RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 BTBD19C9JJ37 291 aa19.67■□□□□ 0.74
IFT20-210ENST00000580357 USP17L12C9JPN9 530 aa19.67■□□□□ 0.74
IFT20-210ENST00000580357 USP17L21D6R901 530 aa19.67■□□□□ 0.74
IFT20-210ENST00000580357 GABPAQ06546 454 aa19.67■□□□□ 0.74
IFT20-210ENST00000580357 SBK1Q52WX2 424 aa19.67■□□□□ 0.74
IFT20-210ENST00000580357 PRRT2Q7Z6L0 340 aaPredicted RBP19.67■□□□□ 0.74
IFT20-210ENST00000580357 ARPP21Q9UBL0 812 aaPredicted RBP19.67■□□□□ 0.74
IFT20-210ENST00000580357 LAMB1P07942 1786 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 GSG1L2A8MUP6 293 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 C19orf81C9J6K1 198 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 HIP1O00291 1037 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 APPP05067 770 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 SPP2Q13103 211 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 RRP1BQ14684 758 aaKnown RBP19.66■□□□□ 0.74
IFT20-210ENST00000580357 TAF1CQ15572 869 aaPredicted RBP19.66■□□□□ 0.74
IFT20-210ENST00000580357 SLC4A8Q2Y0W8 1093 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 CTR9Q6PD62 1173 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 CCDC17Q96LX7 622 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 SLC45A1Q9Y2W3 748 aa19.66■□□□□ 0.74
IFT20-210ENST00000580357 FKTNO75072 461 aa19.65■□□□□ 0.74
IFT20-210ENST00000580357 NEFLP07196 543 aa19.65■□□□□ 0.74
IFT20-210ENST00000580357 ABCB5Q2M3G0 1257 aa19.65■□□□□ 0.74
IFT20-210ENST00000580357 FAM43AQ8N2R8 423 aa19.65■□□□□ 0.74
IFT20-210ENST00000580357 PROCA1Q8NCQ7 364 aaPredicted RBP19.65■□□□□ 0.74
IFT20-210ENST00000580357 TRIM75PA6NK02 468 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 M0R2C6 588 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 PDHXO00330 501 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 MFAP1P55081 439 aaKnown RBP19.64■□□□□ 0.73
IFT20-210ENST00000580357 CRHR2Q13324 411 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 ARHGEF6Q15052 776 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 MCMDC2Q4G0Z9 681 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 SH3D19Q5HYK7 790 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 ZNF287Q9HBT7 754 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 ZBTB21Q9ULJ3 1066 aa19.64■□□□□ 0.73
IFT20-210ENST00000580357 USP17L10C9JJH3 530 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 GDF11O95390 407 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 GH2P01242 217 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 SHMT1P34896 483 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 TDO2P48775 406 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 PABPC4Q13310 644 aaKnown RBP eCLIP19.63■□□□□ 0.73
IFT20-210ENST00000580357 MOGSQ13724 837 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 GADL1Q6ZQY3 521 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 C16orf86Q6ZW13 317 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 CENPQQ7L2Z9 268 aaPredicted RBP19.63■□□□□ 0.73
IFT20-210ENST00000580357 IFNL3Q8IZI9 196 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 ZNF296Q8WUU4 475 aaPredicted RBP19.63■□□□□ 0.73
IFT20-210ENST00000580357 PCDH10Q9P2E7 1040 aa19.63■□□□□ 0.73
IFT20-210ENST00000580357 DOCK1Q14185 1865 aa19.62■□□□□ 0.73
IFT20-210ENST00000580357 TLR2O60603 784 aa19.62■□□□□ 0.73
IFT20-210ENST00000580357 CYP2D6P10635 497 aa19.62■□□□□ 0.73
IFT20-210ENST00000580357 SDSP20132 328 aa19.62■□□□□ 0.73
IFT20-210ENST00000580357 CDK8P49336 464 aa19.62■□□□□ 0.73
IFT20-210ENST00000580357 BACE1P56817 501 aa19.62■□□□□ 0.73
IFT20-210ENST00000580357 PKN2Q16513 984 aaKnown RBP19.62■□□□□ 0.73
IFT20-210ENST00000580357 GPAT2Q6NUI2 795 aa19.62■□□□□ 0.73
IFT20-210ENST00000580357 SEC62Q99442 399 aaKnown RBP19.62■□□□□ 0.73
IFT20-210ENST00000580357 TMOD4Q9NZQ9 345 aa19.62■□□□□ 0.73
IFT20-210ENST00000580357 SLC3A2P08195 630 aaKnown RBP19.61■□□□□ 0.73
IFT20-210ENST00000580357 PDE4AP27815 886 aa19.61■□□□□ 0.73
IFT20-210ENST00000580357 SP3Q02447 781 aa19.61■□□□□ 0.73
IFT20-210ENST00000580357 ERO1AQ96HE7 468 aa19.61■□□□□ 0.73
IFT20-210ENST00000580357 R3HDMLQ9H3Y0 253 aa19.61■□□□□ 0.73
IFT20-210ENST00000580357 AGTPBP1Q9UPW5 1226 aa19.61■□□□□ 0.73
IFT20-210ENST00000580357 MINDY4BA8MYZ0 360 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 USP14P54578 494 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 JAG1P78504 1218 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 RAB3GAP1Q15042 981 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 USP17L2Q6R6M4 530 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 TMEM179Q6ZVK1 233 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 DYNLL2Q96FJ2 89 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 PARK7Q99497 189 aaKnown RBP19.6■□□□□ 0.73
IFT20-210ENST00000580357 NAPBQ9H115 298 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 MKNK2Q9HBH9 465 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 PNMA3Q9UL41 463 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 SIPA1L1O43166 1804 aa19.6■□□□□ 0.73
IFT20-210ENST00000580357 MPHOSPH10O00566 681 aaKnown RBP19.59■□□□□ 0.73
IFT20-210ENST00000580357 OSBPP22059 807 aa19.59■□□□□ 0.73
IFT20-210ENST00000580357 RGS19P49795 217 aa19.59■□□□□ 0.73
IFT20-210ENST00000580357 ALX1Q15699 326 aa19.59■□□□□ 0.73
IFT20-210ENST00000580357 TTC22Q5TAA0 569 aa19.59■□□□□ 0.73
IFT20-210ENST00000580357 CTU1Q7Z7A3 348 aaKnown RBP19.59■□□□□ 0.73
IFT20-210ENST00000580357 CCDC84Q86UT8 332 aaPredicted RBP19.59■□□□□ 0.73
IFT20-210ENST00000580357 DIAPH3Q9NSV4 1193 aa19.59■□□□□ 0.73
IFT20-210ENST00000580357 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.59■□□□□ 0.73
IFT20-210ENST00000580357 NAV1Q8NEY1 1877 aa19.58■□□□□ 0.73
IFT20-210ENST00000580357 CASP8AP2Q9UKL3 1982 aa19.58■□□□□ 0.73
IFT20-210ENST00000580357 CYP2D7A0A087X1C5 515 aa19.58■□□□□ 0.72
IFT20-210ENST00000580357 HMGCS2P54868 508 aa19.58■□□□□ 0.72
IFT20-210ENST00000580357 KIF22Q14807 665 aa19.58■□□□□ 0.72
IFT20-210ENST00000580357 ERICH6BQ5W0A0 696 aa19.58■□□□□ 0.72
IFT20-210ENST00000580357 FAM227BQ96M60 508 aa19.58■□□□□ 0.72
IFT20-210ENST00000580357 KIAA1683Q9H0B3 1180 aa19.58■□□□□ 0.72
IFT20-210ENST00000580357 HOXA7P31268 230 aaPredicted RBP19.57■□□□□ 0.72
IFT20-210ENST00000580357 PDE4BQ07343 736 aa19.57■□□□□ 0.72
IFT20-210ENST00000580357 NMIQ13287 307 aaPredicted RBP19.57■□□□□ 0.72
IFT20-210ENST00000580357 DGKZQ13574 1117 aa19.57■□□□□ 0.72
IFT20-210ENST00000580357 MTMR2Q13614 643 aa19.57■□□□□ 0.72
IFT20-210ENST00000580357 C17orf99Q6UX52 265 aa19.57■□□□□ 0.72
IFT20-210ENST00000580357 ZNF444Q8N0Y2 327 aaPredicted RBP19.57■□□□□ 0.72
IFT20-210ENST00000580357 CCDC136Q96JN2 1154 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms