RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 RRP1BQ14684 758 aaKnown RBP12.93□□□□□ -0.34
ZNF540-205ENST00000587220 SIRT2Q8IXJ6 389 aa12.93□□□□□ -0.34
ZNF540-205ENST00000587220 GINM1Q9NU53 330 aa12.93□□□□□ -0.34
ZNF540-205ENST00000587220 KIAA0100Q14667 2235 aaKnown RBP12.93□□□□□ -0.34
ZNF540-205ENST00000587220 GCLCP48506 637 aaPredicted RBP12.92□□□□□ -0.34
ZNF540-205ENST00000587220 IRX3P78415 501 aaPredicted RBP12.92□□□□□ -0.34
ZNF540-205ENST00000587220 TTC6Q86TZ1 520 aa12.92□□□□□ -0.34
ZNF540-205ENST00000587220 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
ZNF540-205ENST00000587220 COA7Q96BR5 231 aa12.92□□□□□ -0.34
ZNF540-205ENST00000587220 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
ZNF540-205ENST00000587220 DNAJC18Q9H819 358 aa12.92□□□□□ -0.34
ZNF540-205ENST00000587220 SERPINB13Q9UIV8 391 aa12.92□□□□□ -0.34
ZNF540-205ENST00000587220 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
ZNF540-205ENST00000587220 ZBTB21Q9ULJ3 1066 aa12.92□□□□□ -0.34
ZNF540-205ENST00000587220 C19orf81C9J6K1 198 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
ZNF540-205ENST00000587220 PDE6AP16499 860 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 BACE1P56817 501 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 UBXN2AP68543 259 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 FAM110CQ1W6H9 321 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
ZNF540-205ENST00000587220 FEZ1Q99689 392 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 CRNKL1Q9BZJ0 848 aaKnown RBP12.91□□□□□ -0.34
ZNF540-205ENST00000587220 LRRCC1Q9C099 1032 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.34
ZNF540-205ENST00000587220 ASCC2Q9H1I8 757 aaPredicted RBP12.91□□□□□ -0.34
ZNF540-205ENST00000587220 EHD4Q9H223 541 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 NAV1Q8NEY1 1877 aa12.91□□□□□ -0.34
ZNF540-205ENST00000587220 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
ZNF540-205ENST00000587220 ADCY3O60266 1144 aa12.9□□□□□ -0.34
ZNF540-205ENST00000587220 GH2P01242 217 aa12.9□□□□□ -0.34
ZNF540-205ENST00000587220 FLT3LGP49771 235 aa12.9□□□□□ -0.34
ZNF540-205ENST00000587220 SH3D19Q5HYK7 790 aa12.9□□□□□ -0.34
ZNF540-205ENST00000587220 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
ZNF540-205ENST00000587220 PAG1Q9NWQ8 432 aa12.9□□□□□ -0.34
ZNF540-205ENST00000587220 GABRQQ9UN88 632 aa12.9□□□□□ -0.34
ZNF540-205ENST00000587220 CCL5P13501 91 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 ATP5JP18859 108 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 JAG1P78504 1218 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 RAB3GAP1Q15042 981 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 MTFR1Q15390 333 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 ABCB5Q2M3G0 1257 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 SHROOM1Q2M3G4 852 aaPredicted RBP12.89□□□□□ -0.35
ZNF540-205ENST00000587220 CERKLQ49MI3 558 aaPredicted RBP12.89□□□□□ -0.35
ZNF540-205ENST00000587220 NKX2-3Q8TAU0 364 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 RIOK1Q9BRS2 568 aaKnown RBP12.89□□□□□ -0.35
ZNF540-205ENST00000587220 RNF208Q9H0X6 261 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 CABP5Q9NP86 173 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 MCM9Q9NXL9 1143 aa12.89□□□□□ -0.35
ZNF540-205ENST00000587220 ELNP15502 786 aa12.88□□□□□ -0.35
ZNF540-205ENST00000587220 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
ZNF540-205ENST00000587220 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
ZNF540-205ENST00000587220 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
ZNF540-205ENST00000587220 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
ZNF540-205ENST00000587220 EDC3Q96F86 508 aaKnown RBP12.88□□□□□ -0.35
ZNF540-205ENST00000587220 DDRGK1Q96HY6 314 aa12.88□□□□□ -0.35
ZNF540-205ENST00000587220 GPATCH3Q96I76 525 aa12.88□□□□□ -0.35
ZNF540-205ENST00000587220 MPHOSPH10O00566 681 aaKnown RBP12.87□□□□□ -0.35
ZNF540-205ENST00000587220 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
ZNF540-205ENST00000587220 PLCD1P51178 756 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 HERVK_113P62684 666 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 IRF5Q13568 498 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 ZSCAN25Q6NSZ9 544 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 LCORLQ8N3X6 602 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 PXYLP1Q8TE99 480 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 SDR42E1Q8WUS8 393 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 HAUS7Q99871 368 aa12.87□□□□□ -0.35
ZNF540-205ENST00000587220 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
ZNF540-205ENST00000587220 TCRBV5S4A2TA0A5A2 114 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 SMARCA5O60264 1052 aaPredicted RBP12.86□□□□□ -0.35
ZNF540-205ENST00000587220 MBD4O95243 580 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 INHAP05111 366 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 GJB1P08034 283 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 ADD2P35612 726 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 USP14P54578 494 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 GPRC5AQ8NFJ5 357 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 GTF3C2Q8WUA4 911 aaPredicted RBP12.86□□□□□ -0.35
ZNF540-205ENST00000587220 GCC1Q96CN9 775 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 P2RX7Q99572 595 aaKnown RBP12.86□□□□□ -0.35
ZNF540-205ENST00000587220 ARMT1Q9H993 441 aa12.86□□□□□ -0.35
ZNF540-205ENST00000587220 CWC22Q9HCG8 908 aaKnown RBP12.86□□□□□ -0.35
ZNF540-205ENST00000587220 SHMT1P34896 483 aa12.85□□□□□ -0.35
ZNF540-205ENST00000587220 GJA8P48165 433 aa12.85□□□□□ -0.35
ZNF540-205ENST00000587220 PAGR1Q9BTK6 254 aa12.85□□□□□ -0.35
ZNF540-205ENST00000587220 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
ZNF540-205ENST00000587220 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
ZNF540-205ENST00000587220 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
ZNF540-205ENST00000587220 ECHDC1Q9NTX5 307 aa12.85□□□□□ -0.35
ZNF540-205ENST00000587220 MORF4L1Q9UBU8 362 aa12.85□□□□□ -0.35
ZNF540-205ENST00000587220 MYH7P12883 1935 aa12.85□□□□□ -0.35
ZNF540-205ENST00000587220 MYH8P13535 1937 aa12.84□□□□□ -0.35
ZNF540-205ENST00000587220 USP17L15C9J2P7 530 aa12.84□□□□□ -0.35
ZNF540-205ENST00000587220 USP17L13C9JLJ4 530 aa12.84□□□□□ -0.35
ZNF540-205ENST00000587220 USP17L11C9JVI0 530 aa12.84□□□□□ -0.35
ZNF540-205ENST00000587220 USP17L18D6R9N7 530 aa12.84□□□□□ -0.35
ZNF540-205ENST00000587220 USP17L22D6RA61 530 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms