RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 CCSER2Q9H7U1 834 aa9.4□□□□□ -0.9
TRAPPC8-212ENST00000584604 REV1Q9UBZ9 1251 aa9.4□□□□□ -0.9
TRAPPC8-212ENST00000584604 PRR19A6NJB7 356 aa9.39□□□□□ -0.91
TRAPPC8-212ENST00000584604 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
TRAPPC8-212ENST00000584604 GRIN3BO60391 1043 aa9.39□□□□□ -0.91
TRAPPC8-212ENST00000584604 FBXL6Q8N531 539 aa9.39□□□□□ -0.91
TRAPPC8-212ENST00000584604 GPRASP2Q96D09 838 aa9.39□□□□□ -0.91
TRAPPC8-212ENST00000584604 PRDM10Q9NQV6 1147 aa9.39□□□□□ -0.91
TRAPPC8-212ENST00000584604 ATG3Q9NT62 314 aa9.39□□□□□ -0.91
TRAPPC8-212ENST00000584604 PCDHB14Q9Y5E9 798 aa9.39□□□□□ -0.91
TRAPPC8-212ENST00000584604 FAM170BA6NMN3 283 aa9.38□□□□□ -0.91
TRAPPC8-212ENST00000584604 CYP27C1Q4G0S4 372 aa9.38□□□□□ -0.91
TRAPPC8-212ENST00000584604 RNF112Q9ULX5 631 aa9.38□□□□□ -0.91
TRAPPC8-212ENST00000584604 FAM87AP0C7U9 286 aa9.37□□□□□ -0.91
TRAPPC8-212ENST00000584604 CLCQ05315 142 aa9.37□□□□□ -0.91
TRAPPC8-212ENST00000584604 MLECQ14165 292 aa9.37□□□□□ -0.91
TRAPPC8-212ENST00000584604 PRAMEF13Q5VWM6 474 aa9.37□□□□□ -0.91
TRAPPC8-212ENST00000584604 DUSP27Q5VZP5 1158 aa9.37□□□□□ -0.91
TRAPPC8-212ENST00000584604 ZNF765Q7L2R6 523 aa9.37□□□□□ -0.91
TRAPPC8-212ENST00000584604 SLFN12Q8IYM2 578 aa9.37□□□□□ -0.91
TRAPPC8-212ENST00000584604 OSBPL1AQ9BXW6 950 aa9.37□□□□□ -0.91
TRAPPC8-212ENST00000584604 SOX9P48436 509 aa9.36□□□□□ -0.91
TRAPPC8-212ENST00000584604 YARSP54577 528 aaKnown RBP9.36□□□□□ -0.91
TRAPPC8-212ENST00000584604 FAM214BQ7L5A3 538 aa9.36□□□□□ -0.91
TRAPPC8-212ENST00000584604 TOP6BLQ8N6T0 577 aa9.36□□□□□ -0.91
TRAPPC8-212ENST00000584604 INPP5FQ9Y2H2 1132 aa9.36□□□□□ -0.91
TRAPPC8-212ENST00000584604 LEFTY1O75610 366 aa9.35□□□□□ -0.91
TRAPPC8-212ENST00000584604 IMPDH2P12268 514 aa9.35□□□□□ -0.91
TRAPPC8-212ENST00000584604 MCM4P33991 863 aa9.35□□□□□ -0.91
TRAPPC8-212ENST00000584604 LRRFIP1Q32MZ4 808 aaKnown RBP9.35□□□□□ -0.91
TRAPPC8-212ENST00000584604 SEC16BQ96JE7 1060 aa9.35□□□□□ -0.91
TRAPPC8-212ENST00000584604 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
TRAPPC8-212ENST00000584604 ZNRF3Q9ULT6 936 aa9.35□□□□□ -0.91
TRAPPC8-212ENST00000584604 SLC22A31A6NKX4 558 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 UPK3BL1B0FP48 263 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 UPK3BL2E5RIL1 263 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 SLITRK5O94991 958 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 EOMESO95936 686 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 TNNI2P48788 182 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 GK5Q6ZS86 529 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 FAM13CQ8NE31 585 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 GINM1Q9NU53 330 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 GMIPQ9P107 970 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 LEMD3Q9Y2U8 911 aa9.34□□□□□ -0.91
TRAPPC8-212ENST00000584604 CHURC1-FNTBB4DL54 471 aa9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 IGF2BP3O00425 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 DNAJA2O60884 412 aa9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 FOSL1P15407 271 aa9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 CDCP2Q5VXM1 449 aa9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 INTS5Q6P9B9 1019 aaKnown RBP9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 CYB5D2Q8WUJ1 264 aa9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 MKNK2Q9HBH9 465 aa9.33□□□□□ -0.92
TRAPPC8-212ENST00000584604 TGFB1P01137 390 aa9.32□□□□□ -0.92
TRAPPC8-212ENST00000584604 LETMD1Q6P1Q0 360 aa9.32□□□□□ -0.92
TRAPPC8-212ENST00000584604 SLC43A3Q8NBI5 491 aa9.32□□□□□ -0.92
TRAPPC8-212ENST00000584604 RBBP8NLQ8NC74 664 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-212ENST00000584604 MIPEPQ99797 713 aa9.32□□□□□ -0.92
TRAPPC8-212ENST00000584604 DPH2Q9BQC3 489 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-212ENST00000584604 TINF2Q9BSI4 451 aa9.32□□□□□ -0.92
TRAPPC8-212ENST00000584604 EFR3BQ9Y2G0 817 aa9.32□□□□□ -0.92
TRAPPC8-212ENST00000584604 GNL2Q13823 731 aaKnown RBP9.31□□□□□ -0.92
TRAPPC8-212ENST00000584604 ZNF746Q6NUN9 644 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC8-212ENST00000584604 DNAJB8Q8NHS0 232 aa9.31□□□□□ -0.92
TRAPPC8-212ENST00000584604 TMEM40Q8WWA1 233 aa9.31□□□□□ -0.92
TRAPPC8-212ENST00000584604 HEXIM2Q96MH2 286 aaKnown RBP9.31□□□□□ -0.92
TRAPPC8-212ENST00000584604 CNNM2Q9H8M5 875 aa9.31□□□□□ -0.92
TRAPPC8-212ENST00000584604 KLHL3Q9UH77 587 aa9.31□□□□□ -0.92
TRAPPC8-212ENST00000584604 GTF2IRD1Q9UHL9 959 aa9.31□□□□□ -0.92
TRAPPC8-212ENST00000584604 COBLO75128 1261 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 GRIK1P39086 918 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 C22orf34Q6ZV56 151 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 RIN3Q8TB24 985 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 PPP1R13LQ8WUF5 828 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 ATG4CQ96DT6 458 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 COX4I2Q96KJ9 171 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 CAPN10Q9HC96 672 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 CEP131Q9UPN4 1083 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 MAPK8IP1Q9UQF2 711 aa9.3□□□□□ -0.92
TRAPPC8-212ENST00000584604 CYP26A1O43174 497 aa9.29□□□□□ -0.92
TRAPPC8-212ENST00000584604 ZC3H6P61129 1189 aaKnown RBP9.29□□□□□ -0.92
TRAPPC8-212ENST00000584604 OVOS1Q6IE37 1185 aa9.29□□□□□ -0.92
TRAPPC8-212ENST00000584604 VPS37DQ86XT2 251 aa9.29□□□□□ -0.92
TRAPPC8-212ENST00000584604 XAGE3Q8WTP9 111 aa9.29□□□□□ -0.92
TRAPPC8-212ENST00000584604 CCDC74BQ96LY2 380 aa9.29□□□□□ -0.92
TRAPPC8-212ENST00000584604 FERD3LQ96RJ6 166 aa9.29□□□□□ -0.92
TRAPPC8-212ENST00000584604 PPT2Q9UMR5 302 aa9.29□□□□□ -0.92
TRAPPC8-212ENST00000584604 RGS13O14921 159 aa9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 CCNFP41002 786 aa9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 ETV3P41162 512 aa9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 CD97P48960 835 aa9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 ARSHQ5FYA8 562 aa9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 INTS3Q68E01 1043 aaKnown RBP9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 NLRC3Q7RTR2 1065 aa9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 TAB3Q8N5C8 712 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 GMLQ99445 158 aa9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 PRDM5Q9NQX1 630 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC8-212ENST00000584604 STRIP2Q9ULQ0 834 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms