RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 LCORLQ8N3X6 602 aa16.65■□□□□ 0.26
NDE1-211ENST00000576502 DNAJC18Q9H819 358 aa16.65■□□□□ 0.26
NDE1-211ENST00000576502 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
NDE1-211ENST00000576502 ZBTB21Q9ULJ3 1066 aa16.65■□□□□ 0.26
NDE1-211ENST00000576502 PTPN22Q9Y2R2 807 aa16.65■□□□□ 0.26
NDE1-211ENST00000576502 GDF11O95390 407 aa16.64■□□□□ 0.25
NDE1-211ENST00000576502 MX1P20591 662 aa16.64■□□□□ 0.25
NDE1-211ENST00000576502 OSBPP22059 807 aa16.64■□□□□ 0.25
NDE1-211ENST00000576502 BACE1P56817 501 aa16.64■□□□□ 0.25
NDE1-211ENST00000576502 ANKRD45Q5TZF3 282 aa16.64■□□□□ 0.25
NDE1-211ENST00000576502 TATDN1Q6P1N9 297 aa16.64■□□□□ 0.25
NDE1-211ENST00000576502 DCP1AQ9NPI6 582 aaPredicted RBP16.64■□□□□ 0.25
NDE1-211ENST00000576502 SWAP70Q9UH65 585 aa16.64■□□□□ 0.25
NDE1-211ENST00000576502 CPA4Q9UI42 421 aa16.64■□□□□ 0.25
NDE1-211ENST00000576502 MYH8P13535 1937 aa16.63■□□□□ 0.25
NDE1-211ENST00000576502 DDX60LQ5H9U9 1706 aaKnown RBP16.63■□□□□ 0.25
NDE1-211ENST00000576502 USP17L10C9JJH3 530 aa16.63■□□□□ 0.25
NDE1-211ENST00000576502 HMGCS2P54868 508 aa16.63■□□□□ 0.25
NDE1-211ENST00000576502 ABCB5Q2M3G0 1257 aa16.63■□□□□ 0.25
NDE1-211ENST00000576502 SH3D19Q5HYK7 790 aa16.63■□□□□ 0.25
NDE1-211ENST00000576502 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
NDE1-211ENST00000576502 CCDC84Q86UT8 332 aaPredicted RBP16.63■□□□□ 0.25
NDE1-211ENST00000576502 SDR42E1Q8WUS8 393 aa16.63■□□□□ 0.25
NDE1-211ENST00000576502 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.63■□□□□ 0.25
NDE1-211ENST00000576502 LOC285556D6RIA3 1793 aa16.63■□□□□ 0.25
NDE1-211ENST00000576502 RNF113AO15541 343 aaKnown RBP16.62■□□□□ 0.25
NDE1-211ENST00000576502 GH2P01242 217 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 CYP2C8P10632 490 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 GCLCP48506 637 aaPredicted RBP16.62■□□□□ 0.25
NDE1-211ENST00000576502 USP14P54578 494 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 FCGRTP55899 365 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 MTMR2Q13614 643 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
NDE1-211ENST00000576502 APPBP2Q92624 585 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 FEZ1Q99689 392 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 ADGRA2Q96PE1 1338 aa16.62■□□□□ 0.25
NDE1-211ENST00000576502 FMNL1O95466 1100 aaPredicted RBP16.61■□□□□ 0.25
NDE1-211ENST00000576502 GNAT2P19087 354 aa16.61■□□□□ 0.25
NDE1-211ENST00000576502 PSMC4P43686 418 aa16.61■□□□□ 0.25
NDE1-211ENST00000576502 PLCD1P51178 756 aa16.61■□□□□ 0.25
NDE1-211ENST00000576502 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
NDE1-211ENST00000576502 RAB3GAP1Q15042 981 aa16.61■□□□□ 0.25
NDE1-211ENST00000576502 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
NDE1-211ENST00000576502 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
NDE1-211ENST00000576502 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
NDE1-211ENST00000576502 FSD1Q9BTV5 496 aa16.61■□□□□ 0.25
NDE1-211ENST00000576502 BAZ2AQ9UIF9 1905 aaKnown RBP16.6■□□□□ 0.25
NDE1-211ENST00000576502 BCRP11274 1271 aa16.6■□□□□ 0.25
NDE1-211ENST00000576502 MLLT1Q03111 559 aaPredicted RBP16.6■□□□□ 0.25
NDE1-211ENST00000576502 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
NDE1-211ENST00000576502 GIMAP6Q6P9H5 292 aa16.6■□□□□ 0.25
NDE1-211ENST00000576502 ARPP21Q9UBL0 812 aaPredicted RBP16.6■□□□□ 0.25
NDE1-211ENST00000576502 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
NDE1-211ENST00000576502 SHMT1P34896 483 aa16.59■□□□□ 0.25
NDE1-211ENST00000576502 RGS19P49795 217 aa16.59■□□□□ 0.25
NDE1-211ENST00000576502 GABPAQ06546 454 aa16.59■□□□□ 0.25
NDE1-211ENST00000576502 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
NDE1-211ENST00000576502 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
NDE1-211ENST00000576502 PI4K2BQ8TCG2 481 aa16.59■□□□□ 0.25
NDE1-211ENST00000576502 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
NDE1-211ENST00000576502 PUS7LQ9H0K6 701 aaKnown RBP16.59■□□□□ 0.25
NDE1-211ENST00000576502 PRKAB2O43741 272 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
NDE1-211ENST00000576502 SOX10P56693 466 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 C12orf60Q5U649 245 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 TICAM2Q86XR7 235 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 RAET1EQ8TD07 263 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 ARMC5Q96C12 935 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 NACAP1Q9BZK3 213 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 SH2D4AQ9H788 454 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 ZNF287Q9HBT7 754 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 SRRDQ9UH36 339 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.24
NDE1-211ENST00000576502 MGAMO43451 1857 aa16.58■□□□□ 0.24
NDE1-211ENST00000576502 MYPNQ86TC9 1320 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 USP17L12C9JPN9 530 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 USP17L21D6R901 530 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 EXOC6Q8TAG9 804 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 COA7Q96BR5 231 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 STRBPQ96SI9 672 aaKnown RBP16.57■□□□□ 0.24
NDE1-211ENST00000576502 TMEM106CQ9BVX2 250 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 ARHGAP39Q9C0H5 1083 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
NDE1-211ENST00000576502 STAP2Q9UGK3 403 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 PTCH2Q9Y6C5 1203 aa16.57■□□□□ 0.24
NDE1-211ENST00000576502 TNPO2O14787 897 aaKnown RBP16.56■□□□□ 0.24
NDE1-211ENST00000576502 GPAA1O43292 621 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 APPP05067 770 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 PDE1AP54750 535 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 SLFNL1Q499Z3 407 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 ANKRD13CQ8N6S4 541 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 OTUD7AQ8TE49 926 aaPredicted RBP16.56■□□□□ 0.24
NDE1-211ENST00000576502 TRIM47Q96LD4 638 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 KIAA1683Q9H0B3 1180 aa16.56■□□□□ 0.24
NDE1-211ENST00000576502 ARHGEF10LQ9HCE6 1279 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms