RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 MMP1P03956 469 aa16.78■□□□□ 0.28
CUEDC1-206ENST00000577830 NTRK3Q16288 839 aa16.78■□□□□ 0.28
CUEDC1-206ENST00000577830 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
CUEDC1-206ENST00000577830 WASF1Q92558 559 aa16.78■□□□□ 0.28
CUEDC1-206ENST00000577830 MRPL44Q9H9J2 332 aaKnown RBP16.78■□□□□ 0.28
CUEDC1-206ENST00000577830 HPSEQ9Y251 543 aa16.78■□□□□ 0.28
CUEDC1-206ENST00000577830 PARP3Q9Y6F1 533 aa16.78■□□□□ 0.28
CUEDC1-206ENST00000577830 GTF2E1P29083 439 aaPredicted RBP16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 CTNND2Q9UQB3 1225 aa16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 MAP3K15Q6ZN16 1313 aa16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 OAS2P29728 719 aaKnown RBP16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 RBL2Q08999 1139 aa16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 DHX8Q14562 1220 aaKnown RBP16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
CUEDC1-206ENST00000577830 TRIM75PA6NK02 468 aa16.77■□□□□ 0.27
CUEDC1-206ENST00000577830 MCM7P33993 719 aa16.77■□□□□ 0.27
CUEDC1-206ENST00000577830 PLA2G4AP47712 749 aa16.77■□□□□ 0.27
CUEDC1-206ENST00000577830 UBE3CQ15386 1083 aa16.77■□□□□ 0.27
CUEDC1-206ENST00000577830 FANCBQ8NB91 859 aa16.77■□□□□ 0.27
CUEDC1-206ENST00000577830 NUP88Q99567 741 aaPredicted RBP16.77■□□□□ 0.27
CUEDC1-206ENST00000577830 N4BP3O15049 544 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 GYG1P46976 350 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 ACRBPQ8NEB7 543 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 TIGD1Q96MW7 591 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 AFDNP55196 1824 aaKnown RBP16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 GSG1L2A8MUP6 293 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 AKR1B15C9JRZ8 316 aaPredicted RBP16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 FMNL1O95466 1100 aaPredicted RBP16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 UQCRFS1P1P0C7P4 283 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 LMAN1P49257 510 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 ST5P78524 1137 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 TC2NQ8N9U0 490 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 PARD6BQ9BYG5 372 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 ARFGAP3Q9NP61 516 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 VGLL3A8MV65 326 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 TADA3O75528 432 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 H2AFXP16104 143 aaPredicted RBP16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 EARS2Q5JPH6 523 aaKnown RBP16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 LPIN2Q92539 896 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 GDAP1L1Q96MZ0 367 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 KRT23Q9C075 422 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 TAB2Q9NYJ8 693 aa16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
CUEDC1-206ENST00000577830 TNKSO95271 1327 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 PLEKHA8P1O95397 391 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 CASP14P31944 242 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 DYNLL1P63167 89 aaKnown RBP16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 RILPL1Q5EBL4 403 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 FAM47AQ5JRC9 791 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 SYMPKQ92797 1274 aaKnown RBP16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 CDC5LQ99459 802 aaKnown RBP16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 EXOC5O00471 708 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 PDE8AO60658 829 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 CCDC175P0C221 793 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 FILIP1LQ4L180 1135 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 FBXO2Q9UK22 296 aaPredicted RBP16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 PHRF1Q9P1Y6 1649 aaKnown RBP16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 KIF5CO60282 957 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 CSF1RP07333 972 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 ERCC3P19447 782 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 KCNQ4P56696 695 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 CCDC93Q567U6 631 aa16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 PCMTD1Q96MG8 357 aaPredicted RBP16.75■□□□□ 0.27
CUEDC1-206ENST00000577830 NMT2O60551 498 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 TPM1P09493 284 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 XBP1P17861 261 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 PHLPP2Q6ZVD8 1323 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 DEXIO95424 95 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 IFNAR1P17181 557 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 CRACR2BQ8N4Y2 399 aaPredicted RBP16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 SUGCTQ9HAC7 445 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 PTPREP23469 700 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 IGHMBP2P38935 993 aaKnown RBP16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 EVX2Q03828 476 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 PIK3AP1Q6ZUJ8 805 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 TFR2Q9UP52 801 aa16.74■□□□□ 0.27
CUEDC1-206ENST00000577830 MRC1P22897 1456 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 SYNRGQ9UMZ2 1314 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 A0A087X0B3 334 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 WNT7AO00755 349 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 SASH3O75995 380 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 CCDC102AQ96A19 550 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 SLF1Q9BQI6 1058 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 CNNM2Q9H8M5 875 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 EFCAB8A8MWE9 144 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 ABL1P00519 1130 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 NLRP5P59047 1200 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 GUCA1BQ9UMX6 200 aa16.73■□□□□ 0.27
CUEDC1-206ENST00000577830 CCDC196A0A1B0GTZ2 297 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms