RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SMCHD1A6NHR9 2005 aa7.72□□□□□ -1.17
VPS25-204ENST00000589577 KIAA0355O15063 1070 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 MSCO60682 206 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 ENTPD3O75355 529 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 FRAT2O75474 233 aaPredicted RBP7.71□□□□□ -1.18
VPS25-204ENST00000589577 CYBAP13498 195 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 IGFBP4P22692 258 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 MAPK4P31152 587 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 CYP2C19P33261 490 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 ADCYAP1R1P41586 468 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 HERVK_113P62684 666 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 ERVK-24P63145 666 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 FPGSQ05932 587 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 MAP2K5Q13163 448 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 TAF7LQ5H9L4 462 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 C16orf59Q7L2K0 433 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 PLEKHH3Q7Z736 793 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 VPS37DQ86XT2 251 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 ZNF280CQ8ND82 737 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 GPRC5AQ8NFJ5 357 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 RUNDC1Q96C34 613 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.71□□□□□ -1.182e-6■□□□□ 9.5
VPS25-204ENST00000589577 CD320Q9NPF0 282 aa7.71□□□□□ -1.18
VPS25-204ENST00000589577 SMIM22K7EJ46 135 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 ANP32CO43423 234 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 TLL1O43897 1013 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 CLTBP09497 229 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 CNGA1P29973 690 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 HOXA7P31268 230 aaPredicted RBP7.7□□□□□ -1.18
VPS25-204ENST00000589577 PABPC4Q13310 644 aaKnown RBP eCLIP7.7□□□□□ -1.18
VPS25-204ENST00000589577 CAVIN4Q5BKX8 364 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 MFSD14CQ5VZR4 134 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 ANO1Q5XXA6 986 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 NPLOC4Q8TAT6 608 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 DNAAF4Q8WXU2 420 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 FERMT2Q96AC1 680 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 KAZALD1Q96I82 304 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 TACC3Q9Y6A5 838 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 NDUFB9Q9Y6M9 179 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 MROH5Q6ZUA9 1318 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 CDK5RAP2Q96SN8 1893 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 MYO15AQ9UKN7 3530 aa7.7□□□□□ -1.18
VPS25-204ENST00000589577 COL4A4P53420 1690 aaPredicted RBP7.7□□□□□ -1.18
VPS25-204ENST00000589577 PRR33A8MZF0 331 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 KBTBD13C9JR72 458 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 PI4K2BG5E9Z4 385 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 ERC2O15083 957 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 CNMDO75829 334 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 HOXC6P09630 235 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 RAG1P15918 1043 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 FGFR2P21802 821 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 GNAI1P63096 354 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 IRX3P78415 501 aaPredicted RBP7.69□□□□□ -1.18
VPS25-204ENST00000589577 JAG1P78504 1218 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 FLIIQ13045 1269 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 MTMR2Q13614 643 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 LRRC41Q15345 812 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 LRRC24Q50LG9 513 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 DIEXFQ68CQ4 756 aaKnown RBP7.69□□□□□ -1.18
VPS25-204ENST00000589577 ZSCAN29Q8IWY8 852 aaPredicted RBP7.69□□□□□ -1.18
VPS25-204ENST00000589577 ARRDC4Q8NCT1 418 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 EDC3Q96F86 508 aaKnown RBP7.69□□□□□ -1.18
VPS25-204ENST00000589577 YBX2Q9Y2T7 364 aaKnown RBP7.69□□□□□ -1.18
VPS25-204ENST00000589577 GAKO14976 1311 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 KIF16BQ96L93 1317 aa7.69□□□□□ -1.18
VPS25-204ENST00000589577 TBC1D12O60347 775 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 PDE8BO95263 885 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 SLC4A2P04920 1241 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 CAP2P40123 477 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 FAAP100Q0VG06 881 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 AAK1Q2M2I8 961 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 SHROOM1Q2M3G4 852 aaPredicted RBP7.68□□□□□ -1.18
VPS25-204ENST00000589577 FAM47AQ5JRC9 791 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 TMEM240Q5SV17 173 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 BEND3Q5T5X7 828 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 MICALL1Q8N3F8 863 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 WDR66Q8TBY9 1149 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 FBXL18Q96ME1 805 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 PHOX2BQ99453 314 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 PAGR1Q9BTK6 254 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 STK31Q9BXU1 1019 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 OSBPL5Q9H0X9 879 aaPredicted RBP7.68□□□□□ -1.18
VPS25-204ENST00000589577 NKX2-4Q9H2Z4 354 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 PHF24Q9UPV7 400 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 MYBBP1AQ9BQG0 1328 aaKnown RBP7.68□□□□□ -1.18
VPS25-204ENST00000589577 FOCADQ5VW36 1801 aa7.68□□□□□ -1.18
VPS25-204ENST00000589577 SLC15A5A6NIM6 579 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 USP17L5A8MUK1 530 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 F6X3S4 739 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 GRM8O00222 908 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 PQBP1O60828 265 aaKnown RBP7.67□□□□□ -1.18
VPS25-204ENST00000589577 MYCNP04198 464 aaPredicted RBP7.67□□□□□ -1.18
VPS25-204ENST00000589577 PTPREP23469 700 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 BACE1P56817 501 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 FKBP5Q13451 457 aaPredicted RBP7.67□□□□□ -1.18
VPS25-204ENST00000589577 PICALMQ13492 652 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 GRB14Q14449 540 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 CCDC129Q6ZRS4 1044 aa7.67□□□□□ -1.18
VPS25-204ENST00000589577 TSR2Q969E8 191 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms