RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 PRKCZQ05513 592 aa16.68■□□□□ 0.26
RAB40B-204ENST00000571554 NBPF11Q86T75 865 aa16.68■□□□□ 0.26
RAB40B-204ENST00000571554 PROCA1Q8NCQ7 364 aaPredicted RBP16.68■□□□□ 0.26
RAB40B-204ENST00000571554 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
RAB40B-204ENST00000571554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAB40B-204ENST00000571554 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
RAB40B-204ENST00000571554 GABRQQ9UN88 632 aa16.68■□□□□ 0.26
RAB40B-204ENST00000571554 TCRBV5S4A2TA0A5A2 114 aa16.67■□□□□ 0.26
RAB40B-204ENST00000571554 GNRH1P01148 92 aa16.67■□□□□ 0.26
RAB40B-204ENST00000571554 GH2P01242 217 aa16.67■□□□□ 0.26
RAB40B-204ENST00000571554 PLCD1P51178 756 aa16.67■□□□□ 0.26
RAB40B-204ENST00000571554 LCORLQ8N3X6 602 aa16.67■□□□□ 0.26
RAB40B-204ENST00000571554 SDR42E1Q8WUS8 393 aa16.67■□□□□ 0.26
RAB40B-204ENST00000571554 TMEM106CQ9BVX2 250 aa16.67■□□□□ 0.26
RAB40B-204ENST00000571554 ARMT1Q9H993 441 aa16.67■□□□□ 0.26
RAB40B-204ENST00000571554 PEX10O60683 326 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
RAB40B-204ENST00000571554 ATP5JP18859 108 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 HOXD10P28358 340 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 MTFR1Q15390 333 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 ZYXQ15942 572 aaKnown RBP16.66■□□□□ 0.26
RAB40B-204ENST00000571554 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 CERS3Q8IU89 383 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 WDR18Q9BV38 432 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 TBC1D2Q9BYX2 928 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 CRNKL1Q9BZJ0 848 aaKnown RBP16.66■□□□□ 0.26
RAB40B-204ENST00000571554 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
RAB40B-204ENST00000571554 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 PNMA3Q9UL41 463 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 MYH7P12883 1935 aa16.66■□□□□ 0.26
RAB40B-204ENST00000571554 MKI67P46013 3256 aaKnown RBP16.65■□□□□ 0.26
RAB40B-204ENST00000571554 TNPO2O14787 897 aaKnown RBP16.65■□□□□ 0.26
RAB40B-204ENST00000571554 CYP2D6P10635 497 aa16.65■□□□□ 0.26
RAB40B-204ENST00000571554 PRMT2P55345 433 aa16.65■□□□□ 0.26
RAB40B-204ENST00000571554 BACE1P56817 501 aa16.65■□□□□ 0.26
RAB40B-204ENST00000571554 SH3D19Q5HYK7 790 aa16.65■□□□□ 0.26
RAB40B-204ENST00000571554 HAUS7Q99871 368 aa16.65■□□□□ 0.26
RAB40B-204ENST00000571554 MCM9Q9NXL9 1143 aa16.65■□□□□ 0.26
RAB40B-204ENST00000571554 TMOD4Q9NZQ9 345 aa16.65■□□□□ 0.26
RAB40B-204ENST00000571554 TAOK2Q9UL54 1235 aa16.65■□□□□ 0.26
RAB40B-204ENST00000571554 PRKAB2O43741 272 aa16.64■□□□□ 0.25
RAB40B-204ENST00000571554 MBD4O95243 580 aa16.64■□□□□ 0.25
RAB40B-204ENST00000571554 GRK4P32298 578 aa16.64■□□□□ 0.25
RAB40B-204ENST00000571554 SHMT1P34896 483 aa16.64■□□□□ 0.25
RAB40B-204ENST00000571554 ADD2P35612 726 aa16.64■□□□□ 0.25
RAB40B-204ENST00000571554 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
RAB40B-204ENST00000571554 TTC6Q86TZ1 520 aa16.64■□□□□ 0.25
RAB40B-204ENST00000571554 BIN2Q9UBW5 565 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-204ENST00000571554 BAZ2AQ9UIF9 1905 aaKnown RBP16.64■□□□□ 0.25
RAB40B-204ENST00000571554 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
RAB40B-204ENST00000571554 USP17L10C9JJH3 530 aa16.63■□□□□ 0.25
RAB40B-204ENST00000571554 ELNP15502 786 aa16.63■□□□□ 0.25
RAB40B-204ENST00000571554 FLT3LGP49771 235 aa16.63■□□□□ 0.25
RAB40B-204ENST00000571554 RRP1P56182 461 aaKnown RBP16.63■□□□□ 0.25
RAB40B-204ENST00000571554 IRX3P78415 501 aaPredicted RBP16.63■□□□□ 0.25
RAB40B-204ENST00000571554 PABPC4Q13310 644 aaKnown RBP eCLIP16.63■□□□□ 0.25
RAB40B-204ENST00000571554 CERKLQ49MI3 558 aaPredicted RBP16.63■□□□□ 0.25
RAB40B-204ENST00000571554 TATDN1Q6P1N9 297 aa16.63■□□□□ 0.25
RAB40B-204ENST00000571554 TMED8Q6PL24 325 aaPredicted RBP16.63■□□□□ 0.25
RAB40B-204ENST00000571554 EHD4Q9H223 541 aa16.63■□□□□ 0.25
RAB40B-204ENST00000571554 PCDHB15Q9Y5E8 787 aa16.63■□□□□ 0.25
RAB40B-204ENST00000571554 SMIM22K7EJ46 135 aa16.62■□□□□ 0.25
RAB40B-204ENST00000571554 FAM110CQ1W6H9 321 aa16.62■□□□□ 0.25
RAB40B-204ENST00000571554 ABCB5Q2M3G0 1257 aa16.62■□□□□ 0.25
RAB40B-204ENST00000571554 SLC44A5Q8NCS7 719 aa16.62■□□□□ 0.25
RAB40B-204ENST00000571554 P2RX7Q99572 595 aaKnown RBP16.62■□□□□ 0.25
RAB40B-204ENST00000571554 FEZ1Q99689 392 aa16.62■□□□□ 0.25
RAB40B-204ENST00000571554 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.25
RAB40B-204ENST00000571554 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
RAB40B-204ENST00000571554 DCP1AQ9NPI6 582 aaPredicted RBP16.62■□□□□ 0.25
RAB40B-204ENST00000571554 EMILIN3Q9NT22 766 aa16.62■□□□□ 0.25
RAB40B-204ENST00000571554 CYP2D7A0A087X1C5 515 aa16.61■□□□□ 0.25
RAB40B-204ENST00000571554 C19orf81C9J6K1 198 aa16.61■□□□□ 0.25
RAB40B-204ENST00000571554 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
RAB40B-204ENST00000571554 GCLCP48506 637 aaPredicted RBP16.61■□□□□ 0.25
RAB40B-204ENST00000571554 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
RAB40B-204ENST00000571554 DYNLL2Q96FJ2 89 aa16.61■□□□□ 0.25
RAB40B-204ENST00000571554 ECHDC1Q9NTX5 307 aa16.61■□□□□ 0.25
RAB40B-204ENST00000571554 GINM1Q9NU53 330 aa16.61■□□□□ 0.25
RAB40B-204ENST00000571554 MYH8P13535 1937 aa16.6■□□□□ 0.25
RAB40B-204ENST00000571554 ADCY3O60266 1144 aa16.6■□□□□ 0.25
RAB40B-204ENST00000571554 CCL5P13501 91 aa16.6■□□□□ 0.25
RAB40B-204ENST00000571554 SEPT2Q15019 361 aa16.6■□□□□ 0.25
RAB40B-204ENST00000571554 USP17L2Q6R6M4 530 aa16.6■□□□□ 0.25
RAB40B-204ENST00000571554 COA7Q96BR5 231 aa16.6■□□□□ 0.25
RAB40B-204ENST00000571554 CRBNQ96SW2 442 aa16.6■□□□□ 0.25
RAB40B-204ENST00000571554 CABP5Q9NP86 173 aa16.6■□□□□ 0.25
RAB40B-204ENST00000571554 GUCY1A2P33402 732 aa16.59■□□□□ 0.25
RAB40B-204ENST00000571554 HERVK_113P62684 666 aa16.59■□□□□ 0.25
RAB40B-204ENST00000571554 GABPAQ06546 454 aa16.59■□□□□ 0.25
RAB40B-204ENST00000571554 PRPF38BQ5VTL8 546 aaKnown RBP16.59■□□□□ 0.25
RAB40B-204ENST00000571554 SLAIN1Q8ND83 568 aa16.59■□□□□ 0.25
RAB40B-204ENST00000571554 PAGR1Q9BTK6 254 aa16.59■□□□□ 0.25
RAB40B-204ENST00000571554 PUS7LQ9H0K6 701 aaKnown RBP16.59■□□□□ 0.25
RAB40B-204ENST00000571554 TXNRD2Q9NNW7 524 aa16.59■□□□□ 0.25
RAB40B-204ENST00000571554 INHAP05111 366 aa16.58■□□□□ 0.24
RAB40B-204ENST00000571554 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
RAB40B-204ENST00000571554 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
RAB40B-204ENST00000571554 CLEC10AQ8IUN9 316 aa16.58■□□□□ 0.24
RAB40B-204ENST00000571554 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms