RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
MKS1-213ENST00000585134 RAD50Q92878 1312 aa16.88■□□□□ 0.29
MKS1-213ENST00000585134 HSPA1AP0DMV8 641 aaKnown RBP16.87■□□□□ 0.29
MKS1-213ENST00000585134 HSPA1BP0DMV9 641 aaKnown RBP16.87■□□□□ 0.29
MKS1-213ENST00000585134 PTPRAP18433 802 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 CDK8P49336 464 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 PPATQ06203 517 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 PPARAQ07869 468 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 SREBF2Q12772 1141 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 C16orf86Q6ZW13 317 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 ZHX2Q9Y6X8 837 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
MKS1-213ENST00000585134 CCL15-CCL14A0A0B4J2E2 113 aa16.86■□□□□ 0.29
MKS1-213ENST00000585134 MANSC4A6NHS7 340 aaPredicted RBP16.86■□□□□ 0.29
MKS1-213ENST00000585134 TRIM75PA6NK02 468 aa16.86■□□□□ 0.29
MKS1-213ENST00000585134 IRF6O14896 467 aa16.86■□□□□ 0.29
MKS1-213ENST00000585134 HAND2P61296 217 aa16.86■□□□□ 0.29
MKS1-213ENST00000585134 MAP2K1Q02750 393 aaPredicted RBP16.86■□□□□ 0.29
MKS1-213ENST00000585134 CTDSPL2Q05D32 466 aa16.86■□□□□ 0.29
MKS1-213ENST00000585134 CCL15Q16663 113 aa16.86■□□□□ 0.29
MKS1-213ENST00000585134 TATDN1Q6P1N9 297 aa16.86■□□□□ 0.29
MKS1-213ENST00000585134 PHIPQ8WWQ0 1821 aa16.86■□□□□ 0.29
MKS1-213ENST00000585134 USP17L5A8MUK1 530 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 PRDM1O75626 825 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 ASNSP08243 561 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 AKR1B1P15121 316 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 GTF2A2P52657 109 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 SNAPC2Q13487 334 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 BRI3BPQ8WY22 251 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 BEGAINQ9BUH8 593 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 MKNK2Q9HBH9 465 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
MKS1-213ENST00000585134 CDC45O75419 566 aa16.84■□□□□ 0.29
MKS1-213ENST00000585134 FGAP02671 866 aa16.84■□□□□ 0.29
MKS1-213ENST00000585134 SLC3A2P08195 630 aaKnown RBP16.84■□□□□ 0.29
MKS1-213ENST00000585134 ALX1Q15699 326 aa16.84■□□□□ 0.29
MKS1-213ENST00000585134 GADL1Q6ZQY3 521 aa16.84■□□□□ 0.29
MKS1-213ENST00000585134 AS3MTQ9HBK9 375 aa16.84■□□□□ 0.29
MKS1-213ENST00000585134 TSKSQ9UJT2 592 aa16.84■□□□□ 0.29
MKS1-213ENST00000585134 LAMA4Q16363 1823 aa16.84■□□□□ 0.29
MKS1-213ENST00000585134 IGF2BP3O00425 579 aaKnown RBP eCLIP16.83■□□□□ 0.28
MKS1-213ENST00000585134 SGSM2O43147 1006 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 ZMYM6O95789 1325 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 CETPP11597 493 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 SPP2Q13103 211 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 SEPT2Q15019 361 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 CASC1Q6TDU7 716 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 CLEC10AQ8IUN9 316 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 FEZ1Q99689 392 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 DSCC1Q9BVC3 393 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 WBP1LQ9NX94 342 aa16.83■□□□□ 0.28
MKS1-213ENST00000585134 RASA1P20936 1047 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 PDE4BQ07343 736 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 DGKZQ13574 1117 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 ZYXQ15942 572 aaKnown RBP16.82■□□□□ 0.28
MKS1-213ENST00000585134 ZNF280CQ8ND82 737 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 MS4A4AQ96JQ5 239 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 TOMM22Q9NS69 142 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 GINM1Q9NU53 330 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 KCNH4Q9UQ05 1017 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 AFG3L2Q9Y4W6 797 aa16.82■□□□□ 0.28
MKS1-213ENST00000585134 PTPRFP10586 1907 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 CXCL11O14625 94 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 FOXN1O15353 648 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 TRPA1O75762 1119 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 GUCY1A2P33402 732 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 PTH1RQ03431 593 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 MTMR2Q13614 643 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 RRP12Q5JTH9 1297 aaKnown RBP16.81■□□□□ 0.28
MKS1-213ENST00000585134 TMEM179Q6ZVK1 233 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 IFNL1Q8IU54 200 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 TBC1D10CQ8IV04 446 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 REM2Q8IYK8 340 aaPredicted RBP16.81■□□□□ 0.28
MKS1-213ENST00000585134 CCDC17Q96LX7 622 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 ZNF287Q9HBT7 754 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 INCENPQ9NQS7 918 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 TAOK2Q9UL54 1235 aa16.81■□□□□ 0.28
MKS1-213ENST00000585134 A0A0G2JLL6 359 aaPredicted RBP16.8■□□□□ 0.28
MKS1-213ENST00000585134 BTBD19C9JJ37 291 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 TM4SF4P48230 202 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 HMGCS2P54868 508 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 ICA1Q05084 483 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 PRRT2Q7Z6L0 340 aaPredicted RBP16.8■□□□□ 0.28
MKS1-213ENST00000585134 ZNF444Q8N0Y2 327 aaPredicted RBP16.8■□□□□ 0.28
MKS1-213ENST00000585134 ACER1Q8TDN7 264 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 PTPN18Q99952 460 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 ANO2Q9NQ90 1003 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 RNF186Q9NXI6 227 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 TACC3Q9Y6A5 838 aa16.8■□□□□ 0.28
MKS1-213ENST00000585134 LOC285556D6RIA3 1793 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 TESPA1A2RU30 521 aaPredicted RBP16.79■□□□□ 0.28
MKS1-213ENST00000585134 ZNF213O14771 459 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 INHBEP58166 350 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 FAM47AQ5JRC9 791 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms