RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SMAD2	Q15796	467 aa	Known RBP	6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	SPDYE2	Q495Y8	402 aa		6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	KIF6	Q6ZMV9	814 aa		6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	FASTKD5	Q7L8L6	764 aa	Known RBP	6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	ZGPAT	Q8N5A5	531 aa	Known RBP	6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	PRMT6	Q96LA8	375 aa	Predicted RBP	6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	TMEM39A	Q9NV64	488 aa		6.8	□□□□□ -1.32
MSI2-216	ENST00000582772	CA3	P07451	260 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	HCLS1	P14317	486 aa	Predicted RBP	6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	MYOG	P15173	224 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	PML	P29590	882 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	RABGGTB	P53611	331 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	FAAP100	Q0VG06	881 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	LRRC41	Q15345	812 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	SULT6B1	Q6IMI4	303 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	CRIPAK	Q8N1N5	446 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	ANKRD13C	Q8N6S4	541 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	RUBCN	Q92622	972 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	NUDT12	Q9BQG2	462 aa		6.79	□□□□□ -1.32
MSI2-216	ENST00000582772	XDH	P47989	1333 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	SALL1	Q9NSC2	1324 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	CSF2RA	P15509	400 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	CYP2B6	P20813	491 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	GCLC	P48506	637 aa	Predicted RBP	6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	RPS8	P62241	208 aa	Known RBP	6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	TAP1	Q03518	808 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	TEF	Q10587	303 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	NOL9	Q5SY16	702 aa	Known RBP	6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	GJC2	Q5T442	439 aa	Predicted RBP	6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	ZFPM1	Q8IX07	1006 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	TMEM199	Q8N511	208 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	ADAM32	Q8TC27	787 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	COA1	Q9GZY4	146 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	ANKIB1	Q9P2G1	1089 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	PCDHAC2	Q9Y5I4	1007 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	ZNF236	Q9UL36	1845 aa		6.78	□□□□□ -1.32
MSI2-216	ENST00000582772	C2CD3	Q4AC94	2353 aa		6.77	□□□□□ -1.32
MSI2-216	ENST00000582772	FBN2	P35556	2912 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772		A0A1B0GUL7	405 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	PRR5-ARHGAP8	B1AHC4	643 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	ARHGAP8	P85298	464 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	CFAP100	Q494V2	611 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	TMEM67	Q5HYA8	995 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	TTLL7	Q6ZT98	887 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	HOOK2	Q96ED9	719 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	APBA2	Q99767	749 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	IL23A	Q9NPF7	189 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	PHF24	Q9UPV7	400 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	ADAMTS20	P59510	1910 aa		6.77	□□□□□ -1.33
MSI2-216	ENST00000582772	KCNQ3	O43525	872 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	IGHA2	P01877	340 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	ATP2B4	P23634	1241 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	ADCYAP1R1	P41586	468 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	EVX2	Q03828	476 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	CBX2	Q14781	532 aa	Predicted RBP	6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	TTLL5	Q6EMB2	1281 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	GPR161	Q8N6U8	529 aa	Known RBP	6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	TMEM105	Q8N8V8	129 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	ARNTL2	Q8WYA1	636 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	HAUS7	Q99871	368 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	TMEM39B	Q9GZU3	492 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	MORF4L1	Q9UBU8	362 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	ZNF112	Q9UJU3	913 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	CDK5RAP2	Q96SN8	1893 aa		6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	UBR5	O95071	2799 aa	Predicted RBP	6.76	□□□□□ -1.33
MSI2-216	ENST00000582772	TMEM8B	A6NDV4	472 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	DCDC2C	A8MYV0	355 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772		H3BQ06	376 aa	Predicted RBP	6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	PQBP1	O60828	265 aa	Known RBP	6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	FGB	P02675	491 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	RGS2	P41220	211 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	CCL14	Q16627	93 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	MTHFSD	Q2M296	383 aa	Known RBP	6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	PPM1J	Q5JR12	505 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	IL17RE	Q8NFR9	667 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	TDRD7	Q8NHU6	1098 aa	Known RBP	6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	PABPC5	Q96DU9	382 aa	Known RBP	6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	RIPOR3	Q96MK2	946 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	ZBTB3	Q9H5J0	574 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	CERS4	Q9HA82	394 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	SPINK5	Q9NQ38	1064 aa	Predicted RBP	6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	ZNF70	Q9UC06	446 aa	Predicted RBP	6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	CDV3	Q9UKY7	258 aa	Known RBP	6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	PNMA3	Q9UL41	463 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	PCDHGC5	Q9Y5F6	944 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	SLC4A7	Q9Y6M7	1214 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	PTPRS	Q13332	1948 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	DOCK1	Q14185	1865 aa		6.75	□□□□□ -1.33
MSI2-216	ENST00000582772	NBPF19	A0A087WUL8	3843 aa		6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	DCDC2B	A2VCK2	349 aa		6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	SRRM3	A6NNA2	597 aa	Predicted RBP	6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	NTRK1	P04629	796 aa		6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	ACR	P10323	421 aa		6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	ATP2A2	P16615	1042 aa	Known RBP	6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	TNNI2	P48788	182 aa		6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	FKBP1A	P62942	108 aa	Known RBP	6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	MORN1	Q5T089	497 aa		6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	NLRP10	Q86W26	655 aa		6.74	□□□□□ -1.33
MSI2-216	ENST00000582772	CERS5	Q8N5B7	392 aa		6.74	□□□□□ -1.33

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms