RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 ARHGAP39Q9C0H5 1083 aa32.36■■■□□ 2.77
LINC00271-207ENST00000580741 PUS7LQ9H0K6 701 aaKnown RBP32.36■■■□□ 2.77
LINC00271-207ENST00000580741 AS3MTQ9HBK9 375 aa32.36■■■□□ 2.77
LINC00271-207ENST00000580741 GCC1Q96CN9 775 aa32.35■■■□□ 2.77
LINC00271-207ENST00000580741 TBC1D2Q9BYX2 928 aa32.35■■■□□ 2.77
LINC00271-207ENST00000580741 ZBTB47Q9UFB7 747 aaPredicted RBP32.35■■■□□ 2.77
LINC00271-207ENST00000580741 AGTPBP1Q9UPW5 1226 aa32.35■■■□□ 2.77
LINC00271-207ENST00000580741 GH2P01242 217 aa32.34■■■□□ 2.77
LINC00271-207ENST00000580741 MX1P20591 662 aa32.34■■■□□ 2.77
LINC00271-207ENST00000580741 TATDN1Q6P1N9 297 aa32.34■■■□□ 2.77
LINC00271-207ENST00000580741 HTTP42858 3142 aa32.33■■■□□ 2.77
LINC00271-207ENST00000580741 ZSWIM8A7E2V4 1837 aa32.33■■■□□ 2.77
LINC00271-207ENST00000580741 ERC2O15083 957 aa32.33■■■□□ 2.77
LINC00271-207ENST00000580741 LACTBP83111 547 aaPredicted RBP32.33■■■□□ 2.77
LINC00271-207ENST00000580741 MTMR2Q13614 643 aa32.33■■■□□ 2.77
LINC00271-207ENST00000580741 AAMPQ13685 434 aa32.33■■■□□ 2.77
LINC00271-207ENST00000580741 WDR18Q9BV38 432 aa32.33■■■□□ 2.77
LINC00271-207ENST00000580741 PTPN22Q9Y2R2 807 aa32.33■■■□□ 2.77
LINC00271-207ENST00000580741 SALL3Q9BXA9 1300 aa32.32■■■□□ 2.76
LINC00271-207ENST00000580741 GLRX3O76003 335 aaKnown RBP32.32■■■□□ 2.76
LINC00271-207ENST00000580741 SHMT1P34896 483 aa32.32■■■□□ 2.76
LINC00271-207ENST00000580741 SLC45A1Q9Y2W3 748 aa32.32■■■□□ 2.76
LINC00271-207ENST00000580741 SOX10P56693 466 aa32.31■■■□□ 2.76
LINC00271-207ENST00000580741 GABPAQ06546 454 aa32.31■■■□□ 2.76
LINC00271-207ENST00000580741 CERKLQ49MI3 558 aaPredicted RBP32.31■■■□□ 2.76
LINC00271-207ENST00000580741 PROCA1Q8NCQ7 364 aaPredicted RBP32.31■■■□□ 2.76
LINC00271-207ENST00000580741 ATP8A2Q9NTI2 1148 aa32.31■■■□□ 2.76
LINC00271-207ENST00000580741 GINM1Q9NU53 330 aa32.31■■■□□ 2.76
LINC00271-207ENST00000580741 SLC4A4Q9Y6R1 1079 aa32.31■■■□□ 2.76
LINC00271-207ENST00000580741 KIF22Q14807 665 aa32.3■■■□□ 2.76
LINC00271-207ENST00000580741 OSBP2Q969R2 916 aa32.3■■■□□ 2.76
LINC00271-207ENST00000580741 CYP2D7A0A087X1C5 515 aa32.29■■■□□ 2.76
LINC00271-207ENST00000580741 RNF113AO15541 343 aaKnown RBP32.29■■■□□ 2.76
LINC00271-207ENST00000580741 BCRP11274 1271 aa32.29■■■□□ 2.76
LINC00271-207ENST00000580741 CTGFP29279 349 aa32.29■■■□□ 2.76
LINC00271-207ENST00000580741 BACE1P56817 501 aa32.29■■■□□ 2.76
LINC00271-207ENST00000580741 SH3D19Q5HYK7 790 aa32.29■■■□□ 2.76
LINC00271-207ENST00000580741 SLC44A5Q8NCS7 719 aa32.29■■■□□ 2.76
LINC00271-207ENST00000580741 LOC285556D6RIA3 1793 aa32.29■■■□□ 2.76
LINC00271-207ENST00000580741 SMIM22K7EJ46 135 aa32.28■■■□□ 2.76
LINC00271-207ENST00000580741 ABCB5Q2M3G0 1257 aa32.28■■■□□ 2.76
LINC00271-207ENST00000580741 SMCR8Q8TEV9 937 aaPredicted RBP32.28■■■□□ 2.76
LINC00271-207ENST00000580741 APPBP2Q92624 585 aa32.28■■■□□ 2.76
LINC00271-207ENST00000580741 DYNLL2Q96FJ2 89 aa32.28■■■□□ 2.76
LINC00271-207ENST00000580741 RWDD1Q9H446 243 aaPredicted RBP32.28■■■□□ 2.76
LINC00271-207ENST00000580741 IGHDP01880 384 aa32.27■■■□□ 2.76
LINC00271-207ENST00000580741 RAB3GAP1Q15042 981 aa32.27■■■□□ 2.76
LINC00271-207ENST00000580741 ARHGEF6Q15052 776 aa32.27■■■□□ 2.76
LINC00271-207ENST00000580741 STRBPQ96SI9 672 aaKnown RBP32.27■■■□□ 2.76
LINC00271-207ENST00000580741 LNPKQ9C0E8 428 aa32.27■■■□□ 2.76
LINC00271-207ENST00000580741 BAZ2AQ9UIF9 1905 aaKnown RBP32.27■■■□□ 2.76
LINC00271-207ENST00000580741 USP17L10C9JJH3 530 aa32.26■■■□□ 2.75
LINC00271-207ENST00000580741 IRX6P78412 446 aaPredicted RBP32.26■■■□□ 2.75
LINC00271-207ENST00000580741 B4GALNT3Q6L9W6 998 aa32.26■■■□□ 2.75
LINC00271-207ENST00000580741 TMOD4Q9NZQ9 345 aa32.26■■■□□ 2.75
LINC00271-207ENST00000580741 PTCH2Q9Y6C5 1203 aa32.26■■■□□ 2.75
LINC00271-207ENST00000580741 USP17L12C9JPN9 530 aa32.25■■■□□ 2.75
LINC00271-207ENST00000580741 USP17L21D6R901 530 aa32.25■■■□□ 2.75
LINC00271-207ENST00000580741 ZFYP08048 801 aaPredicted RBP32.25■■■□□ 2.75
LINC00271-207ENST00000580741 PSMC4P43686 418 aa32.25■■■□□ 2.75
LINC00271-207ENST00000580741 TRIM47Q96LD4 638 aa32.25■■■□□ 2.75
LINC00271-207ENST00000580741 FSD1Q9BTV5 496 aa32.25■■■□□ 2.75
LINC00271-207ENST00000580741 PNMA3Q9UL41 463 aa32.25■■■□□ 2.75
LINC00271-207ENST00000580741 M0R2C6 588 aa32.24■■■□□ 2.75
LINC00271-207ENST00000580741 ZYXQ15942 572 aaKnown RBP32.24■■■□□ 2.75
LINC00271-207ENST00000580741 SMC5Q8IY18 1101 aa32.24■■■□□ 2.75
LINC00271-207ENST00000580741 DDRGK1Q96HY6 314 aa32.24■■■□□ 2.75
LINC00271-207ENST00000580741 CABP5Q9NP86 173 aa32.24■■■□□ 2.75
LINC00271-207ENST00000580741 C19orf81C9J6K1 198 aa32.23■■■□□ 2.75
LINC00271-207ENST00000580741 GUCY1A2P33402 732 aa32.23■■■□□ 2.75
LINC00271-207ENST00000580741 PDE1AP54750 535 aa32.23■■■□□ 2.75
LINC00271-207ENST00000580741 C12orf60Q5U649 245 aa32.23■■■□□ 2.75
LINC00271-207ENST00000580741 MPHOSPH10O00566 681 aaKnown RBP32.22■■■□□ 2.75
LINC00271-207ENST00000580741 GPAA1O43292 621 aa32.22■■■□□ 2.75
LINC00271-207ENST00000580741 FMNL1O95466 1100 aaPredicted RBP32.22■■■□□ 2.75
LINC00271-207ENST00000580741 PABPC4Q13310 644 aaKnown RBP eCLIP32.22■■■□□ 2.75
LINC00271-207ENST00000580741 SEPT2Q15019 361 aa32.22■■■□□ 2.75
LINC00271-207ENST00000580741 AMOTL1Q8IY63 956 aa32.22■■■□□ 2.75
LINC00271-207ENST00000580741 ACER1Q8TDN7 264 aa32.22■■■□□ 2.75
LINC00271-207ENST00000580741 FEZ1Q99689 392 aa32.22■■■□□ 2.75
LINC00271-207ENST00000580741 ASCC2Q9H1I8 757 aaPredicted RBP32.22■■■□□ 2.75
LINC00271-207ENST00000580741 EMILIN3Q9NT22 766 aa32.22■■■□□ 2.75
LINC00271-207ENST00000580741 STAP2Q9UGK3 403 aa32.22■■■□□ 2.75
LINC00271-207ENST00000580741 CENPFP49454 3210 aa32.21■■■□□ 2.75
LINC00271-207ENST00000580741 OSBPP22059 807 aa32.21■■■□□ 2.75
LINC00271-207ENST00000580741 CTR9Q6PD62 1173 aa32.21■■■□□ 2.75
LINC00271-207ENST00000580741 ANKRD13CQ8N6S4 541 aa32.21■■■□□ 2.75
LINC00271-207ENST00000580741 SEC62Q99442 399 aaKnown RBP32.21■■■□□ 2.75
LINC00271-207ENST00000580741 SWAP70Q9UH65 585 aa32.21■■■□□ 2.75
LINC00271-207ENST00000580741 GSG1L2A8MUP6 293 aa32.2■■■□□ 2.75
LINC00271-207ENST00000580741 LRRFIP1Q32MZ4 808 aaKnown RBP32.2■■■□□ 2.75
LINC00271-207ENST00000580741 USP17L2Q6R6M4 530 aa32.19■■■□□ 2.74
LINC00271-207ENST00000580741 AKR1B1P15121 316 aa32.18■■■□□ 2.74
LINC00271-207ENST00000580741 CDK8P49336 464 aa32.18■■■□□ 2.74
LINC00271-207ENST00000580741 RGS19P49795 217 aa32.18■■■□□ 2.74
LINC00271-207ENST00000580741 IRX3P78415 501 aaPredicted RBP32.18■■■□□ 2.74
LINC00271-207ENST00000580741 EPB41L4AQ9HCS5 686 aaPredicted RBP32.18■■■□□ 2.74
LINC00271-207ENST00000580741 GNRH1P01148 92 aa32.17■■■□□ 2.74
LINC00271-207ENST00000580741 FCGRTP55899 365 aa32.17■■■□□ 2.74
LINC00271-207ENST00000580741 C16orf86Q6ZW13 317 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms