RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 ASNSP08243 561 aa16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 MTMR2Q13614 643 aa16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 CERS3Q8IU89 383 aa16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 ZBTB21Q9ULJ3 1066 aa16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 POTEFA5A3E0 1075 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 GH2P01242 217 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 CYP2D6P10635 497 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 OSBPP22059 807 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 TMED8Q6PL24 325 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 TTC6Q86TZ1 520 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 SMCR8Q8TEV9 937 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 SH3TC2Q8TF17 1288 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 CRNKL1Q9BZJ0 848 aaKnown RBP16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 MCM9Q9NXL9 1143 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 SERPINB13Q9UIV8 391 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 SLC45A1Q9Y2W3 748 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 BRCA2P51587 3418 aa16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 TNRC18O15417 2968 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-228ENST00000590248 SMIM22K7EJ46 135 aa16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 MBD4O95243 580 aa16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 SLC9C1Q4G0N8 1177 aa16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 SH3D19Q5HYK7 790 aa16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 ANKRD13CQ8N6S4 541 aa16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 PROCA1Q8NCQ7 364 aaPredicted RBP16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 OTUD7AQ8TE49 926 aaPredicted RBP16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 ARMC5Q96C12 935 aa16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 DCP1AQ9NPI6 582 aaPredicted RBP16.61■□□□□ 0.25
NEDD4L-228ENST00000590248 SHMT1P34896 483 aa16.6■□□□□ 0.25
NEDD4L-228ENST00000590248 BACE1P56817 501 aa16.6■□□□□ 0.25
NEDD4L-228ENST00000590248 CERKLQ49MI3 558 aaPredicted RBP16.6■□□□□ 0.25
NEDD4L-228ENST00000590248 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
NEDD4L-228ENST00000590248 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.6■□□□□ 0.25
NEDD4L-228ENST00000590248 PUS7LQ9H0K6 701 aaKnown RBP16.6■□□□□ 0.25
NEDD4L-228ENST00000590248 EHD4Q9H223 541 aa16.6■□□□□ 0.25
NEDD4L-228ENST00000590248 PEX10O60683 326 aa16.59■□□□□ 0.25
NEDD4L-228ENST00000590248 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
NEDD4L-228ENST00000590248 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
NEDD4L-228ENST00000590248 ASCC2Q9H1I8 757 aaPredicted RBP16.59■□□□□ 0.25
NEDD4L-228ENST00000590248 SRRDQ9UH36 339 aa16.59■□□□□ 0.25
NEDD4L-228ENST00000590248 GABRQQ9UN88 632 aa16.59■□□□□ 0.25
NEDD4L-228ENST00000590248 RBBP6Q7Z6E9 1792 aaKnown RBP16.59■□□□□ 0.25
NEDD4L-228ENST00000590248 CYP2D7A0A087X1C5 515 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 USP17L10C9JJH3 530 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 GNRH1P01148 92 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 EN2P19622 333 aaPredicted RBP16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 FCGRTP55899 365 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 PRKCZQ05513 592 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 GABPAQ06546 454 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 ABCB5Q2M3G0 1257 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 NBPF11Q86T75 865 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 SLC44A5Q8NCS7 719 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 DYNLL2Q96FJ2 89 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 ZNF333Q96JL9 665 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 EMILIN3Q9NT22 766 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 TMOD4Q9NZQ9 345 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 MYPNQ86TC9 1320 aa16.58■□□□□ 0.24
NEDD4L-228ENST00000590248 C19orf81C9J6K1 198 aa16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 HOXD10P28358 340 aa16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 RAET1EQ8TD07 263 aa16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 ACER1Q8TDN7 264 aa16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 P2RX7Q99572 595 aaKnown RBP16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 GINM1Q9NU53 330 aa16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 PDE4DIPQ5VU43 2346 aa16.57■□□□□ 0.24
NEDD4L-228ENST00000590248 PRMT2P55345 433 aa16.56■□□□□ 0.24
NEDD4L-228ENST00000590248 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
NEDD4L-228ENST00000590248 ANKRD45Q5TZF3 282 aa16.56■□□□□ 0.24
NEDD4L-228ENST00000590248 ZSCAN25Q6NSZ9 544 aa16.56■□□□□ 0.24
NEDD4L-228ENST00000590248 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
NEDD4L-228ENST00000590248 GPATCH3Q96I76 525 aa16.56■□□□□ 0.24
NEDD4L-228ENST00000590248 USP17L12C9JPN9 530 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 USP17L21D6R901 530 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 MPHOSPH10O00566 681 aaKnown RBP16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 TNPO2O14787 897 aaKnown RBP16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 IRX3P78415 501 aaPredicted RBP16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 SEPT2Q15019 361 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 MTFR1Q15390 333 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 PI4K2BQ8TCG2 481 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 FEZ1Q99689 392 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 CABP5Q9NP86 173 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 MKI67P46013 3256 aaKnown RBP16.55■□□□□ 0.24
NEDD4L-228ENST00000590248 HOXA7P31268 230 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 GRK4P32298 578 aa16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 GCLCP48506 637 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 FLT3LGP49771 235 aa16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 C12orf60Q5U649 245 aa16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 USP17L2Q6R6M4 530 aa16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 STK11IPQ8N1F8 1099 aa16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 OSBP2Q969R2 916 aa16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 STRBPQ96SI9 672 aaKnown RBP16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 TXNRD2Q9NNW7 524 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms