RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 GPKOWQ92917 476 aaPredicted RBP eCLIP7.95□□□□□ -1.14
PRPF8-204ENST00000572445 CLMNQ96JQ2 1002 aa7.95□□□□□ -1.14
PRPF8-204ENST00000572445 NUDT12Q9BQG2 462 aa7.95□□□□□ -1.14
PRPF8-204ENST00000572445 R3HDMLQ9H3Y0 253 aa7.95□□□□□ -1.14
PRPF8-204ENST00000572445 IQSEC3Q9UPP2 1182 aaPredicted RBP7.95□□□□□ -1.14
PRPF8-204ENST00000572445 HPS5Q9UPZ3 1129 aa7.95□□□□□ -1.14
PRPF8-204ENST00000572445 PCDHGA11Q9Y5H2 935 aa7.95□□□□□ -1.14
PRPF8-204ENST00000572445 ZNF804BA4D1E1 1349 aa7.95□□□□□ -1.14
PRPF8-204ENST00000572445 AOX1Q06278 1338 aa7.95□□□□□ -1.14
PRPF8-204ENST00000572445 KIAA0100Q14667 2235 aaKnown RBP7.95□□□□□ -1.14
PRPF8-204ENST00000572445 SSC5DA1L4H1 1573 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 MYCP01106 439 aaPredicted RBP7.94□□□□□ -1.14
PRPF8-204ENST00000572445 PTPN12Q05209 780 aaKnown RBP7.94□□□□□ -1.14
PRPF8-204ENST00000572445 GCKRQ14397 625 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 NAALADL2Q58DX5 795 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 TTLL5Q6EMB2 1281 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 FAM160A2Q8N612 972 aaPredicted RBP7.94□□□□□ -1.14
PRPF8-204ENST00000572445 DNAAF4Q8WXU2 420 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 ZNF592Q92610 1267 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 LRCH3Q96II8 777 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 GMLQ99445 158 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 NBPF3Q9H094 633 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 BSDC1Q9NW68 430 aaPredicted RBP7.94□□□□□ -1.14
PRPF8-204ENST00000572445 SAGE1Q9NXZ1 904 aa7.94□□□□□ -1.14
PRPF8-204ENST00000572445 ANKRD18BA2A2Z9 1011 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 EXOSC9Q06265 439 aaKnown RBP7.93□□□□□ -1.14
PRPF8-204ENST00000572445 CHAF1AQ13111 956 aaPredicted RBP7.93□□□□□ -1.14
PRPF8-204ENST00000572445 DLGAP5Q15398 846 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 VARS2Q5ST30 1063 aaKnown RBP7.93□□□□□ -1.14
PRPF8-204ENST00000572445 ARMC9Q7Z3E5 817 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 PODNQ7Z5L7 613 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 CERS5Q8N5B7 392 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 ARMC2Q8NEN0 867 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 COA1Q9GZY4 146 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 MYH16Q9H6N6 1097 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 CNNM1Q9NRU3 951 aa7.93□□□□□ -1.14
PRPF8-204ENST00000572445 P4HBP07237 508 aaKnown RBP7.92□□□□□ -1.14
PRPF8-204ENST00000572445 WEE1P30291 646 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 IFIT5Q13325 482 aaKnown RBP7.92□□□□□ -1.14
PRPF8-204ENST00000572445 CFAP100Q494V2 611 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 EPHA10Q5JZY3 1008 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 LDLRAD1Q5T700 205 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 STRIP1Q5VSL9 837 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 APOBEC3FQ8IUX4 373 aaKnown RBP7.92□□□□□ -1.14
PRPF8-204ENST00000572445 CDAN1Q8IWY9 1227 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 FAM9BQ8IZU0 186 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 TSEN2Q8NCE0 465 aaKnown RBP7.92□□□□□ -1.14
PRPF8-204ENST00000572445 BACH2Q9BYV9 841 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 SCUBE2Q9NQ36 999 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
PRPF8-204ENST00000572445 MYO3BQ8WXR4 1341 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 PITPNM2Q9BZ72 1349 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 ZNF609O15014 1411 aa7.92□□□□□ -1.14
PRPF8-204ENST00000572445 TCP10L2B9ZVM9 353 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 GPR25O00155 361 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 GYG1P46976 350 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 CACNB3P54284 484 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 MRPL58Q14197 206 aaKnown RBP7.91□□□□□ -1.14
PRPF8-204ENST00000572445 MSS51Q4VC12 460 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 LMBR1LQ6UX01 489 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 ZNF804AQ7Z570 1209 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 ZBTB33Q86T24 672 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 RGL4Q8IZJ4 473 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 CD99L2Q8TCZ2 262 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 ANKRD2Q9GZV1 360 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 ELP3Q9H9T3 547 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 CD209Q9NNX6 404 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 LEMD3Q9Y2U8 911 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 TRIM17Q9Y577 477 aa7.91□□□□□ -1.14
PRPF8-204ENST00000572445 H7C1W4 665 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 SMARCA5O60264 1052 aaPredicted RBP7.9□□□□□ -1.14
PRPF8-204ENST00000572445 FKTNO75072 461 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 MMP16P51512 607 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 CASP7P55210 303 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 FKBP1BP68106 108 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
PRPF8-204ENST00000572445 SREBF2Q12772 1141 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 CCDC57Q2TAC2 916 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.14
PRPF8-204ENST00000572445 PTCRAQ6ISU1 281 aaPredicted RBP7.9□□□□□ -1.14
PRPF8-204ENST00000572445 ZSCAN29Q8IWY8 852 aaPredicted RBP7.9□□□□□ -1.14
PRPF8-204ENST00000572445 LINS1Q8NG48 757 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 SLC10A4Q96EP9 437 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 WNK4Q96J92 1243 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 HINFPQ9BQA5 517 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 PRR14Q9BWN1 585 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 PUS3Q9BZE2 481 aaKnown RBP7.9□□□□□ -1.14
PRPF8-204ENST00000572445 DEFB129Q9H1M3 183 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 C9orf78Q9NZ63 289 aaPredicted RBP7.9□□□□□ -1.14
PRPF8-204ENST00000572445 PCDHB3Q9Y5E6 796 aa7.9□□□□□ -1.14
PRPF8-204ENST00000572445 MAGEB6P1A0A0J9YX57 407 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 IGF2BP3O00425 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
PRPF8-204ENST00000572445 MYO1BO43795 1136 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 NR1I2O75469 434 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 FRAT2O75474 233 aaPredicted RBP7.89□□□□□ -1.15
PRPF8-204ENST00000572445 FOXO4P98177 505 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 NAA30Q147X3 362 aaPredicted RBP7.89□□□□□ -1.15
PRPF8-204ENST00000572445 MFSD14BQ5SR56 506 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 SPRYD7Q5W111 196 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 LDHAL6AQ6ZMR3 332 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms