RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
GGA3-210ENST00000580799 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
GGA3-210ENST00000580799 USP17L10C9JJH3 530 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 BCAR3O75815 825 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 CYP2E1P05181 493 aaPredicted RBP12.59□□□□□ -0.39
GGA3-210ENST00000580799 MAPK4P31152 587 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 HERVK_113P62684 666 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 MAPKAPK5Q8IW41 473 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 GPRC5AQ8NFJ5 357 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 SSH3Q8TE77 659 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 GTF3C2Q8WUA4 911 aaPredicted RBP12.59□□□□□ -0.39
GGA3-210ENST00000580799 CLUAP1Q96AJ1 413 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 P2RX7Q99572 595 aaKnown RBP12.59□□□□□ -0.39
GGA3-210ENST00000580799 NUDT12Q9BQG2 462 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 DBNDD2Q9BQY9 259 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 DNAJC18Q9H819 358 aa12.59□□□□□ -0.39
GGA3-210ENST00000580799 HLA-DOAP06340 250 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 BMP8BP34820 402 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 PDE3AQ14432 1141 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 MAP3K21Q5TCX8 1036 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 ZKSCAN2Q63HK3 967 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 TMED8Q6PL24 325 aaPredicted RBP12.58□□□□□ -0.4
GGA3-210ENST00000580799 ADGRA1Q86SQ6 560 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 DIS3LQ8TF46 1054 aaKnown RBP12.58□□□□□ -0.4
GGA3-210ENST00000580799 TRIB2Q92519 343 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 PALD1Q9ULE6 856 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 ZBTB21Q9ULJ3 1066 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 TNNQ9UQP3 1299 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 SZT2Q5T011 3432 aa12.58□□□□□ -0.4
GGA3-210ENST00000580799 MYO5AQ9Y4I1 1855 aaKnown RBP12.57□□□□□ -0.4
GGA3-210ENST00000580799 SURF6O75683 361 aaKnown RBP12.57□□□□□ -0.4
GGA3-210ENST00000580799 JAG1P78504 1218 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 ATP8B2P98198 1209 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 TRIM32Q13049 653 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
GGA3-210ENST00000580799 TMEM57Q8N5G2 664 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 GDF15Q99988 308 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 TXNRD2Q9NNW7 524 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 RBPJLQ9UBG7 517 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 STAP2Q9UGK3 403 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 OGDHLQ9ULD0 1010 aa12.57□□□□□ -0.4
GGA3-210ENST00000580799 MYH1P12882 1939 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 GDF11O95390 407 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
GGA3-210ENST00000580799 CYP2B6P20813 491 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 ZAP70P43403 619 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 ERVK-24P63145 666 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 EHD4Q9H223 541 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 C11orf49Q9H6J7 331 aa12.56□□□□□ -0.4
GGA3-210ENST00000580799 PIH1D3Q9NQM4 214 aaKnown RBP12.56□□□□□ -0.4
GGA3-210ENST00000580799 NOP58Q9Y2X3 529 aaKnown RBP12.56□□□□□ -0.4
GGA3-210ENST00000580799 ZKSCAN1P17029 563 aaPredicted RBP12.55□□□□□ -0.4
GGA3-210ENST00000580799 CYP7A1P22680 504 aa12.55□□□□□ -0.4
GGA3-210ENST00000580799 RGS2P41220 211 aa12.55□□□□□ -0.4
GGA3-210ENST00000580799 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
GGA3-210ENST00000580799 TATDN1Q6P1N9 297 aa12.55□□□□□ -0.4
GGA3-210ENST00000580799 USP6NLQ92738 828 aa12.55□□□□□ -0.4
GGA3-210ENST00000580799 C12orf42Q96LP6 360 aa12.55□□□□□ -0.4
GGA3-210ENST00000580799 APBA2Q99767 749 aa12.55□□□□□ -0.4
GGA3-210ENST00000580799 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
GGA3-210ENST00000580799 SAP30BPQ9UHR5 308 aaKnown RBP12.55□□□□□ -0.4
GGA3-210ENST00000580799 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
GGA3-210ENST00000580799 SOX1O00570 391 aaPredicted RBP12.54□□□□□ -0.4
GGA3-210ENST00000580799 IDH1O75874 414 aaKnown RBP12.54□□□□□ -0.4
GGA3-210ENST00000580799 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
GGA3-210ENST00000580799 GH2P01242 217 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 USP14P54578 494 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
GGA3-210ENST00000580799 CCNA1P78396 465 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 CACNB2Q08289 660 aaPredicted RBP12.54□□□□□ -0.4
GGA3-210ENST00000580799 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
GGA3-210ENST00000580799 MORN1Q5T089 497 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 GPR142Q7Z601 462 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 PLEKHH3Q7Z736 793 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
GGA3-210ENST00000580799 PAGR1Q9BTK6 254 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 KIAA1683Q9H0B3 1180 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 PORCNQ9H237 461 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 CWC22Q9HCG8 908 aaKnown RBP12.54□□□□□ -0.4
GGA3-210ENST00000580799 SERPINB13Q9UIV8 391 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
GGA3-210ENST00000580799 USP17L15C9J2P7 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP17L13C9JLJ4 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP17L11C9JVI0 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP17L18D6R9N7 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP17L22D6RA61 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP17L17D6RBQ6 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP17L19D6RCP7 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP17L20D6RJB6 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 COL6A1P12109 1028 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP5P45974 858 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 USP17L24Q0WX57 530 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 MAP3K12Q12852 859 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 Q3C1V9 767 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
GGA3-210ENST00000580799 EAF2Q96CJ1 260 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms