RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CRACR2BQ8N4Y2 399 aaPredicted RBP21.46■■□□□ 1.03
CIITA-206ENST00000571190 MIGA1Q8NAN2 632 aa21.46■■□□□ 1.03
CIITA-206ENST00000571190 HTATIP2Q9BUP3 242 aa21.46■■□□□ 1.03
CIITA-206ENST00000571190 TXNRD2Q9NNW7 524 aa21.46■■□□□ 1.03
CIITA-206ENST00000571190 ZBTB21Q9ULJ3 1066 aa21.46■■□□□ 1.03
CIITA-206ENST00000571190 IDH1O75874 414 aaKnown RBP21.45■■□□□ 1.02
CIITA-206ENST00000571190 PRO3102Q9H379 93 aa21.45■■□□□ 1.02
CIITA-206ENST00000571190 GINM1Q9NU53 330 aa21.45■■□□□ 1.02
CIITA-206ENST00000571190 C19orf81C9J6K1 198 aa21.44■■□□□ 1.02
CIITA-206ENST00000571190 USP17L10C9JJH3 530 aa21.44■■□□□ 1.02
CIITA-206ENST00000571190 TFRCP02786 760 aaKnown RBP21.44■■□□□ 1.02
CIITA-206ENST00000571190 TRIM32Q13049 653 aa21.44■■□□□ 1.02
CIITA-206ENST00000571190 PANK1Q8TE04 598 aa21.44■■□□□ 1.02
CIITA-206ENST00000571190 EMILIN3Q9NT22 766 aa21.44■■□□□ 1.02
CIITA-206ENST00000571190 TMOD4Q9NZQ9 345 aa21.44■■□□□ 1.02
CIITA-206ENST00000571190 RBM27Q9P2N5 1060 aaKnown RBP21.44■■□□□ 1.02
CIITA-206ENST00000571190 EXOC6BQ9Y2D4 811 aa21.44■■□□□ 1.02
CIITA-206ENST00000571190 SIPA1L1O43166 1804 aa21.43■■□□□ 1.02
CIITA-206ENST00000571190 PTPRFP10586 1907 aa21.43■■□□□ 1.02
CIITA-206ENST00000571190 IRX3P78415 501 aaPredicted RBP21.43■■□□□ 1.02
CIITA-206ENST00000571190 MAGEB6Q8N7X4 407 aa21.43■■□□□ 1.02
CIITA-206ENST00000571190 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.43■■□□□ 1.02
CIITA-206ENST00000571190 RBPJLQ9UBG7 517 aa21.43■■□□□ 1.02
CIITA-206ENST00000571190 HMGCRP04035 888 aa21.42■■□□□ 1.02
CIITA-206ENST00000571190 HLA-DOAP06340 250 aa21.42■■□□□ 1.02
CIITA-206ENST00000571190 HERVK_113P62684 666 aa21.42■■□□□ 1.02
CIITA-206ENST00000571190 Q3C1V9 767 aa21.42■■□□□ 1.02
CIITA-206ENST00000571190 TATDN1Q6P1N9 297 aa21.42■■□□□ 1.02
CIITA-206ENST00000571190 LOC285556D6RIA3 1793 aa21.41■■□□□ 1.02
CIITA-206ENST00000571190 GH2P01242 217 aa21.41■■□□□ 1.02
CIITA-206ENST00000571190 CAPN2P17655 700 aa21.41■■□□□ 1.02
CIITA-206ENST00000571190 AACSQ86V21 672 aa21.41■■□□□ 1.02
CIITA-206ENST00000571190 DIS3LQ8TF46 1054 aaKnown RBP21.41■■□□□ 1.02
CIITA-206ENST00000571190 TRIB2Q92519 343 aa21.41■■□□□ 1.02
CIITA-206ENST00000571190 TRIM34Q9BYJ4 488 aa21.41■■□□□ 1.02
CIITA-206ENST00000571190 GPRC5AQ8NFJ5 357 aa21.4■■□□□ 1.02
CIITA-206ENST00000571190 PAWRQ96IZ0 340 aaKnown RBP21.4■■□□□ 1.02
CIITA-206ENST00000571190 RIOK1Q9BRS2 568 aaKnown RBP21.4■■□□□ 1.02
CIITA-206ENST00000571190 IL1RAPL2Q9NP60 686 aa21.4■■□□□ 1.02
CIITA-206ENST00000571190 MAST2Q6P0Q8 1798 aa21.39■■□□□ 1.01
CIITA-206ENST00000571190 RPTORQ8N122 1335 aa21.39■■□□□ 1.01
CIITA-206ENST00000571190 CYP2B6P20813 491 aa21.39■■□□□ 1.01
CIITA-206ENST00000571190 USP5P45974 858 aa21.39■■□□□ 1.01
CIITA-206ENST00000571190 MNX1P50219 401 aaPredicted RBP21.39■■□□□ 1.01
CIITA-206ENST00000571190 ERC1Q8IUD2 1116 aa21.39■■□□□ 1.01
CIITA-206ENST00000571190 EHD4Q9H223 541 aa21.39■■□□□ 1.01
CIITA-206ENST00000571190 PORCNQ9H237 461 aa21.39■■□□□ 1.01
CIITA-206ENST00000571190 NR2E3Q9Y5X4 410 aa21.39■■□□□ 1.01
CIITA-206ENST00000571190 PLCD1P51178 756 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 MAP3K12Q12852 859 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 MAP3K21Q5TCX8 1036 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 USP17L2Q6R6M4 530 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 CERS3Q8IU89 383 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 RHPN1Q8TCX5 695 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 USP6NLQ92738 828 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 C12orf42Q96LP6 360 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 SERPINB13Q9UIV8 391 aa21.38■■□□□ 1.01
CIITA-206ENST00000571190 MGAMO43451 1857 aa21.37■■□□□ 1.01
CIITA-206ENST00000571190 ZBED9Q6R2W3 1325 aa21.37■■□□□ 1.01
CIITA-206ENST00000571190 ERVK-9P63128 1117 aa21.37■■□□□ 1.01
CIITA-206ENST00000571190 ERVK-24P63145 666 aa21.37■■□□□ 1.01
CIITA-206ENST00000571190 SIRT2Q8IXJ6 389 aa21.37■■□□□ 1.01
CIITA-206ENST00000571190 HMX1Q9NP08 348 aaPredicted RBP21.37■■□□□ 1.01
CIITA-206ENST00000571190 EVI5O60447 810 aa21.36■■□□□ 1.01
CIITA-206ENST00000571190 CNMDO75829 334 aa21.36■■□□□ 1.01
CIITA-206ENST00000571190 XRCC5P13010 732 aaKnown RBP21.36■■□□□ 1.01
CIITA-206ENST00000571190 SHMT1P34896 483 aa21.36■■□□□ 1.01
CIITA-206ENST00000571190 EVX2Q03828 476 aa21.36■■□□□ 1.01
CIITA-206ENST00000571190 TMED8Q6PL24 325 aaPredicted RBP21.36■■□□□ 1.01
CIITA-206ENST00000571190 TTC6Q86TZ1 520 aa21.36■■□□□ 1.01
CIITA-206ENST00000571190 ACER1Q8TDN7 264 aa21.36■■□□□ 1.01
CIITA-206ENST00000571190 NUDT12Q9BQG2 462 aa21.36■■□□□ 1.01
CIITA-206ENST00000571190 MAPK4P31152 587 aa21.35■■□□□ 1.01
CIITA-206ENST00000571190 GUCY1A2P33402 732 aa21.35■■□□□ 1.01
CIITA-206ENST00000571190 GABPAQ06546 454 aa21.35■■□□□ 1.01
CIITA-206ENST00000571190 ZYXQ15942 572 aaKnown RBP21.35■■□□□ 1.01
CIITA-206ENST00000571190 CERKLQ49MI3 558 aaPredicted RBP21.35■■□□□ 1.01
CIITA-206ENST00000571190 MORN1Q5T089 497 aa21.35■■□□□ 1.01
CIITA-206ENST00000571190 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
CIITA-206ENST00000571190 NECAB2Q7Z6G3 386 aa21.35■■□□□ 1.01
CIITA-206ENST00000571190 ANKLE1Q8NAG6 615 aa21.35■■□□□ 1.01
CIITA-206ENST00000571190 PAGR1Q9BTK6 254 aa21.35■■□□□ 1.01
CIITA-206ENST00000571190 PRKAR2AP13861 404 aaKnown RBP21.34■■□□□ 1.01
CIITA-206ENST00000571190 PDE6AP16499 860 aa21.34■■□□□ 1.01
CIITA-206ENST00000571190 RAB3GAP1Q15042 981 aa21.34■■□□□ 1.01
CIITA-206ENST00000571190 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
CIITA-206ENST00000571190 GPR142Q7Z601 462 aa21.34■■□□□ 1.01
CIITA-206ENST00000571190 GTF3C2Q8WUA4 911 aaPredicted RBP21.34■■□□□ 1.01
CIITA-206ENST00000571190 SOCS4Q8WXH5 440 aa21.34■■□□□ 1.01
CIITA-206ENST00000571190 KIAA1683Q9H0B3 1180 aa21.34■■□□□ 1.01
CIITA-206ENST00000571190 OGDHLQ9ULD0 1010 aa21.34■■□□□ 1.01
CIITA-206ENST00000571190 MAGEB6P1A0A0J9YX57 407 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 TCRBV5S4A2TA0A5A2 114 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 USP17L15C9J2P7 530 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 USP17L13C9JLJ4 530 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 USP17L11C9JVI0 530 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 USP17L18D6R9N7 530 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 USP17L22D6RA61 530 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 USP17L17D6RBQ6 530 aa21.33■■□□□ 1.01
CIITA-206ENST00000571190 USP17L19D6RCP7 530 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms