RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ZNF589Q86UQ0 364 aaPredicted RBP18.94■□□□□ 0.62
CHD3-215ENST00000572750 CCDC84Q86UT8 332 aaPredicted RBP18.94■□□□□ 0.62
CHD3-215ENST00000572750 ERO1BQ86YB8 467 aa18.94■□□□□ 0.62
CHD3-215ENST00000572750 FOXP4Q8IVH2 680 aaPredicted RBP18.94■□□□□ 0.62
CHD3-215ENST00000572750 PICK1Q9NRD5 415 aa18.94■□□□□ 0.62
CHD3-215ENST00000572750 CUL9Q8IWT3 2517 aa18.94■□□□□ 0.62
CHD3-215ENST00000572750 POTEFA5A3E0 1075 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 USP17L12C9JPN9 530 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 USP17L21D6R901 530 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 IRF6O14896 467 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 FOXP2O15409 715 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 APPP05067 770 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 GNAT2P19087 354 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 TDO2P48775 406 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 PPIL2Q13356 520 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 ERICH6BQ5W0A0 696 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 SLC44A5Q8NCS7 719 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 HELLSQ9NRZ9 838 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 DIAPH3Q9NSV4 1193 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 PPP4R2Q9NY27 417 aa18.93■□□□□ 0.62
CHD3-215ENST00000572750 ARPP21Q9UBL0 812 aaPredicted RBP18.93■□□□□ 0.62
CHD3-215ENST00000572750 PTPRAP18433 802 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 SHMT1P34896 483 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 CAP2P40123 477 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 JAG1P78504 1218 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 GABPAQ06546 454 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 SREBF2Q12772 1141 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 VPS53Q5VIR6 699 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 CTR9Q6PD62 1173 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 TICAM2Q86XR7 235 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 AMOTL1Q8IY63 956 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 DYNLL2Q96FJ2 89 aa18.92■□□□□ 0.62
CHD3-215ENST00000572750 TRIOBPQ9H2D6 2365 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 LAMA4Q16363 1823 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 MANSC4A6NHS7 340 aaPredicted RBP18.91■□□□□ 0.62
CHD3-215ENST00000572750 PPATQ06203 517 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 MCMDC2Q4G0Z9 681 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 C12orf60Q5U649 245 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 GIMAP6Q6P9H5 292 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 FBXO46Q6PJ61 603 aaPredicted RBP18.91■□□□□ 0.62
CHD3-215ENST00000572750 CWC27Q6UX04 472 aaKnown RBP18.91■□□□□ 0.62
CHD3-215ENST00000572750 CCDC171Q6TFL3 1326 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 CEP290O15078 2479 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 LOC285556D6RIA3 1793 aa18.91■□□□□ 0.62
CHD3-215ENST00000572750 PATL2C9JE40 543 aaKnown RBP18.9■□□□□ 0.62
CHD3-215ENST00000572750 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
CHD3-215ENST00000572750 IFNL3Q8IZI9 196 aa18.9■□□□□ 0.62
CHD3-215ENST00000572750 MS4A4AQ96JQ5 239 aa18.9■□□□□ 0.62
CHD3-215ENST00000572750 R3HDMLQ9H3Y0 253 aa18.9■□□□□ 0.62
CHD3-215ENST00000572750 ZBTB21Q9ULJ3 1066 aa18.9■□□□□ 0.62
CHD3-215ENST00000572750 ZHX2Q9Y6X8 837 aa18.9■□□□□ 0.62
CHD3-215ENST00000572750 ROBO3Q96MS0 1386 aa18.9■□□□□ 0.62
CHD3-215ENST00000572750 CCL15-CCL14A0A0B4J2E2 113 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 MINDY4BA8MYZ0 360 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 HIP1O00291 1037 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 IGF2BP3O00425 579 aaKnown RBP eCLIP18.89■□□□□ 0.61
CHD3-215ENST00000572750 GTF2A2P52657 109 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 CCL15Q16663 113 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 STK11IPQ8N1F8 1099 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 BRI3BPQ8WY22 251 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 NACAP1Q9BZK3 213 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 NAPBQ9H115 298 aa18.89■□□□□ 0.61
CHD3-215ENST00000572750 TRIM75PA6NK02 468 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 GH2P01242 217 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 ASNSP08243 561 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 TM4SF4P48230 202 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 SNAPC2Q13487 334 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 CERKLQ49MI3 558 aaPredicted RBP18.88■□□□□ 0.61
CHD3-215ENST00000572750 SBK1Q52WX2 424 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 REM2Q8IYK8 340 aaPredicted RBP18.88■□□□□ 0.61
CHD3-215ENST00000572750 IL25Q9H293 177 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 SWAP70Q9UH65 585 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 KCNH4Q9UQ05 1017 aa18.88■□□□□ 0.61
CHD3-215ENST00000572750 COLQQ9Y215 455 aaPredicted RBP18.88■□□□□ 0.61
CHD3-215ENST00000572750 GPR25O00155 361 aa18.87■□□□□ 0.61
CHD3-215ENST00000572750 C16orf86Q6ZW13 317 aa18.87■□□□□ 0.61
CHD3-215ENST00000572750 IFNL1Q8IU54 200 aa18.87■□□□□ 0.61
CHD3-215ENST00000572750 PTPN18Q99952 460 aa18.87■□□□□ 0.61
CHD3-215ENST00000572750 GREB1LQ9C091 1923 aaPredicted RBP18.87■□□□□ 0.61
CHD3-215ENST00000572750 AFG3L2Q9Y4W6 797 aa18.87■□□□□ 0.61
CHD3-215ENST00000572750 TESPA1A2RU30 521 aaPredicted RBP18.86■□□□□ 0.61
CHD3-215ENST00000572750 DLL1O00548 723 aa18.86■□□□□ 0.61
CHD3-215ENST00000572750 CETPP11597 493 aa18.86■□□□□ 0.61
CHD3-215ENST00000572750 CDK8P49336 464 aa18.86■□□□□ 0.61
CHD3-215ENST00000572750 ABCB5Q2M3G0 1257 aa18.86■□□□□ 0.61
CHD3-215ENST00000572750 USP17L5A8MUK1 530 aa18.85■□□□□ 0.61
CHD3-215ENST00000572750 MPHOSPH10O00566 681 aaKnown RBP18.85■□□□□ 0.61
CHD3-215ENST00000572750 HSPD1P10809 573 aaKnown RBP18.85■□□□□ 0.61
CHD3-215ENST00000572750 CHMLP26374 656 aa18.85■□□□□ 0.61
CHD3-215ENST00000572750 MFAP1P55081 439 aaKnown RBP18.85■□□□□ 0.61
CHD3-215ENST00000572750 PPARAQ07869 468 aa18.85■□□□□ 0.61
CHD3-215ENST00000572750 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
CHD3-215ENST00000572750 FAM43AQ8N2R8 423 aa18.85■□□□□ 0.61
CHD3-215ENST00000572750 ZNF280CQ8ND82 737 aa18.85■□□□□ 0.61
CHD3-215ENST00000572750 LAMA3Q16787 3333 aa18.84■□□□□ 0.61
CHD3-215ENST00000572750 RBBP6Q7Z6E9 1792 aaKnown RBP18.84■□□□□ 0.61
CHD3-215ENST00000572750 A0A0G2JLL6 359 aaPredicted RBP18.84■□□□□ 0.61
CHD3-215ENST00000572750 AKR1B1P15121 316 aa18.84■□□□□ 0.61
CHD3-215ENST00000572750 INHBEP58166 350 aa18.84■□□□□ 0.61
CHD3-215ENST00000572750 SPP2Q13103 211 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms