RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 POTEEQ6S8J3 1075 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-209ENST00000590035 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 SMCR8Q8TEV9 937 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-209ENST00000590035 RNF208Q9H0X6 261 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 ASCC2Q9H1I8 757 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-209ENST00000590035 GINM1Q9NU53 330 aa12.76□□□□□ -0.37
RETREG3-209ENST00000590035 TNPO2O14787 897 aaKnown RBP12.75□□□□□ -0.37
RETREG3-209ENST00000590035 ASNSP08243 561 aa12.75□□□□□ -0.37
RETREG3-209ENST00000590035 MYH1P12882 1939 aa12.75□□□□□ -0.37
RETREG3-209ENST00000590035 ELNP15502 786 aa12.75□□□□□ -0.37
RETREG3-209ENST00000590035 BACE1P56817 501 aa12.75□□□□□ -0.37
RETREG3-209ENST00000590035 TMED8Q6PL24 325 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-209ENST00000590035 MAPKAPK5Q8IW41 473 aa12.75□□□□□ -0.37
RETREG3-209ENST00000590035 TGFBRAP1Q8WUH2 860 aa12.75□□□□□ -0.37
RETREG3-209ENST00000590035 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
RETREG3-209ENST00000590035 DYNLL1P63167 89 aaKnown RBP12.74□□□□□ -0.37
RETREG3-209ENST00000590035 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
RETREG3-209ENST00000590035 MIER1Q8N108 512 aa12.74□□□□□ -0.37
RETREG3-209ENST00000590035 CCDC8Q9H0W5 538 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-209ENST00000590035 AS3MTQ9HBK9 375 aa12.74□□□□□ -0.37
RETREG3-209ENST00000590035 PALD1Q9ULE6 856 aa12.74□□□□□ -0.37
RETREG3-209ENST00000590035 ZBTB21Q9ULJ3 1066 aa12.74□□□□□ -0.37
RETREG3-209ENST00000590035 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
RETREG3-209ENST00000590035 HNRNPUQ00839 825 aaKnown RBP eCLIP12.73□□□□□ -0.37
RETREG3-209ENST00000590035 PABPC4Q13310 644 aaKnown RBP eCLIP12.73□□□□□ -0.37
RETREG3-209ENST00000590035 MTMR2Q13614 643 aa12.73□□□□□ -0.37
RETREG3-209ENST00000590035 ITPRIPQ8IWB1 547 aa12.73□□□□□ -0.37
RETREG3-209ENST00000590035 USP6NLQ92738 828 aa12.73□□□□□ -0.37
RETREG3-209ENST00000590035 COA7Q96BR5 231 aa12.73□□□□□ -0.37
RETREG3-209ENST00000590035 C12orf42Q96LP6 360 aa12.73□□□□□ -0.37
RETREG3-209ENST00000590035 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
RETREG3-209ENST00000590035 EHD4Q9H223 541 aa12.73□□□□□ -0.37
RETREG3-209ENST00000590035 ANTXR1Q9H6X2 564 aa12.73□□□□□ -0.37
RETREG3-209ENST00000590035 TXNRD2Q9NNW7 524 aa12.73□□□□□ -0.37
RETREG3-209ENST00000590035 C19orf81C9J6K1 198 aa12.72□□□□□ -0.37
RETREG3-209ENST00000590035 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-209ENST00000590035 CYP7A1P22680 504 aa12.72□□□□□ -0.37
RETREG3-209ENST00000590035 OS9Q13438 667 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-209ENST00000590035 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
RETREG3-209ENST00000590035 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
RETREG3-209ENST00000590035 FTSJ3Q8IY81 847 aaKnown RBP12.72□□□□□ -0.37
RETREG3-209ENST00000590035 P2RX7Q99572 595 aaKnown RBP12.72□□□□□ -0.37
RETREG3-209ENST00000590035 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
RETREG3-209ENST00000590035 EMILIN3Q9NT22 766 aa12.72□□□□□ -0.37
RETREG3-209ENST00000590035 NDUFB9Q9Y6M9 179 aa12.72□□□□□ -0.37
RETREG3-209ENST00000590035 USP17L10C9JJH3 530 aa12.71□□□□□ -0.37
RETREG3-209ENST00000590035 GDF11O95390 407 aa12.71□□□□□ -0.37
RETREG3-209ENST00000590035 HMGCRP04035 888 aa12.71□□□□□ -0.37
RETREG3-209ENST00000590035 HERVK_113P62684 666 aa12.71□□□□□ -0.37
RETREG3-209ENST00000590035 GABPAQ06546 454 aa12.71□□□□□ -0.37
RETREG3-209ENST00000590035 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
RETREG3-209ENST00000590035 RBPJLQ9UBG7 517 aa12.71□□□□□ -0.37
RETREG3-209ENST00000590035 BIN2Q9UBW5 565 aaPredicted RBP12.71□□□□□ -0.37
RETREG3-209ENST00000590035 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
RETREG3-209ENST00000590035 PEX10O60683 326 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 XRCC5P13010 732 aaKnown RBP12.7□□□□□ -0.38
RETREG3-209ENST00000590035 TRIM32Q13049 653 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 ERC1Q8IUD2 1116 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 SIRT2Q8IXJ6 389 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.7□□□□□ -0.38
RETREG3-209ENST00000590035 TRIB2Q92519 343 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 DEFB118Q96PH6 123 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 HTATIP2Q9BUP3 242 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.7□□□□□ -0.38
RETREG3-209ENST00000590035 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
RETREG3-209ENST00000590035 SAP30BPQ9UHR5 308 aaKnown RBP12.7□□□□□ -0.38
RETREG3-209ENST00000590035 RLFQ13129 1914 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 NAV1Q8NEY1 1877 aa12.7□□□□□ -0.38
RETREG3-209ENST00000590035 CNMDO75829 334 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 IDH1O75874 414 aaKnown RBP12.69□□□□□ -0.38
RETREG3-209ENST00000590035 IGHA2P01877 340 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 HLA-DOAP06340 250 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 SHMT1P34896 483 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 Q3C1V9 767 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 MORN1Q5T089 497 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 LBX2Q6XYB7 198 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 MAGEB6Q8N7X4 407 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 ANKLE1Q8NAG6 615 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 MIGA1Q8NAN2 632 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 RHPN1Q8TCX5 695 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
RETREG3-209ENST00000590035 RPTORQ8N122 1335 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 GH2P01242 217 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 ERVK-24P63145 666 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 IRX3P78415 501 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-209ENST00000590035 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 AACSQ86V21 672 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 CRACR2BQ8N4Y2 399 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-209ENST00000590035 GPRC5AQ8NFJ5 357 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 DIS3LQ8TF46 1054 aaKnown RBP12.68□□□□□ -0.38
RETREG3-209ENST00000590035 GTF3C2Q8WUA4 911 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-209ENST00000590035 DPF3Q92784 378 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 KIAA1683Q9H0B3 1180 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 PORCNQ9H237 461 aa12.68□□□□□ -0.38
RETREG3-209ENST00000590035 ZBTB40Q9NUA8 1239 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms