RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 JAG1P78504 1218 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 FKBP5Q13451 457 aaPredicted RBP14.01□□□□□ -0.17
GGA3-206ENST00000578773 PICALMQ13492 652 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 MICALL1Q8N3F8 863 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 ZNF280CQ8ND82 737 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 GPRC5AQ8NFJ5 357 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 NPLOC4Q8TAT6 608 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 PAGR1Q9BTK6 254 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 STK31Q9BXU1 1019 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 CXXC1Q9P0U4 656 aaPredicted RBP14.01□□□□□ -0.17
GGA3-206ENST00000578773 ADAMTS8Q9UP79 889 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 SUGT1Q9Y2Z0 365 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 ERVK-9P63128 1117 aa14□□□□□ -0.17
GGA3-206ENST00000578773 ERVK-24P63145 666 aa14□□□□□ -0.17
GGA3-206ENST00000578773 MAP2K5Q13163 448 aa14□□□□□ -0.17
GGA3-206ENST00000578773 CAVIN4Q5BKX8 364 aa14□□□□□ -0.17
GGA3-206ENST00000578773 PLEKHH3Q7Z736 793 aa14□□□□□ -0.17
GGA3-206ENST00000578773 TRMT44Q8IYL2 757 aaKnown RBP14□□□□□ -0.17
GGA3-206ENST00000578773 KLHDC4Q8TBB5 520 aa14□□□□□ -0.17
GGA3-206ENST00000578773 SUCLG2Q96I99 432 aa14□□□□□ -0.17
GGA3-206ENST00000578773 BUD13Q9BRD0 619 aaKnown RBP eCLIP14□□□□□ -0.172e-7■■□□□ 14.2
GGA3-206ENST00000578773 A0A0G2JMZ2 1700 aa14□□□□□ -0.17
GGA3-206ENST00000578773 UTYO14607 1347 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 ENTPD3O75355 529 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 CNMDO75829 334 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 CYBAP13498 195 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 IRX3P78415 501 aaPredicted RBP13.99□□□□□ -0.17
GGA3-206ENST00000578773 MTMR2Q13614 643 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 SH3D19Q5HYK7 790 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 BEND3Q5T5X7 828 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 IDI2Q9BXS1 227 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 BRWD1Q9NSI6 2320 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 ZNF236Q9UL36 1845 aa13.99□□□□□ -0.17
GGA3-206ENST00000578773 MROH5Q6ZUA9 1318 aa13.98□□□□□ -0.17
GGA3-206ENST00000578773 MAPK4P31152 587 aa13.98□□□□□ -0.17
GGA3-206ENST00000578773 FPGSQ05932 587 aa13.98□□□□□ -0.17
GGA3-206ENST00000578773 C16orf59Q7L2K0 433 aa13.98□□□□□ -0.17
GGA3-206ENST00000578773 CD320Q9NPF0 282 aa13.98□□□□□ -0.17
GGA3-206ENST00000578773 GPR37L1O60883 481 aa13.97□□□□□ -0.17
GGA3-206ENST00000578773 IGHA2P01877 340 aa13.97□□□□□ -0.17
GGA3-206ENST00000578773 CLTBP09497 229 aa13.97□□□□□ -0.17
GGA3-206ENST00000578773 FGFR2P21802 821 aa13.97□□□□□ -0.17
GGA3-206ENST00000578773 PABPC4Q13310 644 aaKnown RBP eCLIP13.97□□□□□ -0.17
GGA3-206ENST00000578773 MFSD14CQ5VZR4 134 aa13.97□□□□□ -0.17
GGA3-206ENST00000578773 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
GGA3-206ENST00000578773 EDC3Q96F86 508 aaKnown RBP13.97□□□□□ -0.17
GGA3-206ENST00000578773 NKX2-4Q9H2Z4 354 aa13.97□□□□□ -0.17
GGA3-206ENST00000578773 COL4A4P53420 1690 aaPredicted RBP13.97□□□□□ -0.17
GGA3-206ENST00000578773 FOCADQ5VW36 1801 aa13.97□□□□□ -0.17
GGA3-206ENST00000578773 KBTBD13C9JR72 458 aa13.96□□□□□ -0.17
GGA3-206ENST00000578773 GRM8O00222 908 aa13.96□□□□□ -0.17
GGA3-206ENST00000578773 APAF1O14727 1248 aa13.96□□□□□ -0.17
GGA3-206ENST00000578773 KIAA0355O15063 1070 aa13.96□□□□□ -0.17
GGA3-206ENST00000578773 PDE8BO95263 885 aa13.96□□□□□ -0.17
GGA3-206ENST00000578773 RAG1P15918 1043 aa13.96□□□□□ -0.17
GGA3-206ENST00000578773 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.96□□□□□ -0.17
GGA3-206ENST00000578773 YBX2Q9Y2T7 364 aaKnown RBP13.96□□□□□ -0.17
GGA3-206ENST00000578773 TRIOO75962 3097 aa13.96□□□□□ -0.18
GGA3-206ENST00000578773 ZNF318Q5VUA4 2279 aa13.95□□□□□ -0.18
GGA3-206ENST00000578773 GAKO14976 1311 aa13.95□□□□□ -0.18
GGA3-206ENST00000578773 PQBP1O60828 265 aaKnown RBP13.95□□□□□ -0.18
GGA3-206ENST00000578773 LDHBP07195 334 aaKnown RBP13.95□□□□□ -0.18
GGA3-206ENST00000578773 HOXA7P31268 230 aaPredicted RBP13.95□□□□□ -0.18
GGA3-206ENST00000578773 NHLH1Q02575 133 aa13.95□□□□□ -0.18
GGA3-206ENST00000578773 LRRC41Q15345 812 aa13.95□□□□□ -0.18
GGA3-206ENST00000578773 TWISTNBQ3B726 338 aaPredicted RBP13.95□□□□□ -0.18
GGA3-206ENST00000578773 FAM47AQ5JRC9 791 aa13.95□□□□□ -0.18
GGA3-206ENST00000578773 PRAMEF19Q5SWL8 479 aa13.95□□□□□ -0.18
GGA3-206ENST00000578773 WDR66Q8TBY9 1149 aa13.95□□□□□ -0.18
GGA3-206ENST00000578773 ANKS1AQ92625 1134 aa13.95□□□□□ -0.18
GGA3-206ENST00000578773 USP17L5A8MUK1 530 aa13.94□□□□□ -0.18
GGA3-206ENST00000578773 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
GGA3-206ENST00000578773 CAP2P40123 477 aa13.94□□□□□ -0.18
GGA3-206ENST00000578773 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
GGA3-206ENST00000578773 TMEM240Q5SV17 173 aa13.94□□□□□ -0.18
GGA3-206ENST00000578773 RASIP1Q5U651 963 aa13.94□□□□□ -0.18
GGA3-206ENST00000578773 WDR78Q5VTH9 848 aa13.94□□□□□ -0.18
GGA3-206ENST00000578773 KRT40Q6A162 431 aa13.94□□□□□ -0.18
GGA3-206ENST00000578773 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
GGA3-206ENST00000578773 PHOX2BQ99453 314 aa13.94□□□□□ -0.18
GGA3-206ENST00000578773 OSBPL5Q9H0X9 879 aaPredicted RBP13.94□□□□□ -0.18
GGA3-206ENST00000578773 MYO5AQ9Y4I1 1855 aaKnown RBP13.93□□□□□ -0.18
GGA3-206ENST00000578773 SMIM22K7EJ46 135 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 RFXAPO00287 272 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 TLL1O43897 1013 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 MSCO60682 206 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 ACRP10323 421 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 PTPREP23469 700 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 ATP2B2Q01814 1243 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 C1orf53Q5VUE5 145 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 CCAR1Q8IX12 1150 aaKnown RBP13.93□□□□□ -0.18
GGA3-206ENST00000578773 ANKRD44Q8N8A2 993 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 BICC1Q9H694 974 aaKnown RBP13.93□□□□□ -0.18
GGA3-206ENST00000578773 TACC3Q9Y6A5 838 aa13.93□□□□□ -0.18
GGA3-206ENST00000578773 COL11A1P12107 1806 aaPredicted RBP13.92□□□□□ -0.18
GGA3-206ENST00000578773 TBC1D12O60347 775 aa13.92□□□□□ -0.18
GGA3-206ENST00000578773 BTDP43251 543 aa13.92□□□□□ -0.18
GGA3-206ENST00000578773 BACE1P56817 501 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms