RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ZFYVE28Q9HCC9 887 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 EPB41L4AQ9HCS5 686 aaPredicted RBP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 AATFQ9NY61 560 aaKnown RBP eCLIP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 EYSQ5T1H1 3165 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 TMEM265A0A087WTH1 108 aa11.97□□□□□ -0.49
CRLF3-202ENST00000577725 UNCXA6NJT0 531 aa11.97□□□□□ -0.49
CRLF3-202ENST00000577725 CCL5P13501 91 aa11.97□□□□□ -0.49
CRLF3-202ENST00000577725 TBC1D22AQ8WUA7 517 aa11.97□□□□□ -0.49
CRLF3-202ENST00000577725 CLMNQ96JQ2 1002 aa11.97□□□□□ -0.49
CRLF3-202ENST00000577725 JAKMIP1Q96N16 626 aaKnown RBP11.97□□□□□ -0.49
CRLF3-202ENST00000577725 RIOK1Q9BRS2 568 aaKnown RBP11.97□□□□□ -0.49
CRLF3-202ENST00000577725 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
CRLF3-202ENST00000577725 RNF208Q9H0X6 261 aa11.97□□□□□ -0.49
CRLF3-202ENST00000577725 SLC4A4Q9Y6R1 1079 aa11.97□□□□□ -0.49
CRLF3-202ENST00000577725 BAZ2AQ9UIF9 1905 aaKnown RBP11.97□□□□□ -0.49
CRLF3-202ENST00000577725 MROH7-TTC4A0A0A0MT08 1334 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 LAMA4Q16363 1823 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 GSG1L2A8MUP6 293 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.49
CRLF3-202ENST00000577725 FGAP02671 866 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 CYP21A2P08686 494 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 ANAPC15P60006 121 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 DACT2Q5SW24 774 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 STOX1Q6ZVD7 989 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 NOL8Q76FK4 1167 aaKnown RBP11.96□□□□□ -0.49
CRLF3-202ENST00000577725 PODNQ7Z5L7 613 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 U2AF1L4Q8WU68 220 aaKnown RBP11.96□□□□□ -0.49
CRLF3-202ENST00000577725 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 SNX27Q96L92 541 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 FZD1Q9UP38 647 aa11.96□□□□□ -0.49
CRLF3-202ENST00000577725 PSME4Q14997 1843 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 USP17L3A6NCW0 530 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 USP17L4A6NCW7 530 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 WNT10BO00744 389 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
CRLF3-202ENST00000577725 BTDP43251 543 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 NEK4P51957 841 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 GSTO1P78417 241 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 LACTBP83111 547 aaPredicted RBP11.95□□□□□ -0.5
CRLF3-202ENST00000577725 TAF1CQ15572 869 aaPredicted RBP11.95□□□□□ -0.5
CRLF3-202ENST00000577725 RNF20Q5VTR2 975 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 USP17L1Q7RTZ2 530 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
CRLF3-202ENST00000577725 HSCBQ8IWL3 235 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 IFNL3Q8IZI9 196 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 MAFAQ8NHW3 353 aaPredicted RBP11.95□□□□□ -0.5
CRLF3-202ENST00000577725 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
CRLF3-202ENST00000577725 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 ARHGAP39Q9C0H5 1083 aa11.95□□□□□ -0.5
CRLF3-202ENST00000577725 TTF2Q9UNY4 1162 aaKnown RBP11.95□□□□□ -0.5
CRLF3-202ENST00000577725 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 CDK5RAP2Q96SN8 1893 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 PATL2C9JE40 543 aaKnown RBP11.94□□□□□ -0.5
CRLF3-202ENST00000577725 PPP1R12BO60237 982 aaPredicted RBP11.94□□□□□ -0.5
CRLF3-202ENST00000577725 LDHCP07864 332 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
CRLF3-202ENST00000577725 CAPN2P17655 700 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 GRK4P32298 578 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 GJA5P36382 358 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 TDO2P48775 406 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 STRIP1Q5VSL9 837 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 KIAA0825Q8IV33 1275 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 STK11IPQ8N1F8 1099 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 OGFOD1Q8N543 542 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 SPRYD3Q8NCJ5 442 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 TCEANC2Q96MN5 208 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 NAPBQ9H115 298 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 DAGLAQ9Y4D2 1042 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 PCDHAC2Q9Y5I4 1007 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 LAMB1P07942 1786 aa11.94□□□□□ -0.5
CRLF3-202ENST00000577725 NAV1Q8NEY1 1877 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 RPAP1Q9BWH6 1393 aaPredicted RBP11.93□□□□□ -0.5
CRLF3-202ENST00000577725 CYP2D7A0A087X1C5 515 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 SMIM22K7EJ46 135 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 WDHD1O75717 1129 aaPredicted RBP11.93□□□□□ -0.5
CRLF3-202ENST00000577725 SGPL1O95470 568 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 CYP2D6P10635 497 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 GNAT2P19087 354 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 UBXN2AP68543 259 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 EVX2Q03828 476 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 CTDSPL2Q05D32 466 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 BECN1Q14457 450 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 ALX1Q15699 326 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 TBC1D10CQ8IV04 446 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 FAM161BQ96MY7 647 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 LARP6Q9BRS8 491 aaKnown RBP11.93□□□□□ -0.5
CRLF3-202ENST00000577725 NOL10Q9BSC4 688 aaKnown RBP11.93□□□□□ -0.5
CRLF3-202ENST00000577725 CRNKL1Q9BZJ0 848 aaKnown RBP11.93□□□□□ -0.5
CRLF3-202ENST00000577725 CTNNA3Q9UI47 895 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 TACC3Q9Y6A5 838 aa11.93□□□□□ -0.5
CRLF3-202ENST00000577725 GAKO14976 1311 aa11.92□□□□□ -0.5
CRLF3-202ENST00000577725 E7EWF7 191 aa11.92□□□□□ -0.5
CRLF3-202ENST00000577725 MAGEA10P43363 369 aaPredicted RBP11.92□□□□□ -0.5
CRLF3-202ENST00000577725 IMMTQ16891 758 aaKnown RBP11.92□□□□□ -0.5
CRLF3-202ENST00000577725 TJAP1Q5JTD0 557 aa11.92□□□□□ -0.5
CRLF3-202ENST00000577725 TEX11Q8IYF3 940 aa11.92□□□□□ -0.5
CRLF3-202ENST00000577725 C7orf61Q8IZ16 206 aa11.92□□□□□ -0.5
CRLF3-202ENST00000577725 RAET1EQ8TD07 263 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms