RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 PCDHGC5Q9Y5F6 944 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 CEP162Q5TB80 1403 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 ID3Q02535 119 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 PPP2R3AQ06190 1150 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 CDK5R2Q13319 367 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 DUSP27Q5VZP5 1158 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 SULF2Q8IWU5 870 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 ABI1Q8IZP0 508 aa7.47□□□□□ -1.21
KARSP3-201ENST00000571212 ZC3H7BQ9UGR2 993 aaKnown RBP7.47□□□□□ -1.21
KARSP3-201ENST00000571212 DNMT1P26358 1616 aaKnown RBP7.46□□□□□ -1.22
KARSP3-201ENST00000571212 A2ML1A8K2U0 1454 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 RTEL1-TNFRSF6BF6WH68 1400 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 MTUS2Q5JR59 1369 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 SYNGAP1Q96PV0 1343 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 FBXO24O75426 580 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 SLFN14P0C7P3 912 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 HCLS1P14317 486 aaPredicted RBP7.46□□□□□ -1.22
KARSP3-201ENST00000571212 TTLL4Q14679 1199 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 CPSF6Q16630 551 aaKnown RBP eCLIP7.46□□□□□ -1.22
KARSP3-201ENST00000571212 KIF4BQ2VIQ3 1234 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 OSBPL7Q9BZF2 842 aa7.46□□□□□ -1.22
KARSP3-201ENST00000571212 POLR1AO95602 1720 aaPredicted RBP7.45□□□□□ -1.22
KARSP3-201ENST00000571212 TIAM1Q13009 1591 aa7.45□□□□□ -1.22
KARSP3-201ENST00000571212 MBD5Q9P267 1494 aa7.45□□□□□ -1.22
KARSP3-201ENST00000571212 XRCC5P13010 732 aaKnown RBP7.45□□□□□ -1.22
KARSP3-201ENST00000571212 MAP1SQ66K74 1059 aaPredicted RBP7.45□□□□□ -1.22
KARSP3-201ENST00000571212 OGFOD3Q6PK18 319 aa7.45□□□□□ -1.22
KARSP3-201ENST00000571212 PIDD1Q9HB75 910 aa7.45□□□□□ -1.22
KARSP3-201ENST00000571212 KRT82Q9NSB4 513 aa7.45□□□□□ -1.22
KARSP3-201ENST00000571212 ADGRE2Q9UHX3 823 aa7.45□□□□□ -1.22
KARSP3-201ENST00000571212 ANGEL1Q9UNK9 670 aaKnown RBP7.45□□□□□ -1.22
KARSP3-201ENST00000571212 EHBP1L1Q8N3D4 1523 aa7.44□□□□□ -1.22
KARSP3-201ENST00000571212 FAM135AQ9P2D6 1515 aa7.44□□□□□ -1.22
KARSP3-201ENST00000571212 DHX29Q7Z478 1369 aaKnown RBP7.44□□□□□ -1.22
KARSP3-201ENST00000571212 RNGTTO60942 597 aaKnown RBP7.44□□□□□ -1.22
KARSP3-201ENST00000571212 ARNTP27540 789 aa7.44□□□□□ -1.22
KARSP3-201ENST00000571212 TPTE2Q6XPS3 522 aa7.44□□□□□ -1.22
KARSP3-201ENST00000571212 GRIN3AQ8TCU5 1115 aa7.44□□□□□ -1.22
KARSP3-201ENST00000571212 CBX8Q9HC52 389 aa7.44□□□□□ -1.22
KARSP3-201ENST00000571212 ZNF644Q9H582 1327 aaPredicted RBP7.43□□□□□ -1.22
KARSP3-201ENST00000571212 PAGE1O75459 146 aa7.43□□□□□ -1.22
KARSP3-201ENST00000571212 PRNPP04156 253 aa7.43□□□□□ -1.22
KARSP3-201ENST00000571212 FMR1Q06787 632 aaKnown RBP eCLIP7.43□□□□□ -1.22
KARSP3-201ENST00000571212 SMYD4Q8IYR2 804 aaPredicted RBP7.43□□□□□ -1.22
KARSP3-201ENST00000571212 GPBAR1Q8TDU6 330 aa7.43□□□□□ -1.22
KARSP3-201ENST00000571212 KRTAP4-12Q9BQ66 201 aa7.43□□□□□ -1.22
KARSP3-201ENST00000571212 ATXN3LQ9H3M9 355 aa7.43□□□□□ -1.22
KARSP3-201ENST00000571212 BSDC1Q9NW68 430 aaPredicted RBP7.43□□□□□ -1.22
KARSP3-201ENST00000571212 CPS1P31327 1500 aa7.43□□□□□ -1.22
KARSP3-201ENST00000571212 TNRQ92752 1358 aa7.43□□□□□ -1.22
KARSP3-201ENST00000571212 NEURL4Q96JN8 1562 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 ENC1O14682 589 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 NEFMP07197 916 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 FAM87AP0C7U9 286 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 NME2P22392 152 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 CYP27A1Q02318 531 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 COL19A1Q14993 1142 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 ASB16Q96NS5 453 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 NECAB3Q96P71 396 aaPredicted RBP7.42□□□□□ -1.22
KARSP3-201ENST00000571212 CSADQ9Y600 493 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 PZPP20742 1482 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 KDM5DQ9BY66 1539 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 KIF3BO15066 747 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 TOM1O60784 492 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 BMP6P22004 513 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 ZNF252P-AS1Q0IIN9 211 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 RASIP1Q5U651 963 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 ZSCAN29Q8IWY8 852 aaPredicted RBP7.42□□□□□ -1.22
KARSP3-201ENST00000571212 TP53INP2Q8IXH6 220 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 FAM181AQ8N9Y4 354 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 U3KQE9 123 aa7.42□□□□□ -1.22
KARSP3-201ENST00000571212 CCDC141Q6ZP82 1450 aa7.41□□□□□ -1.22
KARSP3-201ENST00000571212 SHANK2Q9UPX8 1470 aa7.41□□□□□ -1.22
KARSP3-201ENST00000571212 LEFTY1O75610 366 aa7.41□□□□□ -1.22
KARSP3-201ENST00000571212 GSTT1P30711 240 aa7.41□□□□□ -1.22
KARSP3-201ENST00000571212 ZC3H12AQ5D1E8 599 aaKnown RBP7.41□□□□□ -1.22
KARSP3-201ENST00000571212 VSIG10LQ86VR7 867 aa7.41□□□□□ -1.22
KARSP3-201ENST00000571212 ISL2Q96A47 359 aa7.41□□□□□ -1.22
KARSP3-201ENST00000571212 VPS8Q8N3P4 1428 aa7.41□□□□□ -1.22
KARSP3-201ENST00000571212 NLRP1Q9C000 1473 aa7.4□□□□□ -1.22
KARSP3-201ENST00000571212 DEPDC5O75140 1603 aa7.4□□□□□ -1.22
KARSP3-201ENST00000571212 KCNA1Q09470 495 aa7.4□□□□□ -1.22
KARSP3-201ENST00000571212 ZNF574Q6ZN55 896 aaPredicted RBP7.4□□□□□ -1.22
KARSP3-201ENST00000571212 ANKLE2Q86XL3 938 aa7.4□□□□□ -1.22
KARSP3-201ENST00000571212 THEMISQ8N1K5 641 aaPredicted RBP7.4□□□□□ -1.22
KARSP3-201ENST00000571212 FLCNQ8NFG4 579 aa7.4□□□□□ -1.22
KARSP3-201ENST00000571212 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.22
KARSP3-201ENST00000571212 MIA2Q96PC5 1412 aa7.4□□□□□ -1.23
KARSP3-201ENST00000571212 MED1Q15648 1581 aaPredicted RBP7.4□□□□□ -1.23
KARSP3-201ENST00000571212 WASHC2CQ9Y4E1 1318 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 MED14O60244 1454 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 CAMSAP2Q08AD1 1489 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 PAX4O43316 350 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 P4HBP07237 508 aaKnown RBP7.39□□□□□ -1.23
KARSP3-201ENST00000571212 HSPA1LP34931 641 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 PPM1JQ5JR12 505 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 PLD6Q8N2A8 252 aaKnown RBP7.39□□□□□ -1.23
KARSP3-201ENST00000571212 VWDEQ8N2E2 1590 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 FBF1Q8TES7 1133 aa7.39□□□□□ -1.23
KARSP3-201ENST00000571212 EMILIN2Q9BXX0 1053 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms