RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 PPATQ06203 517 aa18.48■□□□□ 0.55
SLC6A4-205ENST00000579221 RASAL3Q86YV0 1011 aa18.48■□□□□ 0.55
SLC6A4-205ENST00000579221 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
SLC6A4-205ENST00000579221 SPDYE5A6NIY4 337 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 MPHOSPH10O00566 681 aaKnown RBP18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 GDF11O95390 407 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 SLC10A3P09131 477 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 PTPRAP18433 802 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 GRM1Q13255 1194 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 SPRYD7Q5W111 196 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 OPTNQ96CV9 577 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 WNK4Q96J92 1243 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 TBC1D2Q9BYX2 928 aa18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 RNF41Q9H4P4 317 aaPredicted RBP18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 RBM8AQ9Y5S9 174 aaKnown RBP18.47■□□□□ 0.55
SLC6A4-205ENST00000579221 DDX60LQ5H9U9 1706 aaKnown RBP18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 USP17L5A8MUK1 530 aa18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 GH2P01242 217 aa18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 ZBTB48P10074 688 aaPredicted RBP18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 VEGFBP49765 207 aa18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 AKNAD1Q5T1N1 836 aa18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 MFSD6Q6ZSS7 791 aa18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 OTUD5Q96G74 571 aa18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 ZHX2Q9Y6X8 837 aa18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 BAZ2AQ9UIF9 1905 aaKnown RBP18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 WDR33Q9C0J8 1336 aaKnown RBP18.46■□□□□ 0.55
SLC6A4-205ENST00000579221 FAM155AB1AL88 458 aaPredicted RBP18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 PRDM1O75626 825 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 FGRP09769 529 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 RASA1P20936 1047 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 NOGQ13253 232 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 PPIL2Q13356 520 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 TMEM179Q6ZVK1 233 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 STAG1Q8WVM7 1258 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 AS3MTQ9HBK9 375 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 INCENPQ9NQS7 918 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 TOMM22Q9NS69 142 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 ZBTB21Q9ULJ3 1066 aa18.45■□□□□ 0.54
SLC6A4-205ENST00000579221 ORC4O43929 436 aa18.44■□□□□ 0.54
SLC6A4-205ENST00000579221 AKR1B1P15121 316 aa18.44■□□□□ 0.54
SLC6A4-205ENST00000579221 JAG1P78504 1218 aa18.44■□□□□ 0.54
SLC6A4-205ENST00000579221 RAB3GAP1Q15042 981 aa18.44■□□□□ 0.54
SLC6A4-205ENST00000579221 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
SLC6A4-205ENST00000579221 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.44■□□□□ 0.54
SLC6A4-205ENST00000579221 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
SLC6A4-205ENST00000579221 CXCL11O14625 94 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 EPB41L2O43491 1005 aaKnown RBP18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 CYP21A2P08686 494 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 GJA5P36382 358 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 MAP2K2P36507 400 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 NT5C2P49902 561 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 TFAP4Q01664 338 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 MKRN3Q13064 507 aaKnown RBP18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 NECTIN1Q15223 517 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 RRP12Q5JTH9 1297 aaKnown RBP18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 RNF20Q5VTR2 975 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 TBC1D10CQ8IV04 446 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 REM2Q8IYK8 340 aaPredicted RBP18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 DNAJC5GQ8N7S2 189 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 AFG3L2Q9Y4W6 797 aa18.43■□□□□ 0.54
SLC6A4-205ENST00000579221 TSPY2A6NKD2 308 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 IRF6O14896 467 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 RANBP6O60518 1105 aaKnown RBP18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 TSPY3P0CV98 308 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 TSPY8P0CW00 308 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 GUCY1A2P33402 732 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 GTF2A2P52657 109 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 INHBEP58166 350 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 SEPT2Q15019 361 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 SHROOM1Q2M3G4 852 aaPredicted RBP18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 ZNF280CQ8ND82 737 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 WDR18Q9BV38 432 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 NBPF3Q9H094 633 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 CNNM2Q9H8M5 875 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 KANSL2Q9H9L4 492 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 TACC3Q9Y6A5 838 aa18.42■□□□□ 0.54
SLC6A4-205ENST00000579221 MANSC4A6NHS7 340 aaPredicted RBP18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 AOC2O75106 756 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 KIF23Q02241 960 aaPredicted RBP18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 TRDNQ13061 729 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 SPP2Q13103 211 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 SNAPC2Q13487 334 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 FAM47AQ5JRC9 791 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 CREB3L3Q68CJ9 461 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 NEDD1Q8NHV4 660 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 ESR2Q92731 530 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 KRT23Q9C075 422 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 KCNH4Q9UQ05 1017 aa18.41■□□□□ 0.54
SLC6A4-205ENST00000579221 SLC27A2O14975 620 aa18.4■□□□□ 0.54
SLC6A4-205ENST00000579221 CETPP11597 493 aa18.4■□□□□ 0.54
SLC6A4-205ENST00000579221 PPP4R3BQ5MIZ7 849 aa18.4■□□□□ 0.54
SLC6A4-205ENST00000579221 CCDC84Q86UT8 332 aaPredicted RBP18.4■□□□□ 0.54
SLC6A4-205ENST00000579221 USP26Q9BXU7 913 aa18.4■□□□□ 0.54
SLC6A4-205ENST00000579221 TRIM75PA6NK02 468 aa18.39■□□□□ 0.53
SLC6A4-205ENST00000579221 C19orf81C9J6K1 198 aa18.39■□□□□ 0.53
SLC6A4-205ENST00000579221 USP17L10C9JJH3 530 aa18.39■□□□□ 0.53
SLC6A4-205ENST00000579221 E7EWF7 191 aa18.39■□□□□ 0.53
SLC6A4-205ENST00000579221 ZKSCAN1P17029 563 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms