RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 CNKSR2Q8WXI2 1034 aa29.17■■■□□ 2.26
MIR3960-201ENST00000583311 CABP5Q9NP86 173 aa29.17■■■□□ 2.26
MIR3960-201ENST00000583311 LAMB1P07942 1786 aa29.16■■■□□ 2.26
MIR3960-201ENST00000583311 ROBO3Q96MS0 1386 aa29.16■■■□□ 2.26
MIR3960-201ENST00000583311 DYNLL2Q96FJ2 89 aa29.16■■■□□ 2.26
MIR3960-201ENST00000583311 BEGAINQ9BUH8 593 aa29.16■■■□□ 2.26
MIR3960-201ENST00000583311 FOXP2O15409 715 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 GDF11O95390 407 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 CDK8P49336 464 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 EVX2Q03828 476 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 SNAPC2Q13487 334 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 RRP1BQ14684 758 aaKnown RBP29.15■■■□□ 2.26
MIR3960-201ENST00000583311 ABCB5Q2M3G0 1257 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 ZIC5Q96T25 663 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 AS3MTQ9HBK9 375 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 ZHX2Q9Y6X8 837 aa29.15■■■□□ 2.26
MIR3960-201ENST00000583311 USP17L5A8MUK1 530 aa29.14■■■□□ 2.26
MIR3960-201ENST00000583311 IRF6O14896 467 aa29.14■■■□□ 2.26
MIR3960-201ENST00000583311 PPARAQ07869 468 aa29.14■■■□□ 2.26
MIR3960-201ENST00000583311 CCDC17Q96LX7 622 aa29.14■■■□□ 2.26
MIR3960-201ENST00000583311 DSCC1Q9BVC3 393 aa29.14■■■□□ 2.26
MIR3960-201ENST00000583311 MKNK2Q9HBH9 465 aa29.14■■■□□ 2.26
MIR3960-201ENST00000583311 ZBTB21Q9ULJ3 1066 aa29.14■■■□□ 2.26
MIR3960-201ENST00000583311 ATAD5Q96QE3 1844 aa29.14■■■□□ 2.26
MIR3960-201ENST00000583311 FGAP02671 866 aa29.13■■■□□ 2.25
MIR3960-201ENST00000583311 TM4SF4P48230 202 aa29.13■■■□□ 2.25
MIR3960-201ENST00000583311 PDE4BQ07343 736 aa29.13■■■□□ 2.25
MIR3960-201ENST00000583311 SLC44A5Q8NCS7 719 aa29.13■■■□□ 2.25
MIR3960-201ENST00000583311 CXCL11O14625 94 aa29.12■■■□□ 2.25
MIR3960-201ENST00000583311 SGSM2O43147 1006 aa29.12■■■□□ 2.25
MIR3960-201ENST00000583311 GH2P01242 217 aa29.12■■■□□ 2.25
MIR3960-201ENST00000583311 CETPP11597 493 aa29.12■■■□□ 2.25
MIR3960-201ENST00000583311 CTNNA3Q9UI47 895 aa29.12■■■□□ 2.25
MIR3960-201ENST00000583311 KCNH4Q9UQ05 1017 aa29.12■■■□□ 2.25
MIR3960-201ENST00000583311 AFG3L2Q9Y4W6 797 aa29.12■■■□□ 2.25
MIR3960-201ENST00000583311 MPHOSPH10O00566 681 aaKnown RBP29.11■■■□□ 2.25
MIR3960-201ENST00000583311 CDC45O75419 566 aa29.11■■■□□ 2.25
MIR3960-201ENST00000583311 OTUD7BQ6GQQ9 843 aa29.11■■■□□ 2.25
MIR3960-201ENST00000583311 ANAPC4Q9UJX5 808 aa29.11■■■□□ 2.25
MIR3960-201ENST00000583311 CA12O43570 354 aa29.1■■■□□ 2.25
MIR3960-201ENST00000583311 ZNF280CQ8ND82 737 aa29.1■■■□□ 2.25
MIR3960-201ENST00000583311 MS4A4AQ96JQ5 239 aa29.1■■■□□ 2.25
MIR3960-201ENST00000583311 WBP1LQ9NX94 342 aa29.1■■■□□ 2.25
MIR3960-201ENST00000583311 MYH8P13535 1937 aa29.1■■■□□ 2.25
MIR3960-201ENST00000583311 CCL15-CCL14A0A0B4J2E2 113 aa29.09■■■□□ 2.25
MIR3960-201ENST00000583311 TESPA1A2RU30 521 aaPredicted RBP29.09■■■□□ 2.25
MIR3960-201ENST00000583311 SMIM22K7EJ46 135 aa29.09■■■□□ 2.25
MIR3960-201ENST00000583311 CCL15Q16663 113 aa29.09■■■□□ 2.25
MIR3960-201ENST00000583311 TMEM179Q6ZVK1 233 aa29.09■■■□□ 2.25
MIR3960-201ENST00000583311 STK11IPQ8N1F8 1099 aa29.09■■■□□ 2.25
MIR3960-201ENST00000583311 WDR18Q9BV38 432 aa29.09■■■□□ 2.25
MIR3960-201ENST00000583311 ALDH1A1P00352 501 aa29.08■■■□□ 2.25
MIR3960-201ENST00000583311 RAB3GAP1Q15042 981 aa29.08■■■□□ 2.25
MIR3960-201ENST00000583311 KIAA1211Q6ZU35 1233 aa29.08■■■□□ 2.25
MIR3960-201ENST00000583311 ZNF444Q8N0Y2 327 aaPredicted RBP29.08■■■□□ 2.25
MIR3960-201ENST00000583311 IL25Q9H293 177 aa29.08■■■□□ 2.25
MIR3960-201ENST00000583311 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.08■■■□□ 2.25
MIR3960-201ENST00000583311 TRIM75PA6NK02 468 aa29.07■■■□□ 2.24
MIR3960-201ENST00000583311 ZNF213O14771 459 aa29.07■■■□□ 2.24
MIR3960-201ENST00000583311 JAG1P78504 1218 aa29.07■■■□□ 2.24
MIR3960-201ENST00000583311 SPP2Q13103 211 aa29.07■■■□□ 2.24
MIR3960-201ENST00000583311 ESYT1Q9BSJ8 1104 aa29.07■■■□□ 2.24
MIR3960-201ENST00000583311 AKR1B1P15121 316 aa29.06■■■□□ 2.24
MIR3960-201ENST00000583311 IMMTQ16891 758 aaKnown RBP29.06■■■□□ 2.24
MIR3960-201ENST00000583311 FASTKD5Q7L8L6 764 aaKnown RBP29.06■■■□□ 2.24
MIR3960-201ENST00000583311 CCDC84Q86UT8 332 aaPredicted RBP29.06■■■□□ 2.24
MIR3960-201ENST00000583311 IFNL1Q8IU54 200 aa29.06■■■□□ 2.24
MIR3960-201ENST00000583311 SAGE1Q9NXZ1 904 aa29.06■■■□□ 2.24
MIR3960-201ENST00000583311 PHIPQ8WWQ0 1821 aa29.06■■■□□ 2.24
MIR3960-201ENST00000583311 A0A0G2JLL6 359 aaPredicted RBP29.05■■■□□ 2.24
MIR3960-201ENST00000583311 PCP11498 1178 aaKnown RBP29.05■■■□□ 2.24
MIR3960-201ENST00000583311 RASA1P20936 1047 aa29.05■■■□□ 2.24
MIR3960-201ENST00000583311 CTDSPL2Q05D32 466 aa29.05■■■□□ 2.24
MIR3960-201ENST00000583311 SHROOM1Q2M3G4 852 aaPredicted RBP29.05■■■□□ 2.24
MIR3960-201ENST00000583311 PRRT2Q7Z6L0 340 aaPredicted RBP29.05■■■□□ 2.24
MIR3960-201ENST00000583311 BRI3BPQ8WY22 251 aa29.05■■■□□ 2.24
MIR3960-201ENST00000583311 HSPA1AP0DMV8 641 aaKnown RBP29.04■■■□□ 2.24
MIR3960-201ENST00000583311 HSPA1BP0DMV9 641 aaKnown RBP29.04■■■□□ 2.24
MIR3960-201ENST00000583311 SEPT2Q15019 361 aa29.04■■■□□ 2.24
MIR3960-201ENST00000583311 RNF41Q9H4P4 317 aaPredicted RBP29.04■■■□□ 2.24
MIR3960-201ENST00000583311 ZCCHC17Q9NP64 241 aaKnown RBP29.04■■■□□ 2.24
MIR3960-201ENST00000583311 C19orf81C9J6K1 198 aa29.03■■■□□ 2.24
MIR3960-201ENST00000583311 USP17L10C9JJH3 530 aa29.03■■■□□ 2.24
MIR3960-201ENST00000583311 FEZ1Q99689 392 aa29.03■■■□□ 2.24
MIR3960-201ENST00000583311 U3KPZ7 1027 aaPredicted RBP29.03■■■□□ 2.24
MIR3960-201ENST00000583311 PRDM1O75626 825 aa29.02■■■□□ 2.24
MIR3960-201ENST00000583311 GUCY1A2P33402 732 aa29.02■■■□□ 2.24
MIR3960-201ENST00000583311 BACE1P56817 501 aa29.02■■■□□ 2.24
MIR3960-201ENST00000583311 HAND2P61296 217 aa29.02■■■□□ 2.24
MIR3960-201ENST00000583311 KANSL2Q9H9L4 492 aa29.02■■■□□ 2.24
MIR3960-201ENST00000583311 RNF186Q9NXI6 227 aa29.02■■■□□ 2.24
MIR3960-201ENST00000583311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.02■■■□□ 2.24
MIR3960-201ENST00000583311 IGF2BP3O00425 579 aaKnown RBP eCLIP29.01■■■□□ 2.23
MIR3960-201ENST00000583311 ORC4O43929 436 aa29.01■■■□□ 2.23
MIR3960-201ENST00000583311 NT5C2P49902 561 aa29.01■■■□□ 2.23
MIR3960-201ENST00000583311 AKNAD1Q5T1N1 836 aa29.01■■■□□ 2.23
MIR3960-201ENST00000583311 GADL1Q6ZQY3 521 aa29.01■■■□□ 2.23
MIR3960-201ENST00000583311 MFSD6Q6ZSS7 791 aa29.01■■■□□ 2.23
MIR3960-201ENST00000583311 PROCA1Q8NCQ7 364 aaPredicted RBP29.01■■■□□ 2.23
MIR3960-201ENST00000583311 PTPN18Q99952 460 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms