Q0 977 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
LINC01140-210ENST00000590653 GYPCP04921 128 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 KRT9P35527 623 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 ADD2P35612 726 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 SPATA1Q5VX52 437 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 RRAGBQ5VZM2 374 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 CHP1Q99653 195 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 NFAT5O94916 1531 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 EIF3CLB5ME19 914 aaKnown RBP12.39□□□□□ -0.43
LINC01140-210ENST00000590653 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
LINC01140-210ENST00000590653 MBD4O95243 580 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 IVLP07476 585 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 PHKA1P46020 1223 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 ERVK-24P63145 666 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 NOM1Q5C9Z4 860 aaKnown RBP12.39□□□□□ -0.43
LINC01140-210ENST00000590653 EIF3CQ99613 913 aaKnown RBP12.39□□□□□ -0.43
LINC01140-210ENST00000590653 ADD3Q9UEY8 706 aaKnown RBP12.39□□□□□ -0.43
LINC01140-210ENST00000590653 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
LINC01140-210ENST00000590653 MYO1BO43795 1136 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 PDE6AP16499 860 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 TDO2P48775 406 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 GTF2A1P52655 376 aaPredicted RBP12.38□□□□□ -0.43
LINC01140-210ENST00000590653 RILPL1Q5EBL4 403 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 MIGA1Q8NAN2 632 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 MYO6Q9UM54 1294 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 MINDY4BA8MYZ0 360 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 RNF40O75150 1001 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 SARSP49591 514 aaKnown RBP12.38□□□□□ -0.43
LINC01140-210ENST00000590653 MAGEB6Q8N7X4 407 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 SYMPKQ92797 1274 aaKnown RBP12.38□□□□□ -0.43
LINC01140-210ENST00000590653 TMEM87BQ96K49 555 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 DRC1Q96MC2 740 aa12.38□□□□□ -0.43
LINC01140-210ENST00000590653 MARF1Q9Y4F3 1742 aaKnown RBP12.38□□□□□ -0.43
LINC01140-210ENST00000590653 FAM237AA0A1B0GTK4 181 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
LINC01140-210ENST00000590653 DNAJC21Q5F1R6 531 aaKnown RBP12.37□□□□□ -0.43
LINC01140-210ENST00000590653 LRRC31Q6UY01 552 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 MFSD6Q6ZSS7 791 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 CAGE1Q8TC20 777 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 PAGE5Q96GU1 130 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 ERICH2A1L162 156 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 CIAO1O76071 339 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 FMNL1O95466 1100 aaPredicted RBP12.37□□□□□ -0.43
LINC01140-210ENST00000590653 DPYDQ12882 1025 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 WTAPQ15007 396 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 TTC19Q6DKK2 380 aaPredicted RBP12.37□□□□□ -0.43
LINC01140-210ENST00000590653 RASGRP2Q7LDG7 609 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 CNGA4Q8IV77 575 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 CCDC148Q8NFR7 591 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 IQSEC3Q9UPP2 1182 aaPredicted RBP12.37□□□□□ -0.43
LINC01140-210ENST00000590653 LMO7Q8WWI1 1683 aa12.37□□□□□ -0.43
LINC01140-210ENST00000590653 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms